| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is thrB [H]
Identifier: 17227842
GI number: 17227842
Start: 397530
End: 398114
Strand: Direct
Name: thrB [H]
Synonym: alr0346
Alternate gene names: 17227842
Gene position: 397530-398114 (Clockwise)
Preceding gene: 17227840
Following gene: 17227843
Centisome position: 6.2
GC content: 50.94
Gene sequence:
>585_bases GTGGCGGCGAATCGATTGGCTGGTGAGCCTTTGTCTCAGGCGCAGGTGATGGCATTAGCGATCGCCATCGAAGGACATCC TGATAATGTCGTACCCGCTTTGTTGGGGGGATGTCGTCTGGCGGCTACTGGTGCTAGTGGTTGGGAAATTTGTGATGTTC CCTGGCATAGTCATATTGTCCCAGTACTGGCAATTCCCGATTTTGAATTGTCCACCTCAGAGGCGCGGCGAGTTTTACCA ACAGAATATAGTCGTGCAGATGCGATTTTTAATACTGCCCATTTGGGGTTATTGTTGCGCGGCTTGGAAACAGGTAAGGG AGAATGGTTAAGGGCAGCTTTACAAGATAAGTTACATCAGCCTTATCGCCAAGCTTTAATTCCTGGTTACGATGCTGTGA ATACTGCGGCTGTAGCTGCTGGTGCTTACGGTATGGTGATTAGTGGCGCGGGGCCGACTTTGTTGGCTTTAGCGGATGTG TCTCATGCGGCAGCTGTTGAGGCGGCAATGTCCACAGCTTGGCAAGAAGCAGGAATTACGGCTGTAGTGCGATCGCTTGC TCTCGATACTCATGGCGCAACTTAA
Upstream 100 bases:
>100_bases TATAGATCAGCCAGCGCCAGGGGTAAAAATCGAAATTGAGTTGGGTGTACCACTGGCGAGGGGTTTGGGTAGTTCAGCCA CGGCGATTGTTGGGGGTTTG
Downstream 100 bases:
>100_bases CAATTCAAAATTCAACATGAAAGAACTTAATCCCAGCTTGCCTTTAAAGCAAATTCAGTCGGAGATGACAGCACTCAAGT CGCAAATTCAAGTGCTGGAG
Product: homoserine kinase
Products: NA
Alternate protein names: HK; HSK [H]
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MAANRLAGEPLSQAQVMALAIAIEGHPDNVVPALLGGCRLAATGASGWEICDVPWHSHIVPVLAIPDFELSTSEARRVLP TEYSRADAIFNTAHLGLLLRGLETGKGEWLRAALQDKLHQPYRQALIPGYDAVNTAAVAAGAYGMVISGAGPTLLALADV SHAAAVEAAMSTAWQEAGITAVVRSLALDTHGAT
Sequences:
>Translated_194_residues MAANRLAGEPLSQAQVMALAIAIEGHPDNVVPALLGGCRLAATGASGWEICDVPWHSHIVPVLAIPDFELSTSEARRVLP TEYSRADAIFNTAHLGLLLRGLETGKGEWLRAALQDKLHQPYRQALIPGYDAVNTAAVAAGAYGMVISGAGPTLLALADV SHAAAVEAAMSTAWQEAGITAVVRSLALDTHGAT >Mature_193_residues AANRLAGEPLSQAQVMALAIAIEGHPDNVVPALLGGCRLAATGASGWEICDVPWHSHIVPVLAIPDFELSTSEARRVLPT EYSRADAIFNTAHLGLLLRGLETGKGEWLRAALQDKLHQPYRQALIPGYDAVNTAAVAAGAYGMVISGAGPTLLALADVS HAAAVEAAMSTAWQEAGITAVVRSLALDTHGAT
Specific function: Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate [H]
COG id: COG0083
COG function: function code E; Homoserine kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GHMP kinase family. Homoserine kinase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786184, Length=202, Percent_Identity=33.6633663366337, Blast_Score=97, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6321814, Length=195, Percent_Identity=31.2820512820513, Blast_Score=90, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006204 - InterPro: IPR013750 - InterPro: IPR006203 - InterPro: IPR000870 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF08544 GHMP_kinases_C; PF00288 GHMP_kinases_N [H]
EC number: =2.7.1.39 [H]
Molecular weight: Translated: 20134; Mature: 20003
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAANRLAGEPLSQAQVMALAIAIEGHPDNVVPALLGGCRLAATGASGWEICDVPWHSHIV CCCCCCCCCCCHHHHEEEEEEEEECCCCCHHHHHHCCCEEEECCCCCCEEECCCCCCCEE PVLAIPDFELSTSEARRVLPTEYSRADAIFNTAHLGLLLRGLETGKGEWLRAALQDKLHQ EEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH PYRQALIPGYDAVNTAAVAAGAYGMVISGAGPTLLALADVSHAAAVEAAMSTAWQEAGIT HHHHHHCCCCCHHHHHHHHCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHH AVVRSLALDTHGAT HHHHHHHHHCCCCC >Mature Secondary Structure AANRLAGEPLSQAQVMALAIAIEGHPDNVVPALLGGCRLAATGASGWEICDVPWHSHIV CCCCCCCCCCHHHHEEEEEEEEECCCCCHHHHHHCCCEEEECCCCCCEEECCCCCCCEE PVLAIPDFELSTSEARRVLPTEYSRADAIFNTAHLGLLLRGLETGKGEWLRAALQDKLHQ EEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH PYRQALIPGYDAVNTAAVAAGAYGMVISGAGPTLLALADVSHAAAVEAAMSTAWQEAGIT HHHHHHCCCCCHHHHHHHHCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHH AVVRSLALDTHGAT HHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA