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The map label for this gene is 170762353

Identifier: 170762353

GI number: 170762353

Start: 726540

End: 727316

Strand: Direct

Name: 170762353

Synonym: UPA3_0620

Alternate gene names: NA

Gene position: 726540-727316 (Clockwise)

Preceding gene: 170762099

Following gene: NA

Centisome position: 96.66

GC content: 26.9

Gene sequence:

>777_bases
ATGGCATATAAGATTAAAGATTTAGATTCTAAATTATTAAGTGATTTAAAAATTGATTTTAATCACAGACATCAATGATA
CATTGTTACGGTAGTAAGCGGTAATGAACAAAAAGTTATTGAAAATATTAAAGATAAATTAAATGGCTATGGTTATGGTG
ATAAATTATCAGATTTAAAAATTATTAAAGAAAAAATTAAAGAAGTTAAAATTTATGAGCCATCAGAAGCGCCACGGTCA
ATGAAGAATCGTGCAAACACAAAATGAGAAACAATAGTTGTTGATGGCGCAACAAAATATCGTTGTACAAAAATAAAAGA
AGGTAATAAATTTAATGGATATATCTTTTTAAAAGCGGAAATGACCGATCAAATTTGGTTTTTAATTCGTAATACCCAAA
TGGTTACTGGTTTAGTTGGTTCATCTGGAAAAAATGTTAAACCAATTCCTGTACCTGAAGATAAGATCTTAAAATTAATT
GCTGATAATGATGCTAAACGTGCTTTAATAAGTCTAAATGAAAAAGTTGACCATGAAGAAAATATTGAAGTTATTGAATT
GCATGAAGACGAAAATTTTACGAACTTTGAAGTTGATCAAGAAGTTAAAATTATCGCAGATACTTTTTTTGGTGAAATTG
CAAAAATTGCAAAAATTGATCAAAACAAGAAAATTGCCACTGTAGAATTTGAATTTTTTGGCCGAATTAACACACTAGAT
TTAAATTTTAATGATATTCAACTTTATGATGAAGAAAGTGATAAGTTAGAAAACTAA

Upstream 100 bases:

>100_bases
ATTGTTATTGTTTTAATTCTTGCTGCAATATTTTTTGGTATTGATACAGGTTTTTATAAATTATCAGCAAAATAAAATTT
TAAAAGTAAAGGAAAAGATT

Downstream 100 bases:

>100_bases
TAAAAATAAAAAAACACTTTACATTTTTGTTTGTAAGGTGTTTTTTATTAAAATGTTTTTAGAAAAACTCATCCTATTTA
TATGAAAGTAATTAATTGAA

Product: transcription termination/antitermination factor NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MAYKIKDLDSKLLSDLKIDFNHRHQWYIVTVVSGNEQKVIENIKDKLNGYGYGDKLSDLKIIKEKIKEVKIYEPSEAPRS
MKNRANTKWETIVVDGATKYRCTKIKEGNKFNGYIFLKAEMTDQIWFLIRNTQMVTGLVGSSGKNVKPIPVPEDKILKLI
ADNDAKRALISLNEKVDHEENIEVIELHEDENFTNFEVDQEVKIIADTFFGEIAKIAKIDQNKKIATVEFEFFGRINTLD
LNFNDIQLYDEESDKLEN

Sequences:

>Translated_258_residues
MAYKIKDLDSKLLSDLKIDFNHRHQ*YIVTVVSGNEQKVIENIKDKLNGYGYGDKLSDLKIIKEKIKEVKIYEPSEAPRS
MKNRANTK*ETIVVDGATKYRCTKIKEGNKFNGYIFLKAEMTDQIWFLIRNTQMVTGLVGSSGKNVKPIPVPEDKILKLI
ADNDAKRALISLNEKVDHEENIEVIELHEDENFTNFEVDQEVKIIADTFFGEIAKIAKIDQNKKIATVEFEFFGRINTLD
LNFNDIQLYDEESDKLEN
>Mature_257_residues
AYKIKDLDSKLLSDLKIDFNHRHQ*YIVTVVSGNEQKVIENIKDKLNGYGYGDKLSDLKIIKEKIKEVKIYEPSEAPRSM
KNRANTK*ETIVVDGATKYRCTKIKEGNKFNGYIFLKAEMTDQIWFLIRNTQMVTGLVGSSGKNVKPIPVPEDKILKLIA
DNDAKRALISLNEKVDHEENIEVIELHEDENFTNFEVDQEVKIIADTFFGEIAKIAKIDQNKKIATVEFEFFGRINTLDL
NFNDIQLYDEESDKLEN

Specific function: Unknown

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010216
- InterPro:   IPR006645 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29447; Mature: 29316

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYKIKDLDSKLLSDLKIDFNHRHQYIVTVVSGNEQKVIENIKDKLNGYGYGDKLSDLKI
CCEEECHHHHHHHHHEEECCCCCEEEEEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHH
IKEKIKEVKIYEPSEAPRSMKNRANTKETIVVDGATKYRCTKIKEGNKFNGYIFLKAEMT
HHHHHHHEEEECCCCCHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCEEEEEEEECC
DQIWFLIRNTQMVTGLVGSSGKNVKPIPVPEDKILKLIADNDAKRALISLNEKVDHEENI
CEEEEEEECCEEEEEEECCCCCCCCCCCCCHHHHEEEEECCCHHHEEEECCCCCCCCCCC
EVIELHEDENFTNFEVDQEVKIIADTFFGEIAKIAKIDQNKKIATVEFEFFGRINTLDLN
EEEEEECCCCCCCEECCCCCEEEHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEC
FNDIQLYDEESDKLEN
CCEEEEEECCCCCCCC
>Mature Secondary Structure 
AYKIKDLDSKLLSDLKIDFNHRHQYIVTVVSGNEQKVIENIKDKLNGYGYGDKLSDLKI
CEEECHHHHHHHHHEEECCCCCEEEEEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHH
IKEKIKEVKIYEPSEAPRSMKNRANTKETIVVDGATKYRCTKIKEGNKFNGYIFLKAEMT
HHHHHHHEEEECCCCCHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCEEEEEEEECC
DQIWFLIRNTQMVTGLVGSSGKNVKPIPVPEDKILKLIADNDAKRALISLNEKVDHEENI
CEEEEEEECCEEEEEEECCCCCCCCCCCCCHHHHEEEEECCCHHHEEEECCCCCCCCCCC
EVIELHEDENFTNFEVDQEVKIIADTFFGEIAKIAKIDQNKKIATVEFEFFGRINTLDLN
EEEEEECCCCCCCEECCCCCEEEHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEEEEC
FNDIQLYDEESDKLEN
CCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8948633; 11271496 [H]