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The map label for this gene is yfiP [H]

Identifier: 172087706

GI number: 172087706

Start: 1558481

End: 1559224

Strand: Reverse

Name: yfiP [H]

Synonym: VF_1409

Alternate gene names: 172087706

Gene position: 1559224-1558481 (Counterclockwise)

Preceding gene: 59712017

Following gene: 59712015

Centisome position: 53.81

GC content: 37.9

Gene sequence:

>744_bases
ATGCGCATTCATAAAGTTCACCAGTTACATAAAGAAAGATTAGCTCGTTCTTCTAAACCTTTTAATGCAAGAGGGGCGAA
TGTGAATCGCTGTGAATTTTGCCAAGTTCATAAAGACCACTGTATCTGTGAATATCAACCAGAAACCACATCAGATGCTG
CTTTCTTACTTATTATGTTTGATACAGAGGTATTAAAACCAAGTAATACAGGCAAATTGATTGCTGATGTGATCCCAGAA
ACGCACGCCTATCTTTGGTCGCGTACTGAGCCAAGTGAAGAAATGTTAGCATTGCTAAATAATGAAGCTTATCAGCCTTT
TGTGGTTTTCCCAGAAGAGCAAATTGAAGATAAGTCATTAGTGCGTAACGAAGTGATTATGGAAGAAGGGAAAACACCAC
TATTTATCTTATTAGACGGTAGTTGGCGTGAAGCAGGAAGAATGTATCGTAAAAGCCCATATTTACATCAGTTACCCGTT
CTTTCTTTTAAGAGTGAGCAGCTTTCTAATTACATTATGCGTAAAGCTTCAAAAGATCATCAACTTGCTACTGCAGAAGT
TGCTAGCTTGGTACTTGATCTGTTTGGTGAACAACAGAACGCAAGACATTTAGAGCACTGGTTTGAATTGTTCCGAGAGC
ATTACCTTTATAGTAAGCGACCAGTAAAAGGTGCAGAACGAGGTATGGGGTTAAAACGTTTGATTGAATTTCGTACAAAT
CTGAAAGTAAATAACGAAATCTAA

Upstream 100 bases:

>100_bases
ATTTTCCATTAGGAATTTCTCTTTAGAACTTGTTATTACTCATACTGTAAGTAAAATGCGCTTTTTTTTCCATATAAATA
AAATTGCTTGGTTGTTGTTC

Downstream 100 bases:

>100_bases
TACCAGTTTGAGGTTCAATTCACACTAAAAACCGATGAATATCGGATAGGTCACAGTCTGTATAGCTAAAAATTAGGTAA
GATAACACCATAAAAATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MRIHKVHQLHKERLARSSKPFNARGANVNRCEFCQVHKDHCICEYQPETTSDAAFLLIMFDTEVLKPSNTGKLIADVIPE
THAYLWSRTEPSEEMLALLNNEAYQPFVVFPEEQIEDKSLVRNEVIMEEGKTPLFILLDGSWREAGRMYRKSPYLHQLPV
LSFKSEQLSNYIMRKASKDHQLATAEVASLVLDLFGEQQNARHLEHWFELFREHYLYSKRPVKGAERGMGLKRLIEFRTN
LKVNNEI

Sequences:

>Translated_247_residues
MRIHKVHQLHKERLARSSKPFNARGANVNRCEFCQVHKDHCICEYQPETTSDAAFLLIMFDTEVLKPSNTGKLIADVIPE
THAYLWSRTEPSEEMLALLNNEAYQPFVVFPEEQIEDKSLVRNEVIMEEGKTPLFILLDGSWREAGRMYRKSPYLHQLPV
LSFKSEQLSNYIMRKASKDHQLATAEVASLVLDLFGEQQNARHLEHWFELFREHYLYSKRPVKGAERGMGLKRLIEFRTN
LKVNNEI
>Mature_247_residues
MRIHKVHQLHKERLARSSKPFNARGANVNRCEFCQVHKDHCICEYQPETTSDAAFLLIMFDTEVLKPSNTGKLIADVIPE
THAYLWSRTEPSEEMLALLNNEAYQPFVVFPEEQIEDKSLVRNEVIMEEGKTPLFILLDGSWREAGRMYRKSPYLHQLPV
LSFKSEQLSNYIMRKASKDHQLATAEVASLVLDLFGEQQNARHLEHWFELFREHYLYSKRPVKGAERGMGLKRLIEFRTN
LKVNNEI

Specific function: Unknown

COG id: COG3148

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DTW family [H]

Homologues:

Organism=Escherichia coli, GI87082133, Length=221, Percent_Identity=46.606334841629, Blast_Score=205, Evalue=3e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005636 [H]

Pfam domain/function: PF03942 DTW [H]

EC number: NA

Molecular weight: Translated: 28858; Mature: 28858

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIHKVHQLHKERLARSSKPFNARGANVNRCEFCQVHKDHCICEYQPETTSDAAFLLIMF
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCEEEEEEE
DTEVLKPSNTGKLIADVIPETHAYLWSRTEPSEEMLALLNNEAYQPFVVFPEEQIEDKSL
CCHHCCCCCCCCHHHHHCCHHHHHHCCCCCCHHHHHHHHCCCCCCCEEECCHHHCCHHHH
VRNEVIMEEGKTPLFILLDGSWREAGRMYRKSPYLHQLPVLSFKSEQLSNYIMRKASKDH
HHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHCCCCC
QLATAEVASLVLDLFGEQQNARHLEHWFELFREHYLYSKRPVKGAERGMGLKRLIEFRTN
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHC
LKVNNEI
CEECCCC
>Mature Secondary Structure
MRIHKVHQLHKERLARSSKPFNARGANVNRCEFCQVHKDHCICEYQPETTSDAAFLLIMF
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCEEEEEEE
DTEVLKPSNTGKLIADVIPETHAYLWSRTEPSEEMLALLNNEAYQPFVVFPEEQIEDKSL
CCHHCCCCCCCCHHHHHCCHHHHHHCCCCCCHHHHHHHHCCCCCCCEEECCHHHCCHHHH
VRNEVIMEEGKTPLFILLDGSWREAGRMYRKSPYLHQLPVLSFKSEQLSNYIMRKASKDH
HHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHCCCCC
QLATAEVASLVLDLFGEQQNARHLEHWFELFREHYLYSKRPVKGAERGMGLKRLIEFRTN
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHC
LKVNNEI
CEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]