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The map label for this gene is 17227514

Identifier: 17227514

GI number: 17227514

Start: 14319

End: 14714

Strand: Direct

Name: 17227514

Synonym: alr0018

Alternate gene names: NA

Gene position: 14319-14714 (Clockwise)

Preceding gene: 17227510

Following gene: 17227515

Centisome position: 0.22

GC content: 32.32

Gene sequence:

>396_bases
ATGAAAGCATATTCCCTCGACTTTCGCCAAAAAATATTTGATACATATAAGACAGGTGGAATATCACAACGTCAATTAGC
AAACAAATTTTGTGTCAGTTTAGGTTTTATTGAGAAATTACTAAAGCAATATAGAGAAACAGCAAGTATCGCTCCTAAAG
TTAGGACAAAACAAACTCCTCCAAAGCTCAACGAAGAACAAATGAAGATTCTTGAAGAAATAGTTGAAGCTAAGAATGAT
TTGACTTTATCAGAAATTCGCTTCATTCTCAAAGAAAAAACAGGAATAACAATTGGTATATCTACGGTAGATAGGATGTT
ACAGAGGATAGAAATAAGCCTTAAAAAAAAACATTGCACGCCTCAGAAAAAGAGACTGAAAGAGTTCAATTATTAA

Upstream 100 bases:

>100_bases
AAATTAGTGCGAAAGAGTTTAGTACAAAGTTTTATAGCGTTTACCAGTATAATGAAGTACACTAATTAAAATAAATCAGT
GTATCTATTCAAGGGTAAAA

Downstream 100 bases:

>100_bases
GAGTACAATTCTGGCTACAACTTCAGGGGATACTAGCTGAAAACCTTGTCTTTCTTGACGAAGCAGGAGCTAATCTATCT
TTAATAAGGCACTCCGCTCG

Product: transposase

Products: NA

Alternate protein names: Transposase And Inactivated Derivatives-Like Protein; ISSoc4 Transposase OrfA

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MKAYSLDFRQKIFDTYKTGGISQRQLANKFCVSLGFIEKLLKQYRETASIAPKVRTKQTPPKLNEEQMKILEEIVEAKND
LTLSEIRFILKEKTGITIGISTVDRMLQRIEISLKKKHCTPQKKRLKEFNY

Sequences:

>Translated_131_residues
MKAYSLDFRQKIFDTYKTGGISQRQLANKFCVSLGFIEKLLKQYRETASIAPKVRTKQTPPKLNEEQMKILEEIVEAKND
LTLSEIRFILKEKTGITIGISTVDRMLQRIEISLKKKHCTPQKKRLKEFNY
>Mature_131_residues
MKAYSLDFRQKIFDTYKTGGISQRQLANKFCVSLGFIEKLLKQYRETASIAPKVRTKQTPPKLNEEQMKILEEIVEAKND
LTLSEIRFILKEKTGITIGISTVDRMLQRIEISLKKKHCTPQKKRLKEFNY

Specific function: Unknown

COG id: COG3415

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15326; Mature: 15326

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAYSLDFRQKIFDTYKTGGISQRQLANKFCVSLGFIEKLLKQYRETASIAPKVRTKQTP
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PKLNEEQMKILEEIVEAKNDLTLSEIRFILKEKTGITIGISTVDRMLQRIEISLKKKHCT
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCC
PQKKRLKEFNY
CHHHHHHHCCC
>Mature Secondary Structure
MKAYSLDFRQKIFDTYKTGGISQRQLANKFCVSLGFIEKLLKQYRETASIAPKVRTKQTP
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PKLNEEQMKILEEIVEAKNDLTLSEIRFILKEKTGITIGISTVDRMLQRIEISLKKKHCT
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCC
PQKKRLKEFNY
CHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA