| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17227751
Identifier: 17227751
GI number: 17227751
Start: 275105
End: 276580
Strand: Direct
Name: 17227751
Synonym: alr0255
Alternate gene names: NA
Gene position: 275105-276580 (Clockwise)
Preceding gene: 17227748
Following gene: 17227753
Centisome position: 4.29
GC content: 42.82
Gene sequence:
>1476_bases ATGTCTTACGTCTCCCTGTTAAAAAATATACCAGACATCTTAGGACAGCCAACTGGGATAGCTGCAATAGCCTCTCTTGG CATCCACGGTGCTATTGCGTTGATTGTGCCATTGATGCCAGTTGATGCTAATAAATCTAATGAATCATCACCAAAATCAG TTGGTGTTTTAGAACTCAGTCAAGCAGACCAAAGCCGTTTACCACAAAGCGTAGATCCAAATCAAGTTGGTCTGCAAGCA CAACTACCTCTACAATCACAATTTCCCCAACAACCACAACTAGGTAATATTCCTAGTTTTAACAACCAGACAGCTATTTT ACCTCCTTTACCGCCACCGATTACCCCACCGATTTCACTACCACCCGTTTATACAACCCCTGATAATTATCGGATTTCCT CCTTACCCAGAAGTCAACCTCTGCGCCAATTATCCAGAAGGGATTTGCGATTTGATAACTCTGGCTTTAGAGCTGTTGGA GAAAAATTTACCCCAACAACCCCTCCCAGTTTTAATGAGAGGGAAGTAATACCAGAAACATCTAGGACTCTACCTGTAGA TAGATTACCGGAATTAAACGCGGCAAAACTCCCCGATGATTTACCGCCGAATCTCCCCAGTAATACAACTCCACCAGTGG CTGATTCTAGTAATGATGCAGCGACTGTGGCTCCCATAGAACCCCAGGTAGCTCCTATTGTCCAAGCGCCCAAAGTGAGT GATGATTTAGCTTTTGCTAACGAAAGTATTCCCAAATGGCAGCAAGGCTCTACGCTCAAAACACCTGAATTACCCTGGCA AAATCCTCAACAAAGATCAGAACCCGGACTAATTGCTCAGGTAAACTCATACGAAGACCTACGTAAAGCTCTTCAGCAAG CGTATCCAAACTCCCAAGAAAAAGCGGTTATTCGCAGCACAGTTGCGACAGATAAACCAGGTATTGAAGGTACTGTTTTA GGTTTCTTGGTAGTTGATACAGAAGGCAAAGTTTTAGATATCAAGTTTCAAGACAAAACTGTGTCTCCTGACTTGCAATT AAAAGCAAGGGAATATTTTACAAAAAATGCCCCTAAGGGAGACAGACAAATTAGTCGTTATCCTTTCAGCTTGAGTATCC AAAACAACAGCAATAATACTGCGGTGACTGAAGATAAAAATCCTGGTGTGGTTATTCCGCAACCTCCTTCGACTCCGTTA GTCAATCGTACTCAACCAGCAACAGCACCAATCACTGCTCCTAAACCTTTACCACAACTACAACTGAGGGAAGCTAATCC TAAACCTTCAACACAAATACAAATCAAAAAAGACCAACCCACCCAAACACCAACTGTTGAGGCTTCACCTGAGACGACAT CTGGCAAAAATCAGCTATCTTCAACGGTAGAATCTAGTCAAACACTTCTAGAAAAGCTGCGTGAAGCTAGACAACAGCAA CAGCAAAGACAAGAGCCTAATTCTTCAGACAGATAA
Upstream 100 bases:
>100_bases ACATGGACAGTTATCATTTTTAAAAGGGCGCATTTATTGCATTCAAGATAATATTTTTCTGCTAGTCAACCGCAACCGAG CCGAGTGAACGATAACAGTT
Downstream 100 bases:
>100_bases GGCCAGGGAGTGATGAGTAATAATTACTCTCCGATCTCCCACTAACTGACATCATGCACCAGACTATGAAAATCGCGGCT ACACGAATTAAGCTTGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 491; Mature: 490
Protein sequence:
>491_residues MSYVSLLKNIPDILGQPTGIAAIASLGIHGAIALIVPLMPVDANKSNESSPKSVGVLELSQADQSRLPQSVDPNQVGLQA QLPLQSQFPQQPQLGNIPSFNNQTAILPPLPPPITPPISLPPVYTTPDNYRISSLPRSQPLRQLSRRDLRFDNSGFRAVG EKFTPTTPPSFNEREVIPETSRTLPVDRLPELNAAKLPDDLPPNLPSNTTPPVADSSNDAATVAPIEPQVAPIVQAPKVS DDLAFANESIPKWQQGSTLKTPELPWQNPQQRSEPGLIAQVNSYEDLRKALQQAYPNSQEKAVIRSTVATDKPGIEGTVL GFLVVDTEGKVLDIKFQDKTVSPDLQLKAREYFTKNAPKGDRQISRYPFSLSIQNNSNNTAVTEDKNPGVVIPQPPSTPL VNRTQPATAPITAPKPLPQLQLREANPKPSTQIQIKKDQPTQTPTVEASPETTSGKNQLSSTVESSQTLLEKLREARQQQ QQRQEPNSSDR
Sequences:
>Translated_491_residues MSYVSLLKNIPDILGQPTGIAAIASLGIHGAIALIVPLMPVDANKSNESSPKSVGVLELSQADQSRLPQSVDPNQVGLQA QLPLQSQFPQQPQLGNIPSFNNQTAILPPLPPPITPPISLPPVYTTPDNYRISSLPRSQPLRQLSRRDLRFDNSGFRAVG EKFTPTTPPSFNEREVIPETSRTLPVDRLPELNAAKLPDDLPPNLPSNTTPPVADSSNDAATVAPIEPQVAPIVQAPKVS DDLAFANESIPKWQQGSTLKTPELPWQNPQQRSEPGLIAQVNSYEDLRKALQQAYPNSQEKAVIRSTVATDKPGIEGTVL GFLVVDTEGKVLDIKFQDKTVSPDLQLKAREYFTKNAPKGDRQISRYPFSLSIQNNSNNTAVTEDKNPGVVIPQPPSTPL VNRTQPATAPITAPKPLPQLQLREANPKPSTQIQIKKDQPTQTPTVEASPETTSGKNQLSSTVESSQTLLEKLREARQQQ QQRQEPNSSDR >Mature_490_residues SYVSLLKNIPDILGQPTGIAAIASLGIHGAIALIVPLMPVDANKSNESSPKSVGVLELSQADQSRLPQSVDPNQVGLQAQ LPLQSQFPQQPQLGNIPSFNNQTAILPPLPPPITPPISLPPVYTTPDNYRISSLPRSQPLRQLSRRDLRFDNSGFRAVGE KFTPTTPPSFNEREVIPETSRTLPVDRLPELNAAKLPDDLPPNLPSNTTPPVADSSNDAATVAPIEPQVAPIVQAPKVSD DLAFANESIPKWQQGSTLKTPELPWQNPQQRSEPGLIAQVNSYEDLRKALQQAYPNSQEKAVIRSTVATDKPGIEGTVLG FLVVDTEGKVLDIKFQDKTVSPDLQLKAREYFTKNAPKGDRQISRYPFSLSIQNNSNNTAVTEDKNPGVVIPQPPSTPLV NRTQPATAPITAPKPLPQLQLREANPKPSTQIQIKKDQPTQTPTVEASPETTSGKNQLSSTVESSQTLLEKLREARQQQQ QRQEPNSSDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53505; Mature: 53374
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYVSLLKNIPDILGQPTGIAAIASLGIHGAIALIVPLMPVDANKSNESSPKSVGVLELS CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEC QADQSRLPQSVDPNQVGLQAQLPLQSQFPQQPQLGNIPSFNNQTAILPPLPPPITPPISL CCHHHHCCCCCCCCCCCEEEECCHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC PPVYTTPDNYRISSLPRSQPLRQLSRRDLRFDNSGFRAVGEKFTPTTPPSFNEREVIPET CCEEECCCCCEECCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC SRTLPVDRLPELNAAKLPDDLPPNLPSNTTPPVADSSNDAATVAPIEPQVAPIVQAPKVS CCCCCHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC DDLAFANESIPKWQQGSTLKTPELPWQNPQQRSEPGLIAQVNSYEDLRKALQQAYPNSQE CHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEECCHHHHHHHHHHHCCCCHH KAVIRSTVATDKPGIEGTVLGFLVVDTEGKVLDIKFQDKTVSPDLQLKAREYFTKNAPKG HHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCEEHHHHHHHCCCCCC DRQISRYPFSLSIQNNSNNTAVTEDKNPGVVIPQPPSTPLVNRTQPATAPITAPKPLPQL CCHHHHCCEEEEEECCCCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCH QLREANPKPSTQIQIKKDQPTQTPTVEASPETTSGKNQLSSTVESSQTLLEKLREARQQQ HEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QQRQEPNSSDR HHHHCCCCCCC >Mature Secondary Structure SYVSLLKNIPDILGQPTGIAAIASLGIHGAIALIVPLMPVDANKSNESSPKSVGVLELS CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEC QADQSRLPQSVDPNQVGLQAQLPLQSQFPQQPQLGNIPSFNNQTAILPPLPPPITPPISL CCHHHHCCCCCCCCCCCEEEECCHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC PPVYTTPDNYRISSLPRSQPLRQLSRRDLRFDNSGFRAVGEKFTPTTPPSFNEREVIPET CCEEECCCCCEECCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC SRTLPVDRLPELNAAKLPDDLPPNLPSNTTPPVADSSNDAATVAPIEPQVAPIVQAPKVS CCCCCHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC DDLAFANESIPKWQQGSTLKTPELPWQNPQQRSEPGLIAQVNSYEDLRKALQQAYPNSQE CHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEECCHHHHHHHHHHHCCCCHH KAVIRSTVATDKPGIEGTVLGFLVVDTEGKVLDIKFQDKTVSPDLQLKAREYFTKNAPKG HHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCEEHHHHHHHCCCCCC DRQISRYPFSLSIQNNSNNTAVTEDKNPGVVIPQPPSTPLVNRTQPATAPITAPKPLPQL CCHHHHCCEEEEEECCCCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCH QLREANPKPSTQIQIKKDQPTQTPTVEASPETTSGKNQLSSTVESSQTLLEKLREARQQQ HEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QQRQEPNSSDR HHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA