Definition Clavibacter michiganensis subsp. sepedonicus chromosome, complete genome.
Accession NC_010407
Length 3,258,645

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 170783086

GI number:

Start: 2931387

End: 2933414

Strand: Reverse

Name: Not Available

Synonym: CMS_2785

Alternate gene names: NA

Gene position: NA

Preceding gene: 170783087

Following gene: 170783084

Centisome position: NA

GC content: NA

Gene sequence:

>2028_bases
GTGGTGATGCCCTACTCGGAGGAGGTGGTCTCGGGCATGGCACTGCGGGACTGCGCGGGACATCTCGGTCCACGGCCGGC
GGAGTTCGGGGTCCACGGCGTCGACGGCACGAGCATCGGGTTCGACGACGCGATGGCCGGCCGGCACGTGCTCTACCTCG
GCGGCATCGGCACGGGGAAGACCGTGGGCATCTCCGCGCTCGTCGCCTCCGTGCGCGCGAGCATGACCGCCGACGACGTG
ATGGTCGTGTTCGACACGAAGGGCGACTACCACGAGACGTTCCACCGGCCGGGTGACGCGGTCATCGCGGCCACGCTCGC
CGACGAGTTCGCGGGGCAGGTGTCGTGGAACCTGTTCGAGGAGTTCCGCGCGCTGCCCCCGGGCCGCCTGCCGGAGGACG
AGATCTTCGAGATGTGCAGTGGCCTGTTCTCGCGTCTCATTGCCGACGCCGGCGACAACGCCTACTTCGCCAACGCGGCG
CGCGACGTGTTCACGGCCCTCGTCACCGCGATGTACCGGGAATCCGAGGAGCGGTCGAACTGCGACATCCGCATGATCGT
CGGCGGCATGGGCACGTCCGAGATGCACGCGCTGCTGGACCGTCCAGAGAACGCCGACCTCCGCGGCGCGCGGCACTACA
TCGCCAAGGAGGGGTCGAACTCGACCATGGCGACGATGGCGTTCATGCAGCAGGTGATCCAGGAGTCGTTCCGCTCGTCG
TTCGGGCGGCCGGGCGACTTCTCCATCCGCGCCTTCCTCCGCGCGAAGGGCGCGCGGGCGCTCTTCCTCGAGTACGACAT
CGCCTCGGGCAGCACGCTCGCACCGGTGTTCACGACCATGCTCGACGTCGCGATGAAGGAGGCCATGTCCCGACGCCGCG
CGGGCGGGCGCGTGTTCTTCGTGCTCGACGAGTTCGCGCTGCTCCCCGAGCTGACGCACCTCTCCGACGGCGTGAACTTC
GGCCGGTCGCTCGGGCTGCGGTTCATCGTCGGCACCCAGAACGTCAAGCAGGTGCAGGAGATGTACGGGCCGGAGATGGC
CGCGTCGGTGCTGTCGGCGTTCGGATCCGTGTTCGCGTTCCGCCTCTACGACGGGGACTCGCGACGCTTCGTCGGCGACC
GCTTCGGCGCGAACCGCAAGCTGACGCGCTTCGACGCGTCCGTGCGCGGGTCGGGACTCCGCGAGGAGGTCATCACAGGG
GCGGTGGTCGAGGACTGGGACCTGTCGAGCCTCGGCGTGGGGACCTGCATCGCGGCCATTCCGGACGGCCCGCCGGTGTC
CGGTTCCGGTTCGCGGCGCCGTCGGCGTAGGCGTCGCCCACGTCGCGGGAGGACCGCGGGGCAGAGCTCCGGCGAGCCGC
ACCGCGCCGTCGGTAGCATCGCCAGCCGGGGTGCGCGCCTGAGCATGCGCGACGCATCGGAGCAGGCCCACGACAGAGAA
GGAGGACCCATGCACGTCGTCCCGCTCGGGTACATCGGCGAATTCGAGGGCAAGCCGAACCTCGCACTGCTGGATCCGCT
CACGTCGAAGACCAGGCACCACACGCTCGCGCCGGAGACGGCCCAGCTGCTGCGGTCGATCGACCCGACCCTGTCCGACC
AGGATCTCGACGAGCAGGAGCGCCGTCTCCTCGTGGGGTACGCGAAGCTCGGCATCGTCGCCCTCATCGGCGACGACGCA
CCTCTCTTGGCCCTGGACGTCATACCCGTGCCGCGCGTGGACATCATCCTCGATGAGGTGCTCGACGACGGATACCGCTT
CAGCTCGGGATCCGACGAGCCGTTCGAGCTGACCGAGTATGGCGCCAGGTTCCTCACCAAAGCCGACGGCCGACGCACGC
TCGGGGAGATCGCGGAGGCGACGCGCGACGAGGCCCTCGCGGACGAGGCCGACCGCGCCGCGATCGAGGAGGGCGTGGCG
CGCACCGGGCAGTCGTTCGAGCGCTTCCTGATGGACGAGGCCTACCGCCTCATCGCCGCCCTCCAGGGTCGCGTGGCCGT
GACGTTCGAGGCGACCGAGCGAACGTGA

Upstream 100 bases:

>100_bases
GCCCTGCGCGGACGAGAGGCGATCACGTTCGAAGCGACCGCCGGGGAACGGGCGTGAGCGCCGTGCTGCCTCTCACGCTC
CCCGCATCCGTGCGCCCGGA

Downstream 100 bases:

>100_bases
AGGGCCGCCGGGTGCTGGGCGGCGTCCTGGTAGGAGGAGTCGCCTTCATCGGCGCCGCGGGCATCCCCTCTCATGCCGAC
GGAACGGATCCGAACGCGCT

Product: putative conjugal trasnfer protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>675_residues
MVMPYSEEVVSGMALRDCAGHLGPRPAEFGVHGVDGTSIGFDDAMAGRHVLYLGGIGTGKTVGISALVASVRASMTADDV
MVVFDTKGDYHETFHRPGDAVIAATLADEFAGQVSWNLFEEFRALPPGRLPEDEIFEMCSGLFSRLIADAGDNAYFANAA
RDVFTALVTAMYRESEERSNCDIRMIVGGMGTSEMHALLDRPENADLRGARHYIAKEGSNSTMATMAFMQQVIQESFRSS
FGRPGDFSIRAFLRAKGARALFLEYDIASGSTLAPVFTTMLDVAMKEAMSRRRAGGRVFFVLDEFALLPELTHLSDGVNF
GRSLGLRFIVGTQNVKQVQEMYGPEMAASVLSAFGSVFAFRLYDGDSRRFVGDRFGANRKLTRFDASVRGSGLREEVITG
AVVEDWDLSSLGVGTCIAAIPDGPPVSGSGSRRRRRRRRPRRGRTAGQSSGEPHRAVGSIASRGARLSMRDASEQAHDRE
GGPMHVVPLGYIGEFEGKPNLALLDPLTSKTRHHTLAPETAQLLRSIDPTLSDQDLDEQERRLLVGYAKLGIVALIGDDA
PLLALDVIPVPRVDIILDEVLDDGYRFSSGSDEPFELTEYGARFLTKADGRRTLGEIAEATRDEALADEADRAAIEEGVA
RTGQSFERFLMDEAYRLIAALQGRVAVTFEATERT

Sequences:
NA

Specific function: NA

COG id: COG3505

COG function: function code U; Type IV secretory pathway, VirD4 components

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA