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The map label for this gene is ydiY [C]

Identifier: 172087654

GI number: 172087654

Start: 308282

End: 309283

Strand: Reverse

Name: ydiY [C]

Synonym: VF_0300

Alternate gene names: 172087654

Gene position: 309283-308282 (Counterclockwise)

Preceding gene: 59710912

Following gene: 172087653

Centisome position: 10.67

GC content: 38.52

Gene sequence:

>1002_bases
GTGTTAAAAAAAGGTTTACTTACAGGGCTTATCGCAATCAGTGCATCTGTTCATGCAAGTGAGATCGATATTGAAGACGC
AGATACATCATCTTCCTCTCCTAACTCAATCGAAATAGATTATGGAAACGATCGCTCATTATCTCAAAATTGTAGTCTAG
AATCGGTTTATACCTCTGGGACGAACTCCCATGTGGATGAAGAAAAATATTATTTATCCAAAGATGACTGTGAAGCAGGG
ACAAAAGAGTTAACACTTGAGAAAAAACCAAGTATTAACCCTGTCATTAGTCAACTAGAAGCGGAAATGGAAGAACCTGA
TACAACACCACCTTCACCATGGAAAAGCCAAATTGAATTCGGTTACCAATCAAGTAAAGGTAATGATGATTCTCAATCTC
TTAATGGTCGTTTAGAAGCCAGCTACACTGCTGGACAGCATCGTCATACTGGTGAGGTTAAATACTACCTAGCAAAAGAT
GATGGTGAAACAGATAAAGACCAATTAAGCCTTAATTTACAGAGTGACTATAAAATCAGTCCTGATTACTATCTCTATGC
CAACTTTAAAGGGTTAAATACCAAATATAGCGCATACTTCAATGACTATACCTTTTCGGGTGGTTTGGGTTACCAAGTCA
GTAATACAGAAAAATTACTATTGGAAGTGGAATTTGGTCCAGGTTTTCGTTACCAAAATCCGAACCTTGATGAAATTGAT
GATGATGACTTAATCCTGCCAGAGACGGTACAAGAGCCAATTATCCGAACTAATGTGCGTACATCTTGGAAGGCTCTTAG
TAACCTAACATTAGCTGGAGAAGTTACCGTCACAGCTGGTCACAGTAACACTCGTGTGGATTCAGAAGTCAGTGTGACAA
ACAACATCACAGAAGAAATTGCCCTAAAGATTGCGCAATCACAACAGTATTTAGATCGCGTTCCTCCAGGGCTAAGTAAT
ACCGATTCTGTATTTTCGATTAACTTACTGTTTTCATTCTAA

Upstream 100 bases:

>100_bases
ATCACTCCTTTCGCAAAATAAAGATTTTGACTCAAATTTAACTCACGAATGTAATAATATACTTATACTCGTCTACGATT
TTATCTCTCAGGATTCATGT

Downstream 100 bases:

>100_bases
GCTCTATCCGTTTAATGAAGTTCTTCATGTTTCTTCACTAAACCAAAGTCAGCTAAAATCGCATAAGCCGCAGGTATCAT
AAACAACACCAACAAAGTTG

Product: putative salt-induced outer membrane protein

Products: NA

Alternate protein names: Outer Membrane Protein

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MLKKGLLTGLIAISASVHASEIDIEDADTSSSSPNSIEIDYGNDRSLSQNCSLESVYTSGTNSHVDEEKYYLSKDDCEAG
TKELTLEKKPSINPVISQLEAEMEEPDTTPPSPWKSQIEFGYQSSKGNDDSQSLNGRLEASYTAGQHRHTGEVKYYLAKD
DGETDKDQLSLNLQSDYKISPDYYLYANFKGLNTKYSAYFNDYTFSGGLGYQVSNTEKLLLEVEFGPGFRYQNPNLDEID
DDDLILPETVQEPIIRTNVRTSWKALSNLTLAGEVTVTAGHSNTRVDSEVSVTNNITEEIALKIAQSQQYLDRVPPGLSN
TDSVFSINLLFSF

Sequences:

>Translated_333_residues
MLKKGLLTGLIAISASVHASEIDIEDADTSSSSPNSIEIDYGNDRSLSQNCSLESVYTSGTNSHVDEEKYYLSKDDCEAG
TKELTLEKKPSINPVISQLEAEMEEPDTTPPSPWKSQIEFGYQSSKGNDDSQSLNGRLEASYTAGQHRHTGEVKYYLAKD
DGETDKDQLSLNLQSDYKISPDYYLYANFKGLNTKYSAYFNDYTFSGGLGYQVSNTEKLLLEVEFGPGFRYQNPNLDEID
DDDLILPETVQEPIIRTNVRTSWKALSNLTLAGEVTVTAGHSNTRVDSEVSVTNNITEEIALKIAQSQQYLDRVPPGLSN
TDSVFSINLLFSF
>Mature_333_residues
MLKKGLLTGLIAISASVHASEIDIEDADTSSSSPNSIEIDYGNDRSLSQNCSLESVYTSGTNSHVDEEKYYLSKDDCEAG
TKELTLEKKPSINPVISQLEAEMEEPDTTPPSPWKSQIEFGYQSSKGNDDSQSLNGRLEASYTAGQHRHTGEVKYYLAKD
DGETDKDQLSLNLQSDYKISPDYYLYANFKGLNTKYSAYFNDYTFSGGLGYQVSNTEKLLLEVEFGPGFRYQNPNLDEID
DDDLILPETVQEPIIRTNVRTSWKALSNLTLAGEVTVTAGHSNTRVDSEVSVTNNITEEIALKIAQSQQYLDRVPPGLSN
TDSVFSINLLFSF

Specific function: Unknown

COG id: COG3137

COG function: function code M; Putative salt-induced outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36937; Mature: 36937

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKGLLTGLIAISASVHASEIDIEDADTSSSSPNSIEIDYGNDRSLSQNCSLESVYTSG
CCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECC
TNSHVDEEKYYLSKDDCEAGTKELTLEKKPSINPVISQLEAEMEEPDTTPPSPWKSQIEF
CCCCCCCHHEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHEEE
GYQSSKGNDDSQSLNGRLEASYTAGQHRHTGEVKYYLAKDDGETDKDQLSLNLQSDYKIS
CCCCCCCCCCHHHCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCHHHEEEEECCCEEEC
PDYYLYANFKGLNTKYSAYFNDYTFSGGLGYQVSNTEKLLLEVEFGPGFRYQNPNLDEID
CCEEEEEEECCCCCEEEEEECCEEECCCCCEEECCCEEEEEEEECCCCCCCCCCCCCCCC
DDDLILPETVQEPIIRTNVRTSWKALSNLTLAGEVTVTAGHSNTRVDSEVSVTNNITEEI
CCCEECCHHHHCCHHHCCCCHHHHHHHCEEEEEEEEEEECCCCCCCCCEEEHHHHHHHHH
ALKIAQSQQYLDRVPPGLSNTDSVFSINLLFSF
HHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEC
>Mature Secondary Structure
MLKKGLLTGLIAISASVHASEIDIEDADTSSSSPNSIEIDYGNDRSLSQNCSLESVYTSG
CCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECC
TNSHVDEEKYYLSKDDCEAGTKELTLEKKPSINPVISQLEAEMEEPDTTPPSPWKSQIEF
CCCCCCCHHEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHEEE
GYQSSKGNDDSQSLNGRLEASYTAGQHRHTGEVKYYLAKDDGETDKDQLSLNLQSDYKIS
CCCCCCCCCCHHHCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCHHHEEEEECCCEEEC
PDYYLYANFKGLNTKYSAYFNDYTFSGGLGYQVSNTEKLLLEVEFGPGFRYQNPNLDEID
CCEEEEEEECCCCCEEEEEECCEEECCCCCEEECCCEEEEEEEECCCCCCCCCCCCCCCC
DDDLILPETVQEPIIRTNVRTSWKALSNLTLAGEVTVTAGHSNTRVDSEVSVTNNITEEI
CCCEECCHHHHCCHHHCCCCHHHHHHHCEEEEEEEEEEECCCCCCCCCEEEHHHHHHHHH
ALKIAQSQQYLDRVPPGLSNTDSVFSINLLFSF
HHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA