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The map label for this gene is 17228000

Identifier: 17228000

GI number: 17228000

Start: 599141

End: 599608

Strand: Direct

Name: 17228000

Synonym: alr0504

Alternate gene names: NA

Gene position: 599141-599608 (Clockwise)

Preceding gene: 17227999

Following gene: 17228001

Centisome position: 9.34

GC content: 32.91

Gene sequence:

>468_bases
ATGATATTCATGAATAATTTTATAGATAAAAAGTTTATTGACTCTAATATTTGGCTGTATCGGTTTCTTCATGATCCAAA
AGTAGATCCTCAAGTGCAGCAATTAAAAAGAAGTATGGCTATTAATTTAACTCAAGCTGTTGATCGCAGTATTGTAGTTA
GCACTCAGGTTATCACTGAAACTTGTGCTGTACTCAAACGGAAAACAGGAATTTCTGAACAGAATATTTTAGAGTTAGTA
GAGGAGTTTGAAGAACAGTGTGAAATTGTCAACCTGACAACAAGTGAGATCAAAGAAGCTTGTCGATTAAGAGATAAATA
TTCTTTTTCGTATTGGGATAGTCTTGTTATTGCTACTGCTCTAAAGTCTCAGGCTAAGGTTCTATATTCGGAAGATATGC
AAAATGGATTATTGATTGAAAATCAATTAACAATTATCAATCCGTTTGTAGGATCGGGAAATAGGTAA

Upstream 100 bases:

>100_bases
AATTTAATTGAGGTAATTATTAAGCCTAAGCCTTCTCGTTTGATGGATCGTCTTGCAGAAAATCCTTTAACGGCTGTGGG
TTGGCGTGATTTGTCAAGAG

Downstream 100 bases:

>100_bases
TGGGTAAGAAGGTAAAGAAAAATGTGCCTCAGTTGCGGTTTCCTGAGTTTGTGGAAGTTCTCAAACTTACATATCTTGGT
GAAATATTAGACTTCAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: PilT Protein Domain Protein; PIN Domain Protein; PilT Protein-Like Protein; PilT Protein-Like

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MIFMNNFIDKKFIDSNIWLYRFLHDPKVDPQVQQLKRSMAINLTQAVDRSIVVSTQVITETCAVLKRKTGISEQNILELV
EEFEEQCEIVNLTTSEIKEACRLRDKYSFSYWDSLVIATALKSQAKVLYSEDMQNGLLIENQLTIINPFVGSGNR

Sequences:

>Translated_155_residues
MIFMNNFIDKKFIDSNIWLYRFLHDPKVDPQVQQLKRSMAINLTQAVDRSIVVSTQVITETCAVLKRKTGISEQNILELV
EEFEEQCEIVNLTTSEIKEACRLRDKYSFSYWDSLVIATALKSQAKVLYSEDMQNGLLIENQLTIINPFVGSGNR
>Mature_155_residues
MIFMNNFIDKKFIDSNIWLYRFLHDPKVDPQVQQLKRSMAINLTQAVDRSIVVSTQVITETCAVLKRKTGISEQNILELV
EEFEEQCEIVNLTTSEIKEACRLRDKYSFSYWDSLVIATALKSQAKVLYSEDMQNGLLIENQLTIINPFVGSGNR

Specific function: Unknown

COG id: COG5573

COG function: function code R; Predicted nucleic-acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17869; Mature: 17869

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFMNNFIDKKFIDSNIWLYRFLHDPKVDPQVQQLKRSMAINLTQAVDRSIVVSTQVITE
CEECCCHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
TCAVLKRKTGISEQNILELVEEFEEQCEIVNLTTSEIKEACRLRDKYSFSYWDSLVIATA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
LKSQAKVLYSEDMQNGLLIENQLTIINPFVGSGNR
HHHHHHHHHHHHCCCCEEEECCEEEECCCCCCCCC
>Mature Secondary Structure
MIFMNNFIDKKFIDSNIWLYRFLHDPKVDPQVQQLKRSMAINLTQAVDRSIVVSTQVITE
CEECCCHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
TCAVLKRKTGISEQNILELVEEFEEQCEIVNLTTSEIKEACRLRDKYSFSYWDSLVIATA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
LKSQAKVLYSEDMQNGLLIENQLTIINPFVGSGNR
HHHHHHHHHHHHCCCCEEEECCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA