| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17227628
Identifier: 17227628
GI number: 17227628
Start: 136623
End: 137957
Strand: Direct
Name: 17227628
Synonym: alr0132
Alternate gene names: NA
Gene position: 136623-137957 (Clockwise)
Preceding gene: 17227626
Following gene: 17227636
Centisome position: 2.13
GC content: 45.69
Gene sequence:
>1335_bases ATGACATTATCTAGACGCAAGTTTTTTGCAATGGCTGGTGCGAGTGCAGCCGGAACTCTAGCTATATCTCCCTTGCAAGG TCTGCTTGCTAGAGCTGCTTTCGGTCAAGTGACACCTACCACTACAGGATATGGTCCACTTATTGACAGTCTTGATGGGA TTTTAGCAGTACCAGCTGGATTCCAGTATCGAGTTATATCTCGTGTTGGTAACATCATGGCTGATGGATCTCCAGTACCT GGTAGTCAAGACGGGATGGCAGCCTTCAAAGGTCCTAGAGGCACAACTATCTTGATTTGTAACCATGAACTGGGCAATAC TTCTGGTACACAAGTACAAGTACCAAATCGTTATGATCCTGTGAGTAGAGGCGGAACTACGACTATGGTTGTAGGGGCAA ATCGTCAGTTAATCAAACAGTTTGCCTCTCTCGGTGGAACCATTCGTAACTGTGCAGGTGGTCCAACTCCTTGGGGTTCA TGGATTACTTGTGAAGAAAATGTCAGCGTACCTGGTAGCTCTGATGGATCTACAAAGTTACACGGTTATAACTTTGAGGT TCCCGCTAGTGCTACGGCTCCTGTAGAACCAGTGCCTCTAGTGGCTATGGGACGATTTAACCATGAGGCTGTGGCTGTAG ACCCTGCAACTGGTATTGTTTACCAAACAGAAGATAGAGGAGATAGCCTTTTCTATCGTTTTCTCCCCAACCAACCTGGT AATTTAGCAGCAGGTGGTAGACTCCAAGCTCTCAGAATAGGTAATATTTCTAACATTGCTGGTAGTGTTAACACTGCTGG TGGTTTCAGCGTAGGACAAAAATGGGCTGTAAATTGGGTAGATATCCCTGAGCCTAACCCACAAACAGATAATGTCCGTG AACAGGGTCGTAACTTAGGTGCAGCTAGATTTGCTCGTGGGGAAGGTATTTGGTACGGTAACGGTGAAATTTATTTCTGT TGTACAAATGGCGGCTCTGTTAACCCTAGTGGTAATCCTAATGGGCTTGGTCAAGTCTTCCGTTACATTCCTGCTACTAA TACCCTTGAGTTGTTTGTCCAGTCTCCTGGAGCCAGTGATCTTCGTGCGCCTGATAACATTTGTGTAGCACCTTTTGGCG ATCTCATTCTTTGTGAAGACGGAGCTGCGCCCAATTTTATAAGAGGTGTGACTCCTGATGGAAAACTCTATAATATTGCA CGTAACATCTTAAATGGTGGTGGTAGTGAGTTTGCTGGAGCTTGTTTTTCTCCTGATGGTCGCACTCTGTTTGTTAACGT CCAAAGTGCTGGTCTGACTCTAGCTATCTGGGGTCCTTGGGAAAGACGGATTTAG
Upstream 100 bases:
>100_bases TAAATTCTATTAACAAGTTTTATTTTAAATGAATCATTACCAGAACTTAATCAAGCACAAGTAATTTTTACTAGGCATTT TGATTAACCAAAAATTTCTC
Downstream 100 bases:
>100_bases TGACGACCTACTAATCTCAAAAACCTAGTTGAGAAAAGCGATCGCCTCTGTGTTAACTTGAGTATCAGCGATCGCTTTCT ATTTATCCCCAATGACTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: WD40 Domain-Containing Protein Beta Propeller; Twin-Arginine Translocation Pathway Signal; Twin-Arginine Translocation Pathway Signal Protein; Phosphatase; Tat Pathway Signal Sequence Domain Protein; WD40 Domain-Containing Protein; LB Protein; WD40 Domain Protein Beta Propeller; DTDP-Glucose 4 6-Dehydratase; Signal Peptide
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MTLSRRKFFAMAGASAAGTLAISPLQGLLARAAFGQVTPTTTGYGPLIDSLDGILAVPAGFQYRVISRVGNIMADGSPVP GSQDGMAAFKGPRGTTILICNHELGNTSGTQVQVPNRYDPVSRGGTTTMVVGANRQLIKQFASLGGTIRNCAGGPTPWGS WITCEENVSVPGSSDGSTKLHGYNFEVPASATAPVEPVPLVAMGRFNHEAVAVDPATGIVYQTEDRGDSLFYRFLPNQPG NLAAGGRLQALRIGNISNIAGSVNTAGGFSVGQKWAVNWVDIPEPNPQTDNVREQGRNLGAARFARGEGIWYGNGEIYFC CTNGGSVNPSGNPNGLGQVFRYIPATNTLELFVQSPGASDLRAPDNICVAPFGDLILCEDGAAPNFIRGVTPDGKLYNIA RNILNGGGSEFAGACFSPDGRTLFVNVQSAGLTLAIWGPWERRI
Sequences:
>Translated_444_residues MTLSRRKFFAMAGASAAGTLAISPLQGLLARAAFGQVTPTTTGYGPLIDSLDGILAVPAGFQYRVISRVGNIMADGSPVP GSQDGMAAFKGPRGTTILICNHELGNTSGTQVQVPNRYDPVSRGGTTTMVVGANRQLIKQFASLGGTIRNCAGGPTPWGS WITCEENVSVPGSSDGSTKLHGYNFEVPASATAPVEPVPLVAMGRFNHEAVAVDPATGIVYQTEDRGDSLFYRFLPNQPG NLAAGGRLQALRIGNISNIAGSVNTAGGFSVGQKWAVNWVDIPEPNPQTDNVREQGRNLGAARFARGEGIWYGNGEIYFC CTNGGSVNPSGNPNGLGQVFRYIPATNTLELFVQSPGASDLRAPDNICVAPFGDLILCEDGAAPNFIRGVTPDGKLYNIA RNILNGGGSEFAGACFSPDGRTLFVNVQSAGLTLAIWGPWERRI >Mature_443_residues TLSRRKFFAMAGASAAGTLAISPLQGLLARAAFGQVTPTTTGYGPLIDSLDGILAVPAGFQYRVISRVGNIMADGSPVPG SQDGMAAFKGPRGTTILICNHELGNTSGTQVQVPNRYDPVSRGGTTTMVVGANRQLIKQFASLGGTIRNCAGGPTPWGSW ITCEENVSVPGSSDGSTKLHGYNFEVPASATAPVEPVPLVAMGRFNHEAVAVDPATGIVYQTEDRGDSLFYRFLPNQPGN LAAGGRLQALRIGNISNIAGSVNTAGGFSVGQKWAVNWVDIPEPNPQTDNVREQGRNLGAARFARGEGIWYGNGEIYFCC TNGGSVNPSGNPNGLGQVFRYIPATNTLELFVQSPGASDLRAPDNICVAPFGDLILCEDGAAPNFIRGVTPDGKLYNIAR NILNGGGSEFAGACFSPDGRTLFVNVQSAGLTLAIWGPWERRI
Specific function: Unknown
COG id: COG3211
COG function: function code R; Predicted phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46553; Mature: 46422
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSRRKFFAMAGASAAGTLAISPLQGLLARAAFGQVTPTTTGYGPLIDSLDGILAVPAG CCCCCCEEEEEECCCCCCEEEECHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEECCCC FQYRVISRVGNIMADGSPVPGSQDGMAAFKGPRGTTILICNHELGNTSGTQVQVPNRYDP CEEHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCEEECCCCCCC VSRGGTTTMVVGANRQLIKQFASLGGTIRNCAGGPTPWGSWITCEENVSVPGSSDGSTKL CCCCCCEEEEECCCHHHHHHHHHHCCHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCEE HGYNFEVPASATAPVEPVPLVAMGRFNHEAVAVDPATGIVYQTEDRGDSLFYRFLPNQPG EEEEEECCCCCCCCCCCCCEEEECCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCC NLAAGGRLQALRIGNISNIAGSVNTAGGFSVGQKWAVNWVDIPEPNPQTDNVREQGRNLG CCCCCCEEEEEEECCCHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHCCCC AARFARGEGIWYGNGEIYFCCTNGGSVNPSGNPNGLGQVFRYIPATNTLELFVQSPGASD HHHEECCCEEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCC LRAPDNICVAPFGDLILCEDGAAPNFIRGVTPDGKLYNIARNILNGGGSEFAGACFSPDG CCCCCCEEEECCCCEEEECCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCCCCEECCCC RTLFVNVQSAGLTLAIWGPWERRI CEEEEEEECCCEEEEEECCHHCCC >Mature Secondary Structure TLSRRKFFAMAGASAAGTLAISPLQGLLARAAFGQVTPTTTGYGPLIDSLDGILAVPAG CCCCCEEEEEECCCCCCEEEECHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEECCCC FQYRVISRVGNIMADGSPVPGSQDGMAAFKGPRGTTILICNHELGNTSGTQVQVPNRYDP CEEHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCEEECCCCCCC VSRGGTTTMVVGANRQLIKQFASLGGTIRNCAGGPTPWGSWITCEENVSVPGSSDGSTKL CCCCCCEEEEECCCHHHHHHHHHHCCHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCEE HGYNFEVPASATAPVEPVPLVAMGRFNHEAVAVDPATGIVYQTEDRGDSLFYRFLPNQPG EEEEEECCCCCCCCCCCCCEEEECCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCC NLAAGGRLQALRIGNISNIAGSVNTAGGFSVGQKWAVNWVDIPEPNPQTDNVREQGRNLG CCCCCCEEEEEEECCCHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHCCCC AARFARGEGIWYGNGEIYFCCTNGGSVNPSGNPNGLGQVFRYIPATNTLELFVQSPGASD HHHEECCCEEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCC LRAPDNICVAPFGDLILCEDGAAPNFIRGVTPDGKLYNIARNILNGGGSEFAGACFSPDG CCCCCCEEEECCCCEEEECCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCCCCEECCCC RTLFVNVQSAGLTLAIWGPWERRI CEEEEEEECCCEEEEEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA