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The map label for this gene is chlP [H]

Identifier: 17227624

GI number: 17227624

Start: 131490

End: 132710

Strand: Direct

Name: chlP [H]

Synonym: alr0128

Alternate gene names: 17227624

Gene position: 131490-132710 (Clockwise)

Preceding gene: 17227620

Following gene: 17227626

Centisome position: 2.05

GC content: 45.05

Gene sequence:

>1221_bases
TTGACACTACGGGTTGCTGTTGTTGGGTCAGGCCCAGCTGGTTCCTCTGCTGCTGAAACACTAGCCAAAGCTGGGATTGA
GACCTACCTGTTTGAGCGCAAATTGGATAACGCCAAACCCTGTGGGGGGGCGATTCCCTTATGTATGGTAAGCGAGTTTG
ACTTACCACCAGAAATTATTGATCGTCAAGTGCGGAAGATGAAAATGATTTCACCTTCCAATCGTGAAGTTGATATCAAT
CTGATAAAAGAAGACGAATATATAGGAATGTGCCGGCGTGAAGTCCTAGATGGCTTCTTACGCAATCGCGCGGCAAAATT
AGGGGCAAATTTAATTAATGCCACCGTTCATAAAGTTGATATACCTGGAAATAACAGCGACCCATACACCATTCATTATG
TTGACCATAATGAAGGCGGCGCACAAGGTGTCACAAAAACTTTAAAAGTAGATTTGATTATTGGTGCAGATGGGGCTAAT
TCCCGCATTGCCAAAGAAATGGATGCAGGGGATTATAATTATGCGATCGCTTTCCAAGAGCGTATCCGCTTACCCGAAGA
TAAAATGGCATATTACAACGACCTTGCCGAAATGTATGTAGGCAATGACGTTTCCACAGACTTTTATGCCTGGGTATTCC
CCAAATATGACCACGTAGCCGTCGGTACTGGCACAATGCAGGTACACAAAGCCAGCATCAAACAGTTACAGGCTGGTATC
CGCACCCGTGCTAGCGAAAAATTAGCAGGTGGTAAAATCATCAAAGTAGAAGCCCACCCAATCCCCGAACATCCACGTCC
TCGACGTGTTGTTGGTCGCATAGCCTTGGTTGGAGACGCTGCTGGCTACGTTACCAAGTCTTCTGGTGAAGGGATTTACT
TTGCTGCTAAATCTGGGCGGATGTGTGCAGAAACCATTGTAGAAGTTTCTCAAAATGGTAGTCGTATTCCCACAGAAAAC
GAACTCAAGATTTATCTCAAACGCTGGGATAAAAAATACGGACTCACTTACAAAGTGTTGGACATCTTACAAACAGTATT
TTACCGCTCCGATGCCACCCGTGAGGCATTTGTAGAGATGTGTGGAGACTTGGATGTACAAAAACTGACTTTCGACAGCT
ATCTGTATAAGACAGTCGTCCCTGCTAACCCCATCACCCAGTTAAAAATTACTGCCAAGACAATTGGTAGTCTCATCCGT
GGTAACGCTTTAGCACCCTAA

Upstream 100 bases:

>100_bases
GAATATTGCATTTCTGTCAAAACCTGGAGGCAGAGCGAGAAATCACCCAAAAGACCGTGGTAGGATGCTCTCGGTAAATG
TGAAGATTGGGAGAAGACCT

Downstream 100 bases:

>100_bases
ATTTGAGATGACCATCAAGTAATTTGTAATTAAGACTTAATTACAAATTCAAAATTCCGAATTAATTGTCAAATGGCACT
CCCTGAATACCAATGGGGAG

Product: geranylgeranyl hydrogenase

Products: NA

Alternate protein names: Geranylgeranyl reductase [H]

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MTLRVAVVGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIIDRQVRKMKMISPSNREVDIN
LIKEDEYIGMCRREVLDGFLRNRAAKLGANLINATVHKVDIPGNNSDPYTIHYVDHNEGGAQGVTKTLKVDLIIGADGAN
SRIAKEMDAGDYNYAIAFQERIRLPEDKMAYYNDLAEMYVGNDVSTDFYAWVFPKYDHVAVGTGTMQVHKASIKQLQAGI
RTRASEKLAGGKIIKVEAHPIPEHPRPRRVVGRIALVGDAAGYVTKSSGEGIYFAAKSGRMCAETIVEVSQNGSRIPTEN
ELKIYLKRWDKKYGLTYKVLDILQTVFYRSDATREAFVEMCGDLDVQKLTFDSYLYKTVVPANPITQLKITAKTIGSLIR
GNALAP

Sequences:

>Translated_406_residues
MTLRVAVVGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIIDRQVRKMKMISPSNREVDIN
LIKEDEYIGMCRREVLDGFLRNRAAKLGANLINATVHKVDIPGNNSDPYTIHYVDHNEGGAQGVTKTLKVDLIIGADGAN
SRIAKEMDAGDYNYAIAFQERIRLPEDKMAYYNDLAEMYVGNDVSTDFYAWVFPKYDHVAVGTGTMQVHKASIKQLQAGI
RTRASEKLAGGKIIKVEAHPIPEHPRPRRVVGRIALVGDAAGYVTKSSGEGIYFAAKSGRMCAETIVEVSQNGSRIPTEN
ELKIYLKRWDKKYGLTYKVLDILQTVFYRSDATREAFVEMCGDLDVQKLTFDSYLYKTVVPANPITQLKITAKTIGSLIR
GNALAP
>Mature_405_residues
TLRVAVVGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEIIDRQVRKMKMISPSNREVDINL
IKEDEYIGMCRREVLDGFLRNRAAKLGANLINATVHKVDIPGNNSDPYTIHYVDHNEGGAQGVTKTLKVDLIIGADGANS
RIAKEMDAGDYNYAIAFQERIRLPEDKMAYYNDLAEMYVGNDVSTDFYAWVFPKYDHVAVGTGTMQVHKASIKQLQAGIR
TRASEKLAGGKIIKVEAHPIPEHPRPRRVVGRIALVGDAAGYVTKSSGEGIYFAAKSGRMCAETIVEVSQNGSRIPTENE
LKIYLKRWDKKYGLTYKVLDILQTVFYRSDATREAFVEMCGDLDVQKLTFDSYLYKTVVPANPITQLKITAKTIGSLIRG
NALAP

Specific function: Catalyzes the stepwise hydrogenation of geranylgeraniol to phytol during chlorophyll A (ChlA) biosynthesis [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the geranylgeranyl reductase family. ChlP subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010253
- InterPro:   IPR011774
- InterPro:   IPR011777
- InterPro:   IPR002938
- InterPro:   IPR016040
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: =1.3.1.83 [H]

Molecular weight: Translated: 44760; Mature: 44629

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRVAVVGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEII
CEEEEEEEECCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHH
DRQVRKMKMISPSNREVDINLIKEDEYIGMCRREVLDGFLRNRAAKLGANLINATVHKVD
HHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
IPGNNSDPYTIHYVDHNEGGAQGVTKTLKVDLIIGADGANSRIAKEMDAGDYNYAIAFQE
CCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCHHHHHCCCCCCEEEEEEHH
RIRLPEDKMAYYNDLAEMYVGNDVSTDFYAWVFPKYDHVAVGTGTMQVHKASIKQLQAGI
HCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHH
RTRASEKLAGGKIIKVEAHPIPEHPRPRRVVGRIALVGDAAGYVTKSSGEGIYFAAKSGR
HHHHHHHCCCCEEEEEECCCCCCCCCCHHHHEEEEEEECCCCEEECCCCCEEEEEECCCC
MCAETIVEVSQNGSRIPTENELKIYLKRWDKKYGLTYKVLDILQTVFYRSDATREAFVEM
HHHHHHHHHHCCCCCCCCCCCCEEEEEHHCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHH
CGDLDVQKLTFDSYLYKTVVPANPITQLKITAKTIGSLIRGNALAP
HCCCCCEEEEHHHHHHHHCCCCCCCEEEEEEHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TLRVAVVGSGPAGSSAAETLAKAGIETYLFERKLDNAKPCGGAIPLCMVSEFDLPPEII
EEEEEEEECCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHH
DRQVRKMKMISPSNREVDINLIKEDEYIGMCRREVLDGFLRNRAAKLGANLINATVHKVD
HHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
IPGNNSDPYTIHYVDHNEGGAQGVTKTLKVDLIIGADGANSRIAKEMDAGDYNYAIAFQE
CCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCHHHHHCCCCCCEEEEEEHH
RIRLPEDKMAYYNDLAEMYVGNDVSTDFYAWVFPKYDHVAVGTGTMQVHKASIKQLQAGI
HCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHH
RTRASEKLAGGKIIKVEAHPIPEHPRPRRVVGRIALVGDAAGYVTKSSGEGIYFAAKSGR
HHHHHHHCCCCEEEEEECCCCCCCCCCHHHHEEEEEEECCCCEEECCCCCEEEEEECCCC
MCAETIVEVSQNGSRIPTENELKIYLKRWDKKYGLTYKVLDILQTVFYRSDATREAFVEM
HHHHHHHHHHCCCCCCCCCCCCEEEEEHHCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHH
CGDLDVQKLTFDSYLYKTVVPANPITQLKITAKTIGSLIRGNALAP
HCCCCCEEEEHHHHHHHHCCCCCCCEEEEEEHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8766814; 8905231 [H]