| Definition | Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome. |
|---|---|
| Accession | NC_010503 |
| Length | 751,679 |
Click here to switch to the map view.
The map label for this gene is 170762422
Identifier: 170762422
GI number: 170762422
Start: 403647
End: 405314
Strand: Direct
Name: 170762422
Synonym: UPA3_0372
Alternate gene names: NA
Gene position: 403647-405314 (Clockwise)
Preceding gene: 170762213
Following gene: 170761911
Centisome position: 53.7
GC content: 29.8
Gene sequence:
>1668_bases ATGAAGATGAAAGCTAAGAAATTTTTAATTACAGGATTATTAGGTGTAGTTAGTTTAGCAACTATTACCACAGTAGCTAC AGCTTGTACAAATGGCAATAATCAAAAGGCTAATACAGTAAATAATAAGTCTGATTTAAAAACAAATCCAAATATTAATT TAACTCAACAAGATGTAGAAAATTTGGAAAAACAAAGACAACAATGAAGTGAAGATTTAGATGTTTATTTTAATGGTGGG TTAAGTAAAAGTGGCAAAAATTTTGACCGTATAAATACATTATCATCAAATGCAACGGAATGATTTAAGAATCATCAAAA ATTAGCGGCAACACGTGATTCTGGATCATTGGTACAAGATGATGCAGCTTATTCATTTGGAATTGCACCCGATTATGTTC ATTATAAATGAGTTTCAAAAGATGGTGGCGACGTTTCTCCATCATATTTAAAACCATATTGAAATAAAAATTTAACTGAA GGTAGAAACTTTTCAAAATTAGACCCAAAGACTTTGGATGATAATGGAATCGGTGTTTTATTAATATCTGATCACCATTA TGGTAAATGAAATGATAATTTTTTAAGCAAAAAAACTGTTGGTGGATTAATTATGCAATCACGAGTTTCTGGTTTGCCAT CACACTATCCTGCTGTTCTAACACCAAAATTTTTATTTGATCCTAATTTAAATCCAAATTTAAAAAAATATGCTTCTGCT AATTATGCGTTACCTAATTATTACTCTGACCCACTAGATGGGATTATTTTAACAGGAAAAACTTTAGATCGTATTTATGA TGCTAAAAAGTTTTCTAATGTTTATAATGCACATGTAGCTGGCAAAACACATTTTGAGACATTCACAGATTTTGCAAAGG CAATGGTTGATGAAACGCGTCGTGGAATTTCACAATGATCTTTAAAAAATGATAAATGAAAAGATAAAACAGTTTTAATG GTTATGCCTAACTTTACTCCAACAGCTAAAATGGTAGATGTTAATTTTAAACCAGAAGACTTAGAATTCTTGAGTAATGT TTGCATTAATGAACCTATGTATTGTCCAACAATATATAGTGATCCAAATGATAAATATTTACCTGGATTAGGTGCAAAAT TCCCTATTCCAGTAAATCATATTTCACAAGTGCAAAATTATATTGATGATTATGGACAAATTGGTGGAAAAGTATTAAAT GGTACTGGTAATCCAGAAGCATCAAAACAAGTTGGCCCAACTTTAGGTGATGCTTTTAAAGATACAAGTGACGTTGTAGT TTTCTGTTATAACGAATACGGTTTATTAAATTACAAACCCGGAACTGAAGAAGGCGAAGCTTTAGTACAACAATTTGAAA AGAATTTAACAAATTATGTTAATGGTTTAACAAAAGAAACAAAAAATCAATTTGTGCCAACAAAAGTTTTAAAAGAAAAA CCAGTCGTGGGTAAGAATTTCTTTATTGAACGTAAAGGTAAGTTCTATGATGCATGTTATGGTTTTGCTGGTCAAGATTT AGTAGTTAATACATTAAATAAATGAACAAGGGGAGCTAACGCTCAAAATATAGATTTAGGGTATCCTATTTTTAATAAAA ATACAGTTAAACACATTAGAGCATTTAAGGATTCTTTAGGTGTTAAAGTTTTAGACAAACAAAAATAG
Upstream 100 bases:
>100_bases AATGGCTATTATAAAAAAAACATAAACTTTCATGGTTTATTTTTTGTTTAAAGTAGTTGTATATTTAATTATTATAAATA GAGTAAGGACTAATCATTTT
Downstream 100 bases:
>100_bases AGAAATAAATAGTTATGCAAATAAAACAAGTAAATATTAATAAAAAAGATCTTTCTATTTATAAAAAACTCATTGAAGCA AAAAAATTTGTTAGTACACA
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 555; Mature: 555
Protein sequence:
>555_residues MKMKAKKFLITGLLGVVSLATITTVATACTNGNNQKANTVNNKSDLKTNPNINLTQQDVENLEKQRQQWSEDLDVYFNGG LSKSGKNFDRINTLSSNATEWFKNHQKLAATRDSGSLVQDDAAYSFGIAPDYVHYKWVSKDGGDVSPSYLKPYWNKNLTE GRNFSKLDPKTLDDNGIGVLLISDHHYGKWNDNFLSKKTVGGLIMQSRVSGLPSHYPAVLTPKFLFDPNLNPNLKKYASA NYALPNYYSDPLDGIILTGKTLDRIYDAKKFSNVYNAHVAGKTHFETFTDFAKAMVDETRRGISQWSLKNDKWKDKTVLM VMPNFTPTAKMVDVNFKPEDLEFLSNVCINEPMYCPTIYSDPNDKYLPGLGAKFPIPVNHISQVQNYIDDYGQIGGKVLN GTGNPEASKQVGPTLGDAFKDTSDVVVFCYNEYGLLNYKPGTEEGEALVQQFEKNLTNYVNGLTKETKNQFVPTKVLKEK PVVGKNFFIERKGKFYDACYGFAGQDLVVNTLNKWTRGANAQNIDLGYPIFNKNTVKHIRAFKDSLGVKVLDKQK
Sequences:
>Translated_555_residues MKMKAKKFLITGLLGVVSLATITTVATACTNGNNQKANTVNNKSDLKTNPNINLTQQDVENLEKQRQQ*SEDLDVYFNGG LSKSGKNFDRINTLSSNATE*FKNHQKLAATRDSGSLVQDDAAYSFGIAPDYVHYK*VSKDGGDVSPSYLKPY*NKNLTE GRNFSKLDPKTLDDNGIGVLLISDHHYGK*NDNFLSKKTVGGLIMQSRVSGLPSHYPAVLTPKFLFDPNLNPNLKKYASA NYALPNYYSDPLDGIILTGKTLDRIYDAKKFSNVYNAHVAGKTHFETFTDFAKAMVDETRRGISQ*SLKNDK*KDKTVLM VMPNFTPTAKMVDVNFKPEDLEFLSNVCINEPMYCPTIYSDPNDKYLPGLGAKFPIPVNHISQVQNYIDDYGQIGGKVLN GTGNPEASKQVGPTLGDAFKDTSDVVVFCYNEYGLLNYKPGTEEGEALVQQFEKNLTNYVNGLTKETKNQFVPTKVLKEK PVVGKNFFIERKGKFYDACYGFAGQDLVVNTLNK*TRGANAQNIDLGYPIFNKNTVKHIRAFKDSLGVKVLDKQK >Mature_555_residues MKMKAKKFLITGLLGVVSLATITTVATACTNGNNQKANTVNNKSDLKTNPNINLTQQDVENLEKQRQQ*SEDLDVYFNGG LSKSGKNFDRINTLSSNATE*FKNHQKLAATRDSGSLVQDDAAYSFGIAPDYVHYK*VSKDGGDVSPSYLKPY*NKNLTE GRNFSKLDPKTLDDNGIGVLLISDHHYGK*NDNFLSKKTVGGLIMQSRVSGLPSHYPAVLTPKFLFDPNLNPNLKKYASA NYALPNYYSDPLDGIILTGKTLDRIYDAKKFSNVYNAHVAGKTHFETFTDFAKAMVDETRRGISQ*SLKNDK*KDKTVLM VMPNFTPTAKMVDVNFKPEDLEFLSNVCINEPMYCPTIYSDPNDKYLPGLGAKFPIPVNHISQVQNYIDDYGQIGGKVLN GTGNPEASKQVGPTLGDAFKDTSDVVVFCYNEYGLLNYKPGTEEGEALVQQFEKNLTNYVNGLTKETKNQFVPTKVLKEK PVVGKNFFIERKGKFYDACYGFAGQDLVVNTLNK*TRGANAQNIDLGYPIFNKNTVKHIRAFKDSLGVKVLDKQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60571; Mature: 60571
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMKAKKFLITGLLGVVSLATITTVATACTNGNNQKANTVNNKSDLKTNPNINLTQQDVE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH NLEKQRQQSEDLDVYFNGGLSKSGKNFDRINTLSSNATEFKNHQKLAATRDSGSLVQDDA HHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHCCCCHHHHHCCHHHEEECCCCCEEECCC AYSFGIAPDYVHYKVSKDGGDVSPSYLKPYNKNLTEGRNFSKLDPKTLDDNGIGVLLISD CEECCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC HHYGKNDNFLSKKTVGGLIMQSRVSGLPSHYPAVLTPKFLFDPNLNPNLKKYASANYALP CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHHCCCCCCCC NYYSDPLDGIILTGKTLDRIYDAKKFSNVYNAHVAGKTHFETFTDFAKAMVDETRRGISQ CCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH SLKNDKKDKTVLMVMPNFTPTAKMVDVNFKPEDLEFLSNVCINEPMYCPTIYSDPNDKYL HHHCCCCCCEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCC PGLGAKFPIPVNHISQVQNYIDDYGQIGGKVLNGTGNPEASKQVGPTLGDAFKDTSDVVV CCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHCCCCHHHHHCCCCCEEE FCYNEYGLLNYKPGTEEGEALVQQFEKNLTNYVNGLTKETKNQFVPTKVLKEKPVVGKNF EEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCE FIERKGKFYDACYGFAGQDLVVNTLNKTRGANAQNIDLGYPIFNKNTVKHIRAFKDSLGV EEECCCCCHHHHHCCCCCCCEEECHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCE KVLDKQK EEECCCC >Mature Secondary Structure MKMKAKKFLITGLLGVVSLATITTVATACTNGNNQKANTVNNKSDLKTNPNINLTQQDVE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH NLEKQRQQSEDLDVYFNGGLSKSGKNFDRINTLSSNATEFKNHQKLAATRDSGSLVQDDA HHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHCCCCHHHHHCCHHHEEECCCCCEEECCC AYSFGIAPDYVHYKVSKDGGDVSPSYLKPYNKNLTEGRNFSKLDPKTLDDNGIGVLLISD CEECCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC HHYGKNDNFLSKKTVGGLIMQSRVSGLPSHYPAVLTPKFLFDPNLNPNLKKYASANYALP CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHHCCCCCCCC NYYSDPLDGIILTGKTLDRIYDAKKFSNVYNAHVAGKTHFETFTDFAKAMVDETRRGISQ CCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH SLKNDKKDKTVLMVMPNFTPTAKMVDVNFKPEDLEFLSNVCINEPMYCPTIYSDPNDKYL HHHCCCCCCEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCC PGLGAKFPIPVNHISQVQNYIDDYGQIGGKVLNGTGNPEASKQVGPTLGDAFKDTSDVVV CCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHCCCCHHHHHCCCCCEEE FCYNEYGLLNYKPGTEEGEALVQQFEKNLTNYVNGLTKETKNQFVPTKVLKEKPVVGKNF EEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCE FIERKGKFYDACYGFAGQDLVVNTLNKTRGANAQNIDLGYPIFNKNTVKHIRAFKDSLGV EEECCCCCHHHHHCCCCCCCEEECHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCE KVLDKQK EEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA