| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17227763
Identifier: 17227763
GI number: 17227763
Start: 286425
End: 287651
Strand: Direct
Name: 17227763
Synonym: alr0267
Alternate gene names: NA
Gene position: 286425-287651 (Clockwise)
Preceding gene: 17227760
Following gene: 17227772
Centisome position: 4.47
GC content: 44.25
Gene sequence:
>1227_bases ATGCCAGAAACGCAAAGCTTTTCCAAGAGAATAGATAATTCGCTTAATACATCTTTTGCAAGATCAGCATCTTTGGTATC AAGTGCTTATGTAAGTGATTTAAATACGGATCTACCATCATCTAGTAGTTCTGCAACAACACAAGTAGACTTGCCAATTT CCATTCCTGGTTTGAGTGCTAACCCAAATCCTAATCCTTACTTAACTAGCGCAGCGATTTCACCTGATTTCAACGGCGAT GGTAAGGCAGATAAAATTTGGGTTAATACTCAAACAGGTGAGATTAGAGTGAGGTTGATGAACGGAACAGTCACTCAAGA AGAAGCTTCTCTAGGAACATTTGACCTGAGCGTCTGGACTTATAAAATCGCTGACTTTAACAGTGATGGCAAGACTGACT TCCTGTTACGGAACAATGCAACAGGTGAGAATGCGATCGCGATCATGGATGGAGCTAGAGTTGCTAACTTTGTTTATCTA GACAAAGTTGATCCAGGTTGGAATGCTAGCATCGGTGATTTTAACGGCGATCGCAAAACCGACATCCACTGGAATAATAC TCAAACAGGTGAAAATGCGATTTGGCTGATGGATGGCACAACCGTTGTCAGTGCCAATGTTCTGGATACCACAACCCCAG GGTTGACTGCCACTATTGTTGACTTCGACGGAAACGGTAAGAGTGATGTCTTCTGGCGAGATACAACCACGGGTGCAAAC TCCGTTTGGTTTATGGATGGTATCCAAGCTACCAAGTACGATCTACAAGCACAAGACGCATCTTGGACTTACAGCCTTGG CGATTTCAACGGTGACTTCACTACCGATCTTCTCTGGCGTAATACCGTCACCGGCGAAAACAAAATTTGGACAATGAATG GCATTTTTGTCACTGAAGGTACTTTAAACACCCTCGGTTCTGATTGGACAGCCAGCATTGGTGATTTCAATGGTGATGGC CGCACCGATATCTTCTGGAACAACACTACAACAGGCGAGAACACTGCTTGGTTGATGAATGGTACATCCGTTACCAGTGA AGCCTTTCTTCCAAGTAGAACTCCAGGTTCTAAGGCATATATTGGCGATTATAACAGCGATGGTAAGTCTGATATTTACT GGCGCGATCAGGCAACCGGTACAGATGCCATTTGGACCATGGATGGTACCTTGGCTACTGAAACTCCTGTTACAGATGCT CTGACTCCAGAGTGGTACACAGCTTAG
Upstream 100 bases:
>100_bases GATACAGTAATTTCTAAACTTAAAATAATGTTATTAGCTAACAGAAGCCAACATGAATTATCAGCTAAAACTTTTAAGAC AACAAGTTTAAGAAACCACC
Downstream 100 bases:
>100_bases GGGTGTAGAGGGGTAGGGGTGTAGGGGTGTAAGGGAGTGAAAAAGCAGGGGAGCAGGGGAGCAGGGGAGAAAAACCACCC ACAAGAGGCGAGGTTTTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MPETQSFSKRIDNSLNTSFARSASLVSSAYVSDLNTDLPSSSSSATTQVDLPISIPGLSANPNPNPYLTSAAISPDFNGD GKADKIWVNTQTGEIRVRLMNGTVTQEEASLGTFDLSVWTYKIADFNSDGKTDFLLRNNATGENAIAIMDGARVANFVYL DKVDPGWNASIGDFNGDRKTDIHWNNTQTGENAIWLMDGTTVVSANVLDTTTPGLTATIVDFDGNGKSDVFWRDTTTGAN SVWFMDGIQATKYDLQAQDASWTYSLGDFNGDFTTDLLWRNTVTGENKIWTMNGIFVTEGTLNTLGSDWTASIGDFNGDG RTDIFWNNTTTGENTAWLMNGTSVTSEAFLPSRTPGSKAYIGDYNSDGKSDIYWRDQATGTDAIWTMDGTLATETPVTDA LTPEWYTA
Sequences:
>Translated_408_residues MPETQSFSKRIDNSLNTSFARSASLVSSAYVSDLNTDLPSSSSSATTQVDLPISIPGLSANPNPNPYLTSAAISPDFNGD GKADKIWVNTQTGEIRVRLMNGTVTQEEASLGTFDLSVWTYKIADFNSDGKTDFLLRNNATGENAIAIMDGARVANFVYL DKVDPGWNASIGDFNGDRKTDIHWNNTQTGENAIWLMDGTTVVSANVLDTTTPGLTATIVDFDGNGKSDVFWRDTTTGAN SVWFMDGIQATKYDLQAQDASWTYSLGDFNGDFTTDLLWRNTVTGENKIWTMNGIFVTEGTLNTLGSDWTASIGDFNGDG RTDIFWNNTTTGENTAWLMNGTSVTSEAFLPSRTPGSKAYIGDYNSDGKSDIYWRDQATGTDAIWTMDGTLATETPVTDA LTPEWYTA >Mature_407_residues PETQSFSKRIDNSLNTSFARSASLVSSAYVSDLNTDLPSSSSSATTQVDLPISIPGLSANPNPNPYLTSAAISPDFNGDG KADKIWVNTQTGEIRVRLMNGTVTQEEASLGTFDLSVWTYKIADFNSDGKTDFLLRNNATGENAIAIMDGARVANFVYLD KVDPGWNASIGDFNGDRKTDIHWNNTQTGENAIWLMDGTTVVSANVLDTTTPGLTATIVDFDGNGKSDVFWRDTTTGANS VWFMDGIQATKYDLQAQDASWTYSLGDFNGDFTTDLLWRNTVTGENKIWTMNGIFVTEGTLNTLGSDWTASIGDFNGDGR TDIFWNNTTTGENTAWLMNGTSVTSEAFLPSRTPGSKAYIGDYNSDGKSDIYWRDQATGTDAIWTMDGTLATETPVTDAL TPEWYTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44342; Mature: 44211
Theoretical pI: Translated: 3.92; Mature: 3.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPETQSFSKRIDNSLNTSFARSASLVSSAYVSDLNTDLPSSSSSATTQVDLPISIPGLSA CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCC NPNPNPYLTSAAISPDFNGDGKADKIWVNTQTGEIRVRLMNGTVTQEEASLGTFDLSVWT CCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCEEEEEEECCCEECCCCCCCEEEEEEEE YKIADFNSDGKTDFLLRNNATGENAIAIMDGARVANFVYLDKVDPGWNASIGDFNGDRKT EEEEECCCCCCEEEEEECCCCCCCEEEEEECCEEEEEEEEECCCCCCCCCCCCCCCCCEE DIHWNNTQTGENAIWLMDGTTVVSANVLDTTTPGLTATIVDFDGNGKSDVFWRDTTTGAN EEEECCCCCCCCEEEEEECCEEEEEEEEECCCCCCEEEEEEECCCCCCCEEEEECCCCCC SVWFMDGIQATKYDLQAQDASWTYSLGDFNGDFTTDLLWRNTVTGENKIWTMNGIFVTEG EEEEECCCEEEEEEEEECCCCEEEEECCCCCCEEEEEEEECCCCCCCEEEEECCEEEECC TLNTLGSDWTASIGDFNGDGRTDIFWNNTTTGENTAWLMNGTSVTSEAFLPSRTPGSKAY CHHHCCCCCEEECCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEE IGDYNSDGKSDIYWRDQATGTDAIWTMDGTLATETPVTDALTPEWYTA EECCCCCCCCCEEECCCCCCCCEEEEECCCEECCCCCCCCCCCCCCCC >Mature Secondary Structure PETQSFSKRIDNSLNTSFARSASLVSSAYVSDLNTDLPSSSSSATTQVDLPISIPGLSA CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCC NPNPNPYLTSAAISPDFNGDGKADKIWVNTQTGEIRVRLMNGTVTQEEASLGTFDLSVWT CCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCEEEEEEECCCEECCCCCCCEEEEEEEE YKIADFNSDGKTDFLLRNNATGENAIAIMDGARVANFVYLDKVDPGWNASIGDFNGDRKT EEEEECCCCCCEEEEEECCCCCCCEEEEEECCEEEEEEEEECCCCCCCCCCCCCCCCCEE DIHWNNTQTGENAIWLMDGTTVVSANVLDTTTPGLTATIVDFDGNGKSDVFWRDTTTGAN EEEECCCCCCCCEEEEEECCEEEEEEEEECCCCCCEEEEEEECCCCCCCEEEEECCCCCC SVWFMDGIQATKYDLQAQDASWTYSLGDFNGDFTTDLLWRNTVTGENKIWTMNGIFVTEG EEEEECCCEEEEEEEEECCCCEEEEECCCCCCEEEEEEEECCCCCCCEEEEECCEEEECC TLNTLGSDWTASIGDFNGDGRTDIFWNNTTTGENTAWLMNGTSVTSEAFLPSRTPGSKAY CHHHCCCCCEEECCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEE IGDYNSDGKSDIYWRDQATGTDAIWTMDGTLATETPVTDALTPEWYTA EECCCCCCCCCEEECCCCCCCCEEEEECCCEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA