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The map label for this gene is prkB [H]

Identifier: 172087645

GI number: 172087645

Start: 235728

End: 236597

Strand: Reverse

Name: prkB [H]

Synonym: VF_0214

Alternate gene names: 172087645

Gene position: 236597-235728 (Counterclockwise)

Preceding gene: 59710822

Following gene: 59710819

Centisome position: 8.17

GC content: 41.03

Gene sequence:

>870_bases
ATGTCAGCAAAACATCCAATTATTGCCGTAACGGGATCATCCGGAGCAGGCACTACCACCACATCTGAAGCATTTCGTAA
AATGTTCAATATGATGGACATAAAGGCATCTTGGCTTGAAGGGGACAGTTTCCATCGTTTCACTCGTCCTGAAATGGATG
TGGAGATCCGTAAAGCAAAAGAACAAGGTAAGCACATCAGTTACTTTGGTCCTCAAGCAAATGACTTTCCGGCACTAGAA
CAGTTTTTCCGTCAATACGGAGAGGATGGAACGGGTCAATATCGTCGCTATTTACATACTTTCGATGAAGCGGTTCCATT
CAATCAAATGCCTGGCACATTCACTCCATGGCAAGACCTACCAGATGATACCGATGTCCTTTTTTATGAAGGTCTACACG
GTGGTGTTGTTGATGGTGATATTAACGTATCTCAACATGTGGATTTACTTATCGGCATGGTGCCAATTGTAAACTTAGAA
TGGATACAGAAATTTGTTCGTGATACCCGTGATCGTGGGCATTCTCGTGAAGCCGTAATGGACTCAATTGTTCGTTCAAT
GGACGACTATTTAAATTACATTACTCCACAATTTTCTCGAACTCATATTAACTTCCAACGAGTGCCAACCGTAGATACCT
CTAACCCACTCAACGCAAAAGGCATTCCGAGTTTAGATGAAAGCTTTGTTGTCATCCGTTTTAGGGGGTTGAGTAAAGTC
GACTTTCCTTACTTATTAGCAATGATTGATGGTTCATTTATGTCTCGTCATAACACGCTAGTTGTTCCCGGAGGAAAAAT
GAGCTTTGCTATGGAGTTAATTATTAGACCACTACTTCAACAGTTAATTGATACTGGGAAAATAAATTAA

Upstream 100 bases:

>100_bases
GACTCACCAAGATACTCACAATTTTCAAACCGAACAGTATCATTTTTACCAACCCTGTTATAACATCCGACGAGAATAAG
GAAATTAGACAGGGTTTGTC

Downstream 100 bases:

>100_bases
TTTCGCTATCTTCTGCGCCAAATTTGGGGTTCTTCCAAAAATAGTGAATAATAGAGACTCTATTCACTATTTTTGCGATG
CTATGAAAACTTCTCCTTTT

Product: phosphoribulokinase

Products: NA

Alternate protein names: PRK; PRKase; Phosphopentokinase [H]

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MSAKHPIIAVTGSSGAGTTTTSEAFRKMFNMMDIKASWLEGDSFHRFTRPEMDVEIRKAKEQGKHISYFGPQANDFPALE
QFFRQYGEDGTGQYRRYLHTFDEAVPFNQMPGTFTPWQDLPDDTDVLFYEGLHGGVVDGDINVSQHVDLLIGMVPIVNLE
WIQKFVRDTRDRGHSREAVMDSIVRSMDDYLNYITPQFSRTHINFQRVPTVDTSNPLNAKGIPSLDESFVVIRFRGLSKV
DFPYLLAMIDGSFMSRHNTLVVPGGKMSFAMELIIRPLLQQLIDTGKIN

Sequences:

>Translated_289_residues
MSAKHPIIAVTGSSGAGTTTTSEAFRKMFNMMDIKASWLEGDSFHRFTRPEMDVEIRKAKEQGKHISYFGPQANDFPALE
QFFRQYGEDGTGQYRRYLHTFDEAVPFNQMPGTFTPWQDLPDDTDVLFYEGLHGGVVDGDINVSQHVDLLIGMVPIVNLE
WIQKFVRDTRDRGHSREAVMDSIVRSMDDYLNYITPQFSRTHINFQRVPTVDTSNPLNAKGIPSLDESFVVIRFRGLSKV
DFPYLLAMIDGSFMSRHNTLVVPGGKMSFAMELIIRPLLQQLIDTGKIN
>Mature_288_residues
SAKHPIIAVTGSSGAGTTTTSEAFRKMFNMMDIKASWLEGDSFHRFTRPEMDVEIRKAKEQGKHISYFGPQANDFPALEQ
FFRQYGEDGTGQYRRYLHTFDEAVPFNQMPGTFTPWQDLPDDTDVLFYEGLHGGVVDGDINVSQHVDLLIGMVPIVNLEW
IQKFVRDTRDRGHSREAVMDSIVRSMDDYLNYITPQFSRTHINFQRVPTVDTSNPLNAKGIPSLDESFVVIRFRGLSKVD
FPYLLAMIDGSFMSRHNTLVVPGGKMSFAMELIIRPLLQQLIDTGKIN

Specific function: Unknown

COG id: COG3954

COG function: function code C; Phosphoribulokinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphoribulokinase family [H]

Homologues:

Organism=Escherichia coli, GI2367214, Length=288, Percent_Identity=73.9583333333333, Blast_Score=457, Evalue=1e-130,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006082
- InterPro:   IPR006083 [H]

Pfam domain/function: PF00485 PRK [H]

EC number: =2.7.1.19 [H]

Molecular weight: Translated: 32837; Mature: 32706

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAKHPIIAVTGSSGAGTTTTSEAFRKMFNMMDIKASWLEGDSFHRFTRPEMDVEIRKAK
CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
EQGKHISYFGPQANDFPALEQFFRQYGEDGTGQYRRYLHTFDEAVPFNQMPGTFTPWQDL
HCCCEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDDTDVLFYEGLHGGVVDGDINVSQHVDLLIGMVPIVNLEWIQKFVRDTRDRGHSREAVM
CCCCCEEEEECCCCCEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHH
DSIVRSMDDYLNYITPQFSRTHINFQRVPTVDTSNPLNAKGIPSLDESFVVIRFRGLSKV
HHHHHHHHHHHHHHCCCCCCEEECEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
DFPYLLAMIDGSFMSRHNTLVVPGGKMSFAMELIIRPLLQQLIDTGKIN
CHHHHHHHHCCHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SAKHPIIAVTGSSGAGTTTTSEAFRKMFNMMDIKASWLEGDSFHRFTRPEMDVEIRKAK
CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
EQGKHISYFGPQANDFPALEQFFRQYGEDGTGQYRRYLHTFDEAVPFNQMPGTFTPWQDL
HCCCEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDDTDVLFYEGLHGGVVDGDINVSQHVDLLIGMVPIVNLEWIQKFVRDTRDRGHSREAVM
CCCCCEEEEECCCCCEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHH
DSIVRSMDDYLNYITPQFSRTHINFQRVPTVDTSNPLNAKGIPSLDESFVVIRFRGLSKV
HHHHHHHHHHHHHHCCCCCCEEECEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
DFPYLLAMIDGSFMSRHNTLVVPGGKMSFAMELIIRPLLQQLIDTGKIN
CHHHHHHHHCCHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1756168; 7940673; 7984428; 7920643 [H]