| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 172087690
Identifier: 172087690
GI number: 172087690
Start: 1196733
End: 1196885
Strand: Direct
Name: 172087690
Synonym: VF_2605
Alternate gene names: NA
Gene position: 1196733-1196885 (Clockwise)
Preceding gene: 59711691
Following gene: 59711693
Centisome position: 41.3
GC content: 30.07
Gene sequence:
>153_bases ATGGGATTCTCATTTATAAATTGGGAAGGAAAAGTAGGGGGCATTATAAGAAAGCTGCTTATAGAGTCTAAATGGAAAAC TCACATTTGTTTTTTGTTTGTTTTTTTATTTGCTTTAACTAAAGTTGTTGAAGGTTTTTTTGTCTCAACTTGA
Upstream 100 bases:
>100_bases AGTGGTTGCACCCAAGCCAGCACCTAAGTAAAAGCCGGAAATGTTATCGTTAGCATTAGAAAATGCTGAAAATAATACCA ATAAAAGTGCAATTTTTTTC
Downstream 100 bases:
>100_bases TGTTTAATAAGCATTTATTTTACTAAATAGTGATATGGCTCTAAGAATTATTGATTTGTCAGTTTTTTTAGGTAGACTCC AGAGTTTTATAAATGAAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 50; Mature: 49
Protein sequence:
>50_residues MGFSFINWEGKVGGIIRKLLIESKWKTHICFLFVFLFALTKVVEGFFVST
Sequences:
>Translated_50_residues MGFSFINWEGKVGGIIRKLLIESKWKTHICFLFVFLFALTKVVEGFFVST >Mature_49_residues GFSFINWEGKVGGIIRKLLIESKWKTHICFLFVFLFALTKVVEGFFVST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5786; Mature: 5655
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFSFINWEGKVGGIIRKLLIESKWKTHICFLFVFLFALTKVVEGFFVST CCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GFSFINWEGKVGGIIRKLLIESKWKTHICFLFVFLFALTKVVEGFFVST CCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA