Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17227698

Identifier: 17227698

GI number: 17227698

Start: 218697

End: 219911

Strand: Direct

Name: 17227698

Synonym: alr0202

Alternate gene names: NA

Gene position: 218697-219911 (Clockwise)

Preceding gene: 17227697

Following gene: 17227699

Centisome position: 3.41

GC content: 43.7

Gene sequence:

>1215_bases
ATGAAAGTAAACCTTGCAAATCTACCAATCTCTACATCTGCTTTTGTTGGCAACATCGTCACTGAGGAATTACCGGCTAC
AGATGCTTTGATGCAGTTTTTATCCCAAGAAATGCAGGCTCAAGTCAAAGCATCCTCAAAGTGTGTACAAGCCGTAGTTC
AACGTATGGCCAAGGAAGTAAACCGGATATGCGATAAAAGCTCTCGCATTCAAACATCTGGTGAAGTTCACTCTTGGCAA
TTAACTCTGGCTCGTCATCGTTTGCAAAAATGCCTACATTACTATCAATTAGGTTCTCAACGAGGACGGGTAGAATTACA
TAGTAGTCTAGGCGCTATGGTTTACCGTCATGTGACGATCGCCGGTTCAGATTTAGGGTTTGATGGACGTTACAGTTTAA
TTGAAGATTTTCTCCAAGCATTTTACATTGAAGCGATCAAAGCTTTTCGTCGGGAAAATGAACTGGCTGAAGATTACACG
CCACGCACTCAACTGCAACTAGCAGAATATATGGCGTTTACCGAACAGTATGCCAAGCGCCGAATTAATTTACCCGGTGG
CAATAATCAACAATTAGTTATTTTACGCGCCCAAGGTTTTGCTCGTCGTCAGCCCCAAGAGACAACAGTAGATATTGAAA
TGGCGGTGGAATCTGCTAGAAGTGAGGAAGCTGAATCTTACCAGCGTAACTCGGCGGTGCAACAAATCCGCTCCCAGATG
ATTGCCCAAACTAATTTTGACCCTTCAGAAGAATCAGAACGCGATCGCATCATTGCTGAATTAATTAAATACCTAGAATC
CCAAGGTCAATCCGACTGCATCGATTACCTCACACTCAAGCTGCAAGACCTCTCAGCACCAGAAATTGACCAAATTCTCG
GACTGACCAGCCGTCAACGCGATTATCTACAACAGCGTTTTAAATATCATGTGCAGAAGTTTGCTAAACAACACCAATGG
CAATTAGTCCACCAATGGTTAGGCGCAGGTTTAGAACAGAAATTGGGTTTATCTGCCCAGCAATGGAACACTTTAATGGG
TACACTCTCGTTACCACAACAACAACTTCTGCAATTAAAGTTGGCTAGACATAGTGATCAGGCGATCGCTAAAACCCTCA
AATGTACCCCCAAGCAATTACAAAAACGCTGGACTGAATTGCTAGATACCGCGTGGGCTATCCGCAACGGTAATACTGAA
GTCCAAGCAGGCTAA

Upstream 100 bases:

>100_bases
GTCTTGATGGATGAATGGTCAAAGATTCTCCAGTAAAGCCTGTTTTCAGGTACTGTTTGTGCATTCTACTTAAGGTGCAA
GACCAAACCCAGGAAAATAC

Downstream 100 bases:

>100_bases
ATCATTAGATTTTATCGGTTGGTTAGACAAGTTATTACCAAGATTTTCTGCAAATCCTACTGCATAACTAACATTACAAT
TCTTCTCTCTTTAGCTCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MKVNLANLPISTSAFVGNIVTEELPATDALMQFLSQEMQAQVKASSKCVQAVVQRMAKEVNRICDKSSRIQTSGEVHSWQ
LTLARHRLQKCLHYYQLGSQRGRVELHSSLGAMVYRHVTIAGSDLGFDGRYSLIEDFLQAFYIEAIKAFRRENELAEDYT
PRTQLQLAEYMAFTEQYAKRRINLPGGNNQQLVILRAQGFARRQPQETTVDIEMAVESARSEEAESYQRNSAVQQIRSQM
IAQTNFDPSEESERDRIIAELIKYLESQGQSDCIDYLTLKLQDLSAPEIDQILGLTSRQRDYLQQRFKYHVQKFAKQHQW
QLVHQWLGAGLEQKLGLSAQQWNTLMGTLSLPQQQLLQLKLARHSDQAIAKTLKCTPKQLQKRWTELLDTAWAIRNGNTE
VQAG

Sequences:

>Translated_404_residues
MKVNLANLPISTSAFVGNIVTEELPATDALMQFLSQEMQAQVKASSKCVQAVVQRMAKEVNRICDKSSRIQTSGEVHSWQ
LTLARHRLQKCLHYYQLGSQRGRVELHSSLGAMVYRHVTIAGSDLGFDGRYSLIEDFLQAFYIEAIKAFRRENELAEDYT
PRTQLQLAEYMAFTEQYAKRRINLPGGNNQQLVILRAQGFARRQPQETTVDIEMAVESARSEEAESYQRNSAVQQIRSQM
IAQTNFDPSEESERDRIIAELIKYLESQGQSDCIDYLTLKLQDLSAPEIDQILGLTSRQRDYLQQRFKYHVQKFAKQHQW
QLVHQWLGAGLEQKLGLSAQQWNTLMGTLSLPQQQLLQLKLARHSDQAIAKTLKCTPKQLQKRWTELLDTAWAIRNGNTE
VQAG
>Mature_404_residues
MKVNLANLPISTSAFVGNIVTEELPATDALMQFLSQEMQAQVKASSKCVQAVVQRMAKEVNRICDKSSRIQTSGEVHSWQ
LTLARHRLQKCLHYYQLGSQRGRVELHSSLGAMVYRHVTIAGSDLGFDGRYSLIEDFLQAFYIEAIKAFRRENELAEDYT
PRTQLQLAEYMAFTEQYAKRRINLPGGNNQQLVILRAQGFARRQPQETTVDIEMAVESARSEEAESYQRNSAVQQIRSQM
IAQTNFDPSEESERDRIIAELIKYLESQGQSDCIDYLTLKLQDLSAPEIDQILGLTSRQRDYLQQRFKYHVQKFAKQHQW
QLVHQWLGAGLEQKLGLSAQQWNTLMGTLSLPQQQLLQLKLARHSDQAIAKTLKCTPKQLQKRWTELLDTAWAIRNGNTE
VQAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46249; Mature: 46249

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVNLANLPISTSAFVGNIVTEELPATDALMQFLSQEMQAQVKASSKCVQAVVQRMAKEV
CCCEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRICDKSSRIQTSGEVHSWQLTLARHRLQKCLHYYQLGSQRGRVELHSSLGAMVYRHVTI
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEE
AGSDLGFDGRYSLIEDFLQAFYIEAIKAFRRENELAEDYTPRTQLQLAEYMAFTEQYAKR
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
RINLPGGNNQQLVILRAQGFARRQPQETTVDIEMAVESARSEEAESYQRNSAVQQIRSQM
CCCCCCCCCCEEEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAQTNFDPSEESERDRIIAELIKYLESQGQSDCIDYLTLKLQDLSAPEIDQILGLTSRQR
HHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCHHHH
DYLQQRFKYHVQKFAKQHQWQLVHQWLGAGLEQKLGLSAQQWNTLMGTLSLPQQQLLQLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHCCCHHHHHHHH
LARHSDQAIAKTLKCTPKQLQKRWTELLDTAWAIRNGNTEVQAG
HHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKVNLANLPISTSAFVGNIVTEELPATDALMQFLSQEMQAQVKASSKCVQAVVQRMAKEV
CCCEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRICDKSSRIQTSGEVHSWQLTLARHRLQKCLHYYQLGSQRGRVELHSSLGAMVYRHVTI
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEE
AGSDLGFDGRYSLIEDFLQAFYIEAIKAFRRENELAEDYTPRTQLQLAEYMAFTEQYAKR
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
RINLPGGNNQQLVILRAQGFARRQPQETTVDIEMAVESARSEEAESYQRNSAVQQIRSQM
CCCCCCCCCCEEEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAQTNFDPSEESERDRIIAELIKYLESQGQSDCIDYLTLKLQDLSAPEIDQILGLTSRQR
HHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCHHHH
DYLQQRFKYHVQKFAKQHQWQLVHQWLGAGLEQKLGLSAQQWNTLMGTLSLPQQQLLQLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHCCCHHHHHHHH
LARHSDQAIAKTLKCTPKQLQKRWTELLDTAWAIRNGNTEVQAG
HHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA