Definition Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome.
Accession NC_010503
Length 751,679

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The map label for this gene is 170762422

Identifier: 170762422

GI number: 170762422

Start: 403647

End: 405314

Strand: Direct

Name: 170762422

Synonym: UPA3_0372

Alternate gene names: NA

Gene position: 403647-405314 (Clockwise)

Preceding gene: 170762213

Following gene: 170761911

Centisome position: 53.7

GC content: 29.8

Gene sequence:

>1668_bases
ATGAAGATGAAAGCTAAGAAATTTTTAATTACAGGATTATTAGGTGTAGTTAGTTTAGCAACTATTACCACAGTAGCTAC
AGCTTGTACAAATGGCAATAATCAAAAGGCTAATACAGTAAATAATAAGTCTGATTTAAAAACAAATCCAAATATTAATT
TAACTCAACAAGATGTAGAAAATTTGGAAAAACAAAGACAACAATGAAGTGAAGATTTAGATGTTTATTTTAATGGTGGG
TTAAGTAAAAGTGGCAAAAATTTTGACCGTATAAATACATTATCATCAAATGCAACGGAATGATTTAAGAATCATCAAAA
ATTAGCGGCAACACGTGATTCTGGATCATTGGTACAAGATGATGCAGCTTATTCATTTGGAATTGCACCCGATTATGTTC
ATTATAAATGAGTTTCAAAAGATGGTGGCGACGTTTCTCCATCATATTTAAAACCATATTGAAATAAAAATTTAACTGAA
GGTAGAAACTTTTCAAAATTAGACCCAAAGACTTTGGATGATAATGGAATCGGTGTTTTATTAATATCTGATCACCATTA
TGGTAAATGAAATGATAATTTTTTAAGCAAAAAAACTGTTGGTGGATTAATTATGCAATCACGAGTTTCTGGTTTGCCAT
CACACTATCCTGCTGTTCTAACACCAAAATTTTTATTTGATCCTAATTTAAATCCAAATTTAAAAAAATATGCTTCTGCT
AATTATGCGTTACCTAATTATTACTCTGACCCACTAGATGGGATTATTTTAACAGGAAAAACTTTAGATCGTATTTATGA
TGCTAAAAAGTTTTCTAATGTTTATAATGCACATGTAGCTGGCAAAACACATTTTGAGACATTCACAGATTTTGCAAAGG
CAATGGTTGATGAAACGCGTCGTGGAATTTCACAATGATCTTTAAAAAATGATAAATGAAAAGATAAAACAGTTTTAATG
GTTATGCCTAACTTTACTCCAACAGCTAAAATGGTAGATGTTAATTTTAAACCAGAAGACTTAGAATTCTTGAGTAATGT
TTGCATTAATGAACCTATGTATTGTCCAACAATATATAGTGATCCAAATGATAAATATTTACCTGGATTAGGTGCAAAAT
TCCCTATTCCAGTAAATCATATTTCACAAGTGCAAAATTATATTGATGATTATGGACAAATTGGTGGAAAAGTATTAAAT
GGTACTGGTAATCCAGAAGCATCAAAACAAGTTGGCCCAACTTTAGGTGATGCTTTTAAAGATACAAGTGACGTTGTAGT
TTTCTGTTATAACGAATACGGTTTATTAAATTACAAACCCGGAACTGAAGAAGGCGAAGCTTTAGTACAACAATTTGAAA
AGAATTTAACAAATTATGTTAATGGTTTAACAAAAGAAACAAAAAATCAATTTGTGCCAACAAAAGTTTTAAAAGAAAAA
CCAGTCGTGGGTAAGAATTTCTTTATTGAACGTAAAGGTAAGTTCTATGATGCATGTTATGGTTTTGCTGGTCAAGATTT
AGTAGTTAATACATTAAATAAATGAACAAGGGGAGCTAACGCTCAAAATATAGATTTAGGGTATCCTATTTTTAATAAAA
ATACAGTTAAACACATTAGAGCATTTAAGGATTCTTTAGGTGTTAAAGTTTTAGACAAACAAAAATAG

Upstream 100 bases:

>100_bases
AATGGCTATTATAAAAAAAACATAAACTTTCATGGTTTATTTTTTGTTTAAAGTAGTTGTATATTTAATTATTATAAATA
GAGTAAGGACTAATCATTTT

Downstream 100 bases:

>100_bases
AGAAATAAATAGTTATGCAAATAAAACAAGTAAATATTAATAAAAAAGATCTTTCTATTTATAAAAAACTCATTGAAGCA
AAAAAATTTGTTAGTACACA

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 555; Mature: 555

Protein sequence:

>555_residues
MKMKAKKFLITGLLGVVSLATITTVATACTNGNNQKANTVNNKSDLKTNPNINLTQQDVENLEKQRQQWSEDLDVYFNGG
LSKSGKNFDRINTLSSNATEWFKNHQKLAATRDSGSLVQDDAAYSFGIAPDYVHYKWVSKDGGDVSPSYLKPYWNKNLTE
GRNFSKLDPKTLDDNGIGVLLISDHHYGKWNDNFLSKKTVGGLIMQSRVSGLPSHYPAVLTPKFLFDPNLNPNLKKYASA
NYALPNYYSDPLDGIILTGKTLDRIYDAKKFSNVYNAHVAGKTHFETFTDFAKAMVDETRRGISQWSLKNDKWKDKTVLM
VMPNFTPTAKMVDVNFKPEDLEFLSNVCINEPMYCPTIYSDPNDKYLPGLGAKFPIPVNHISQVQNYIDDYGQIGGKVLN
GTGNPEASKQVGPTLGDAFKDTSDVVVFCYNEYGLLNYKPGTEEGEALVQQFEKNLTNYVNGLTKETKNQFVPTKVLKEK
PVVGKNFFIERKGKFYDACYGFAGQDLVVNTLNKWTRGANAQNIDLGYPIFNKNTVKHIRAFKDSLGVKVLDKQK

Sequences:

>Translated_555_residues
MKMKAKKFLITGLLGVVSLATITTVATACTNGNNQKANTVNNKSDLKTNPNINLTQQDVENLEKQRQQ*SEDLDVYFNGG
LSKSGKNFDRINTLSSNATE*FKNHQKLAATRDSGSLVQDDAAYSFGIAPDYVHYK*VSKDGGDVSPSYLKPY*NKNLTE
GRNFSKLDPKTLDDNGIGVLLISDHHYGK*NDNFLSKKTVGGLIMQSRVSGLPSHYPAVLTPKFLFDPNLNPNLKKYASA
NYALPNYYSDPLDGIILTGKTLDRIYDAKKFSNVYNAHVAGKTHFETFTDFAKAMVDETRRGISQ*SLKNDK*KDKTVLM
VMPNFTPTAKMVDVNFKPEDLEFLSNVCINEPMYCPTIYSDPNDKYLPGLGAKFPIPVNHISQVQNYIDDYGQIGGKVLN
GTGNPEASKQVGPTLGDAFKDTSDVVVFCYNEYGLLNYKPGTEEGEALVQQFEKNLTNYVNGLTKETKNQFVPTKVLKEK
PVVGKNFFIERKGKFYDACYGFAGQDLVVNTLNK*TRGANAQNIDLGYPIFNKNTVKHIRAFKDSLGVKVLDKQK
>Mature_555_residues
MKMKAKKFLITGLLGVVSLATITTVATACTNGNNQKANTVNNKSDLKTNPNINLTQQDVENLEKQRQQ*SEDLDVYFNGG
LSKSGKNFDRINTLSSNATE*FKNHQKLAATRDSGSLVQDDAAYSFGIAPDYVHYK*VSKDGGDVSPSYLKPY*NKNLTE
GRNFSKLDPKTLDDNGIGVLLISDHHYGK*NDNFLSKKTVGGLIMQSRVSGLPSHYPAVLTPKFLFDPNLNPNLKKYASA
NYALPNYYSDPLDGIILTGKTLDRIYDAKKFSNVYNAHVAGKTHFETFTDFAKAMVDETRRGISQ*SLKNDK*KDKTVLM
VMPNFTPTAKMVDVNFKPEDLEFLSNVCINEPMYCPTIYSDPNDKYLPGLGAKFPIPVNHISQVQNYIDDYGQIGGKVLN
GTGNPEASKQVGPTLGDAFKDTSDVVVFCYNEYGLLNYKPGTEEGEALVQQFEKNLTNYVNGLTKETKNQFVPTKVLKEK
PVVGKNFFIERKGKFYDACYGFAGQDLVVNTLNK*TRGANAQNIDLGYPIFNKNTVKHIRAFKDSLGVKVLDKQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60571; Mature: 60571

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMKAKKFLITGLLGVVSLATITTVATACTNGNNQKANTVNNKSDLKTNPNINLTQQDVE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
NLEKQRQQSEDLDVYFNGGLSKSGKNFDRINTLSSNATEFKNHQKLAATRDSGSLVQDDA
HHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHCCCCHHHHHCCHHHEEECCCCCEEECCC
AYSFGIAPDYVHYKVSKDGGDVSPSYLKPYNKNLTEGRNFSKLDPKTLDDNGIGVLLISD
CEECCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC
HHYGKNDNFLSKKTVGGLIMQSRVSGLPSHYPAVLTPKFLFDPNLNPNLKKYASANYALP
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHHCCCCCCCC
NYYSDPLDGIILTGKTLDRIYDAKKFSNVYNAHVAGKTHFETFTDFAKAMVDETRRGISQ
CCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SLKNDKKDKTVLMVMPNFTPTAKMVDVNFKPEDLEFLSNVCINEPMYCPTIYSDPNDKYL
HHHCCCCCCEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCC
PGLGAKFPIPVNHISQVQNYIDDYGQIGGKVLNGTGNPEASKQVGPTLGDAFKDTSDVVV
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHCCCCHHHHHCCCCCEEE
FCYNEYGLLNYKPGTEEGEALVQQFEKNLTNYVNGLTKETKNQFVPTKVLKEKPVVGKNF
EEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCE
FIERKGKFYDACYGFAGQDLVVNTLNKTRGANAQNIDLGYPIFNKNTVKHIRAFKDSLGV
EEECCCCCHHHHHCCCCCCCEEECHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCE
KVLDKQK
EEECCCC
>Mature Secondary Structure
MKMKAKKFLITGLLGVVSLATITTVATACTNGNNQKANTVNNKSDLKTNPNINLTQQDVE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
NLEKQRQQSEDLDVYFNGGLSKSGKNFDRINTLSSNATEFKNHQKLAATRDSGSLVQDDA
HHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHCCCCHHHHHCCHHHEEECCCCCEEECCC
AYSFGIAPDYVHYKVSKDGGDVSPSYLKPYNKNLTEGRNFSKLDPKTLDDNGIGVLLISD
CEECCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC
HHYGKNDNFLSKKTVGGLIMQSRVSGLPSHYPAVLTPKFLFDPNLNPNLKKYASANYALP
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHHCCCCCCCC
NYYSDPLDGIILTGKTLDRIYDAKKFSNVYNAHVAGKTHFETFTDFAKAMVDETRRGISQ
CCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SLKNDKKDKTVLMVMPNFTPTAKMVDVNFKPEDLEFLSNVCINEPMYCPTIYSDPNDKYL
HHHCCCCCCEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCC
PGLGAKFPIPVNHISQVQNYIDDYGQIGGKVLNGTGNPEASKQVGPTLGDAFKDTSDVVV
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHCCCCHHHHHCCCCCEEE
FCYNEYGLLNYKPGTEEGEALVQQFEKNLTNYVNGLTKETKNQFVPTKVLKEKPVVGKNF
EEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCE
FIERKGKFYDACYGFAGQDLVVNTLNKTRGANAQNIDLGYPIFNKNTVKHIRAFKDSLGV
EEECCCCCHHHHHCCCCCCCEEECHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCE
KVLDKQK
EEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA