| Definition | Clavibacter michiganensis subsp. sepedonicus chromosome, complete genome. |
|---|---|
| Accession | NC_010407 |
| Length | 3,258,645 |
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Identifier: 170781519
GI number:
Start: 1159991
End: 1162156
Strand: Reverse
Name: Not Available
Synonym: CMS_1107
Alternate gene names: NA
Gene position: NA
Preceding gene: 170781520
Following gene: 170781515
Centisome position: NA
GC content: NA
Gene sequence:
>2166_bases ATGACCGACCCCGCCGTCCCGGCCGTCTCCTCCCCCGCATCCGACTCCTCCGCCACCCCTCCCGTCGCGGAGCAGCGCCC CATCGAGCGCACCTTCCACGGCGACACGTTCGTGGACCGCTACGAGTGGCTGCGCGACAAGGACGACGCCGACGTCATCG CGCACCTCGAGGCCGAGAACGCGTACACGGATCAGGCCACCGCGCATCTGGAGCCGTTGCGCGAGCAGCTGTTCACGGAG ATCAAGGACCGCACGCAGGAGACCGACCTCTCCGTCCCCGTCCGCGAGGGCGACTGGTGGTACTACGCGCGCACGGTCGA GGGGTCGCAGTACGCGATCCGCTGCCGCCGCCCCGTCGCCGGCCCGGACGACTGGACCCCGCCCGTCATCGAGCCCGCCG CCGACGGCACGGCCACCCCCGGCGAGCAGGTGCTGCTCGACTCCAACGCCGAGGCCGACGGCCACGAGTTCTTCTCGCTC GGCGCGTTCGAGGTCAGCCCCGACGGATCGCTCCTCGCCTACTCCGTCGACGTCGAGGGCGACGAGCGCTTCCTGCTCAA GATCCGGGACCTCACGACGGGCGAGGACCTCGCCGACGAGATCCCCGGCACCAGCCACGGCGCCACCTTCTCGGCCCACG GCGACCACCTCTTCTACGTCACGGTGGATGACGCGTGGCGCCCCGACACCGTGTGGCGCCACCGCGTCGGCAGCCCCGCG TCGCAGGACGTGAAGGTGTTCACCGAGCCCGACGAGAGCTACTTCGTCGGCTTCGGCATGACGCGCAGCCGCCAGTACCT CGTCATCGAGGTCGGCTCGAAGATCACGACCGAGGTGCTCCTGCTCGACGCCGGGGATCCCACGGGCGCGTTCCGCTCGG TGTGGCCGCGCCGGCACGGGGTCGAGTACGACGTCGACCACGCGGTCATCGACGGATCCGACCGGCTCCTCATCCTGCAC AACGACGGCGCCACCAACTTCGAGCTGATCGACGTGCCGGCCGACGACCCGACGTCCACGACCGACCGGCAGGTCGTCAT CCCCCACGACGACGAGGTCCGCCTCGAGGACGCCAGCGCGTTCGCCGACCACCTCGTGATCTCCTACCGCCGCGAGGGCC TCACGCGCGTCGGGGTGATCCCCTTCGACCGCGTCCTCGACGGCGAGCAGCTGCACGAGATCGCGTTCGACGAGCCGATC TACACGGTCGGAACAGCGGGCAACCCCGAGTTCGCGCAGCCCACCGTCCGCCTCGGCTACACGAGCCTCGCGACGCCGGC CACCACCTATGACTACGTGCTCGCGACGCGCGAGCTGCGCCTCCTCAAGCAGCAGCCCGTGCGCGGCGGCTACGACCCGG ACGACTACGTGCAGACCCGCGAGTGGGCGACCGCGGAGGACGGCACGGAGATCCCGCTCTCGGTGATCTACAAGCGCGGC CTCGTGCACCCGGGCACGCCGGCGCCGCTCCTGCTCTACGGCTACGGCTCCTACGAGGCGAGCATCGACCCATCGTTCTC CATCGCGCGGCTGTCGCTGCTCGACCGGGGCATGGCGTTCGTCATCGCGCACGTGCGCGGCGGCGGCGAGATGGGCCGGC GCTGGTACGACGAGGGCAAGACGCTCACCAAGAAGAACACCTTCACCGACTTCGTGGCGGCGGCCGACCACCTCATCGCG CGCGGGTGGACCAGCCCGGAGAAGCTCGTCGCCGAGGGCCGCAGCGCCGGCGGGCTCCTGATGGGCGCGGTCGCGAATAT CGCGCCCGACCGGTTCGCCGGGATCCTCGCGGGCGTGCCGTTCGTGGACGCGCTGACGAGCATCCTCGACCCGTCGCTGC CGCTCACCGTGATCGAGTGGGACGAGTGGGGCGACCCGCTGCACGACCCCGAGGTGTACGCGTACATGAAGTCGTACACG CCGTACGAGAACGTGCGGGAGGGCGTGGAGTACCCGCGGATCCTCGCGGTCACGAGCCTCAACGACACGCGCGTGCTCTA CGTCGAGCCCGCCAAGTGGACGACCCGCCTCCGCGAGGTCGGCGCGCCCGTGCTGCTGCGCACCGAGATGCAGGCCGGCC ACGGCGGCAAGTCGGGCCGCTACGACGCGTGGCGCGAGCGCGCCTCCGACTACGCGTGGGTGCTCGACGTGGCGGGGCTG GCCTAG
Upstream 100 bases:
>100_bases GGTGGGAGGGGCGCTCATCGTGGTCGGGGCCATCGCTGCGGTGGTCCGCGGCCGTCGCCGACGCGGATCCGCCTCGGGCG CCCGTCGGTAGGCTGGCCGG
Downstream 100 bases:
>100_bases GGGTCAACAGACACAGGTCGCGTTCTGCGCAAGCGGGGCTCAGGCGGTTTTCGACGAGCTAAAGCCTGCTTCTGCTTTGA CGCGAACTCGACCTGCTGAC
Product: putative protease
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>721_residues MTDPAVPAVSSPASDSSATPPVAEQRPIERTFHGDTFVDRYEWLRDKDDADVIAHLEAENAYTDQATAHLEPLREQLFTE IKDRTQETDLSVPVREGDWWYYARTVEGSQYAIRCRRPVAGPDDWTPPVIEPAADGTATPGEQVLLDSNAEADGHEFFSL GAFEVSPDGSLLAYSVDVEGDERFLLKIRDLTTGEDLADEIPGTSHGATFSAHGDHLFYVTVDDAWRPDTVWRHRVGSPA SQDVKVFTEPDESYFVGFGMTRSRQYLVIEVGSKITTEVLLLDAGDPTGAFRSVWPRRHGVEYDVDHAVIDGSDRLLILH NDGATNFELIDVPADDPTSTTDRQVVIPHDDEVRLEDASAFADHLVISYRREGLTRVGVIPFDRVLDGEQLHEIAFDEPI YTVGTAGNPEFAQPTVRLGYTSLATPATTYDYVLATRELRLLKQQPVRGGYDPDDYVQTREWATAEDGTEIPLSVIYKRG LVHPGTPAPLLLYGYGSYEASIDPSFSIARLSLLDRGMAFVIAHVRGGGEMGRRWYDEGKTLTKKNTFTDFVAAADHLIA RGWTSPEKLVAEGRSAGGLLMGAVANIAPDRFAGILAGVPFVDALTSILDPSLPLTVIEWDEWGDPLHDPEVYAYMKSYT PYENVREGVEYPRILAVTSLNDTRVLYVEPAKWTTRLREVGAPVLLRTEMQAGHGGKSGRYDAWRERASDYAWVLDVAGL A
Sequences:
NA
Specific function: NA
COG id: COG1770
COG function: function code E; Protease II
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA