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The map label for this gene is dnaJ [C]

Identifier: 17227742

GI number: 17227742

Start: 263654

End: 264274

Strand: Direct

Name: dnaJ [C]

Synonym: alr0246

Alternate gene names: 17227742

Gene position: 263654-264274 (Clockwise)

Preceding gene: 17227739

Following gene: 17227743

Centisome position: 4.11

GC content: 41.71

Gene sequence:

>621_bases
GTGTGCGCGATGTCTAACGACAAGCCGCGAGATGGTTTACAACTTGATATCAGTCATGCTTATGAAATTCTCGGTTTAAA
ACCTGGTGCATCGCAGGTGGAAGTAAAGCAAGCTTATCGGAAGCTAGTTAAAATTTGGCATCCCGATCGCTTTGTTGATA
ACGAGCAAAAACAGCAAGCCGAGACAAAAATTAAACGAATCAACGCCGCTTACAACAGAGTTAAGTCGGTGACACCAACT
GTTGAGAAGCCAGCTTCAGCTACGCCTTCACCGAAAAAGCCTGTAAAAGCATCTGTTAATCGTTGGGGTGCAGAAACTTT
CTACAACTGGGGTGTAGAAAGTGTAGACAAAAAAGAATATGAAGAAGCGATCGCCTATTTTACCCAAGCAATTCGCCTCA
ATCCCAGCTACATTGCAGCTTACAAATACCGAGGATTCATTTGCTCTGAATTGGGATATGAATATAGAGCTACTTCCGAT
TTAAATAAAGCCGCACAGTTAGAAGGGAAAATTCCCAAAGCTGCTTACGTCTCATCGCCAAGATATAAAACCAAGCCTAA
ATCTTGGCTCGCAAGATTATGCCAGAAAATTAAAAGGCTACTAAAGCTAAATAGATATTGA

Upstream 100 bases:

>100_bases
AAGTCGGGAATCTGGTAATTCACAAGCGATTTTAGAGATTCTATCTCATAAAACCTTTTAAGAGTTTAGTTAAGATAGAT
TTACGTAGTTATATTTTTTA

Downstream 100 bases:

>100_bases
GTAATAATTCAGGATTCATAAAACAACAGTAGGTATTTTTATAAAGTTACTAAAATTTAAGTTTGTCCTCCTGTGACAAT
TACTGCTCATGATGAGCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: DNAJ Domain Protein

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MCAMSNDKPRDGLQLDISHAYEILGLKPGASQVEVKQAYRKLVKIWHPDRFVDNEQKQQAETKIKRINAAYNRVKSVTPT
VEKPASATPSPKKPVKASVNRWGAETFYNWGVESVDKKEYEEAIAYFTQAIRLNPSYIAAYKYRGFICSELGYEYRATSD
LNKAAQLEGKIPKAAYVSSPRYKTKPKSWLARLCQKIKRLLKLNRY

Sequences:

>Translated_206_residues
MCAMSNDKPRDGLQLDISHAYEILGLKPGASQVEVKQAYRKLVKIWHPDRFVDNEQKQQAETKIKRINAAYNRVKSVTPT
VEKPASATPSPKKPVKASVNRWGAETFYNWGVESVDKKEYEEAIAYFTQAIRLNPSYIAAYKYRGFICSELGYEYRATSD
LNKAAQLEGKIPKAAYVSSPRYKTKPKSWLARLCQKIKRLLKLNRY
>Mature_206_residues
MCAMSNDKPRDGLQLDISHAYEILGLKPGASQVEVKQAYRKLVKIWHPDRFVDNEQKQQAETKIKRINAAYNRVKSVTPT
VEKPASATPSPKKPVKASVNRWGAETFYNWGVESVDKKEYEEAIAYFTQAIRLNPSYIAAYKYRGFICSELGYEYRATSD
LNKAAQLEGKIPKAAYVSSPRYKTKPKSWLARLCQKIKRLLKLNRY

Specific function: Interacts With Dnak To Disassemble A Protein Complex At The Phage Lambda Origin Of Replication. Stimulates, Jointly With Grpe, The Atpase Activity Of Dnak. [C]

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23613; Mature: 23613

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCAMSNDKPRDGLQLDISHAYEILGLKPGASQVEVKQAYRKLVKIWHPDRFVDNEQKQQA
CCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCHHHHHH
ETKIKRINAAYNRVKSVTPTVEKPASATPSPKKPVKASVNRWGAETFYNWGVESVDKKEY
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHH
EEAIAYFTQAIRLNPSYIAAYKYRGFICSELGYEYRATSDLNKAAQLEGKIPKAAYVSSP
HHHHHHHHHHHHCCCHHEEHHHHCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHCCCC
RYKTKPKSWLARLCQKIKRLLKLNRY
CCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MCAMSNDKPRDGLQLDISHAYEILGLKPGASQVEVKQAYRKLVKIWHPDRFVDNEQKQQA
CCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCHHHHHH
ETKIKRINAAYNRVKSVTPTVEKPASATPSPKKPVKASVNRWGAETFYNWGVESVDKKEY
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHH
EEAIAYFTQAIRLNPSYIAAYKYRGFICSELGYEYRATSDLNKAAQLEGKIPKAAYVSSP
HHHHHHHHHHHHCCCHHEEHHHHCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHCCCC
RYKTKPKSWLARLCQKIKRLLKLNRY
CCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA