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The map label for this gene is perM [C]

Identifier: 17227738

GI number: 17227738

Start: 260010

End: 261047

Strand: Direct

Name: perM [C]

Synonym: alr0242

Alternate gene names: 17227738

Gene position: 260010-261047 (Clockwise)

Preceding gene: 17227737

Following gene: 17227739

Centisome position: 4.05

GC content: 35.65

Gene sequence:

>1038_bases
ATGAGCGGTATTGAAGCCAAAAATCTGTGGCATCGATTAAATAATTTGGCACTAGTCCGCTTTTTGCTGTTAGTTGCGGC
TGGTTGGGCGATCGTACAGCTTCTAGCTTACTTTGAGACAGTAATTATAATTTTTACTTTTGCAGCTATTTTGGCTTTTT
TACTGAGCTATCCAGTGCAATGGCTACGCCGTTTTCTACCCCACAGTGTTGCAGTTGTCGTAGTTTTCCTAATCAGCATA
GTGATTTTAGGAGGATTACTCATTACAGTTGGTGTAGCACTTTTATCTCAGGGTCAACAATTAATTGACAGTATATCGGC
TTTCTTAACTTCTTTGTTACCTTTTTTGGAAAGAATAGAGAGATTGTTAAGTAACCGCAATCTACAAATAGATTTAAGTG
TAATTCAAGAACAATTGCGAACCCAAGCTGTATCAACACTAGTTACCAGTTTAGCAATTGTGCAACAATTTCTCACTAAT
TTTGTGACATTTATCTTAATTGCCGTCGTAGCTTTTTTCATGCTACTAGATGGTGAAAAACTTTGGAATTTTATTCTCAA
AATAGTTCCCCAAAAACGCCGCATTAGATTTACAAATATTATGCGGCGTAGTTTTCTAGGATTTTTTCGCGGTCAGTTAT
TATTGTGCTTGTTCCTGACAAGTTCAACATTTATTATTTTCTTATTATTACAAGTGCCTTTTGCTTTAATACTGTCTGTA
ATAGTAGGAATACTAGATATAATTCCTGGTATTGGAGCTACCTTAGGTGTGGGAACAATTACTTTAATTGTCTTATCTCA
AGATGTTTGGTTAGCATTAAAAGTCTTAGCCGCTTGCGTAGTTCTCCAGCAAATTCAAGATAATTTGATTTCCCCTCGTA
TTATGCAAGGATCACTAAATCTCAATCCAGTAGTAGTATTTTTTGCTTTATTAGTAGGTGCTAGAGTCGCAGGTTTATTG
GGTGTTTTTATCTCTATCCCAATCACGGGAGTAATTGTATCTTTATTTGAAATTGATGAGATGAAGTCTGAAGTTTAG

Upstream 100 bases:

>100_bases
CTGATTATCCAATTGGAGAAAATCTGCTGTAAGTAGGTAGCGATCGCTATTTGATTGTTGTATGTTGAAAATCAATTAAT
CAAATTTTTTGATACAGTAT

Downstream 100 bases:

>100_bases
CCAATAGTCAAGTCGCTTTGCTCCAATTAAAAATTCAAAAAAGGTCATTAGTTATTGATTTTTCCTTCTCCTACGCCATA
CCCTTTATTCTCATCTTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MSGIEAKNLWHRLNNLALVRFLLLVAAGWAIVQLLAYFETVIIIFTFAAILAFLLSYPVQWLRRFLPHSVAVVVVFLISI
VILGGLLITVGVALLSQGQQLIDSISAFLTSLLPFLERIERLLSNRNLQIDLSVIQEQLRTQAVSTLVTSLAIVQQFLTN
FVTFILIAVVAFFMLLDGEKLWNFILKIVPQKRRIRFTNIMRRSFLGFFRGQLLLCLFLTSSTFIIFLLLQVPFALILSV
IVGILDIIPGIGATLGVGTITLIVLSQDVWLALKVLAACVVLQQIQDNLISPRIMQGSLNLNPVVVFFALLVGARVAGLL
GVFISIPITGVIVSLFEIDEMKSEV

Sequences:

>Translated_345_residues
MSGIEAKNLWHRLNNLALVRFLLLVAAGWAIVQLLAYFETVIIIFTFAAILAFLLSYPVQWLRRFLPHSVAVVVVFLISI
VILGGLLITVGVALLSQGQQLIDSISAFLTSLLPFLERIERLLSNRNLQIDLSVIQEQLRTQAVSTLVTSLAIVQQFLTN
FVTFILIAVVAFFMLLDGEKLWNFILKIVPQKRRIRFTNIMRRSFLGFFRGQLLLCLFLTSSTFIIFLLLQVPFALILSV
IVGILDIIPGIGATLGVGTITLIVLSQDVWLALKVLAACVVLQQIQDNLISPRIMQGSLNLNPVVVFFALLVGARVAGLL
GVFISIPITGVIVSLFEIDEMKSEV
>Mature_344_residues
SGIEAKNLWHRLNNLALVRFLLLVAAGWAIVQLLAYFETVIIIFTFAAILAFLLSYPVQWLRRFLPHSVAVVVVFLISIV
ILGGLLITVGVALLSQGQQLIDSISAFLTSLLPFLERIERLLSNRNLQIDLSVIQEQLRTQAVSTLVTSLAIVQQFLTNF
VTFILIAVVAFFMLLDGEKLWNFILKIVPQKRRIRFTNIMRRSFLGFFRGQLLLCLFLTSSTFIIFLLLQVPFALILSVI
VGILDIIPGIGATLGVGTITLIVLSQDVWLALKVLAACVVLQQIQDNLISPRIMQGSLNLNPVVVFFALLVGARVAGLLG
VFISIPITGVIVSLFEIDEMKSEV

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=339, Percent_Identity=24.7787610619469, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI87082271, Length=315, Percent_Identity=24.7619047619048, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003544
- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 38257; Mature: 38126

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGIEAKNLWHRLNNLALVRFLLLVAAGWAIVQLLAYFETVIIIFTFAAILAFLLSYPVQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLRRFLPHSVAVVVVFLISIVILGGLLITVGVALLSQGQQLIDSISAFLTSLLPFLERIE
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
RLLSNRNLQIDLSVIQEQLRTQAVSTLVTSLAIVQQFLTNFVTFILIAVVAFFMLLDGEK
HHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
LWNFILKIVPQKRRIRFTNIMRRSFLGFFRGQLLLCLFLTSSTFIIFLLLQVPFALILSV
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVGILDIIPGIGATLGVGTITLIVLSQDVWLALKVLAACVVLQQIQDNLISPRIMQGSLN
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC
LNPVVVFFALLVGARVAGLLGVFISIPITGVIVSLFEIDEMKSEV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SGIEAKNLWHRLNNLALVRFLLLVAAGWAIVQLLAYFETVIIIFTFAAILAFLLSYPVQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLRRFLPHSVAVVVVFLISIVILGGLLITVGVALLSQGQQLIDSISAFLTSLLPFLERIE
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
RLLSNRNLQIDLSVIQEQLRTQAVSTLVTSLAIVQQFLTNFVTFILIAVVAFFMLLDGEK
HHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
LWNFILKIVPQKRRIRFTNIMRRSFLGFFRGQLLLCLFLTSSTFIIFLLLQVPFALILSV
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVGILDIIPGIGATLGVGTITLIVLSQDVWLALKVLAACVVLQQIQDNLISPRIMQGSLN
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC
LNPVVVFFALLVGARVAGLLGVFISIPITGVIVSLFEIDEMKSEV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]