| Definition | Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome. |
|---|---|
| Accession | NC_010503 |
| Length | 751,679 |
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The map label for this gene is 170762350
Identifier: 170762350
GI number: 170762350
Start: 188328
End: 189002
Strand: Reverse
Name: 170762350
Synonym: UPA3_0152
Alternate gene names: NA
Gene position: 189002-188328 (Counterclockwise)
Preceding gene: 170762210
Following gene: 170762171
Centisome position: 25.14
GC content: 22.52
Gene sequence:
>675_bases TTGACTAATGTTAAAATTGCAAATATTGCATTAAATAATGATAATGTTAATAATATTGAACAAAATCATATTTCATTTCG ACATCTATCAACCAATGATATTAAAAATTCTAATGATAAAGTAGAAGCTAAATTTTCAATTGGATTAGGTTTTGATATAT CTGAAAAACTAAAAAATATTGCATTTAAAAAGTTAGACACTAATACTAATAAATTAATTGATATATCTGATCCAACAATT TTACGTTTAACTTTCTACGAATATAATAAAGATCAAAAAGTAGAAAACAATCTTGCTGCACCAACAGATAAAACAAAAAT TTCAGTTGTTGAAATTAAAAAATCACAATTAATGAATTCATCTATTGTTTCTTTTGTAAAAAAATTAAACAAAAATGCTA AGTATCATATGGCTAATATCGCCTTTAACCAACAATTATTACCATATTTAAATAAACAATTCAATGTTAATGCTGATTTT CCAATTGATCTAGAGCAAAATCCAATCGACTTTAATGATAATAAACAAGCCAATGATGAAAAAATTAAAAAGACAAAAGA ATCTGCTATAAAAGTAGCTACAGCAATTGCTAAACAAATTGTTGGAATAGATTATAAAGGAAGAGACATTATTAAAAATT TTATTGAATTAGATAATGTAGTAAATAAAAAATAA
Upstream 100 bases:
>100_bases AATTACGTTTTTTAATACTTTGTAGAAATTTGTTTATCATACTTTGTCGCTCCATAAAACCATATACATAAAGTTTAATA ATCGTGATTATGATGTTAAA
Downstream 100 bases:
>100_bases AAACCAAAAAACCTGTAATTATTAATTAATTATGGGCTTTTAATTTTATTTAGAGAAGAAAAAACCAAACCGTTTTGGTT TGGTTTTTATAATTATAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MTNVKIANIALNNDNVNNIEQNHISFRHLSTNDIKNSNDKVEAKFSIGLGFDISEKLKNIAFKKLDTNTNKLIDISDPTI LRLTFYEYNKDQKVENNLAAPTDKTKISVVEIKKSQLMNSSIVSFVKKLNKNAKYHMANIAFNQQLLPYLNKQFNVNADF PIDLEQNPIDFNDNKQANDEKIKKTKESAIKVATAIAKQIVGIDYKGRDIIKNFIELDNVVNKK
Sequences:
>Translated_224_residues MTNVKIANIALNNDNVNNIEQNHISFRHLSTNDIKNSNDKVEAKFSIGLGFDISEKLKNIAFKKLDTNTNKLIDISDPTI LRLTFYEYNKDQKVENNLAAPTDKTKISVVEIKKSQLMNSSIVSFVKKLNKNAKYHMANIAFNQQLLPYLNKQFNVNADF PIDLEQNPIDFNDNKQANDEKIKKTKESAIKVATAIAKQIVGIDYKGRDIIKNFIELDNVVNKK >Mature_223_residues TNVKIANIALNNDNVNNIEQNHISFRHLSTNDIKNSNDKVEAKFSIGLGFDISEKLKNIAFKKLDTNTNKLIDISDPTIL RLTFYEYNKDQKVENNLAAPTDKTKISVVEIKKSQLMNSSIVSFVKKLNKNAKYHMANIAFNQQLLPYLNKQFNVNADFP IDLEQNPIDFNDNKQANDEKIKKTKESAIKVATAIAKQIVGIDYKGRDIIKNFIELDNVVNKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25516; Mature: 25385
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNVKIANIALNNDNVNNIEQNHISFRHLSTNDIKNSNDKVEAKFSIGLGFDISEKLKNI CCCEEEEEEEECCCCCCCCHHCCEEEEECCCCCCCCCCCCEEEEEEEECCCCHHHHHHHH AFKKLDTNTNKLIDISDPTILRLTFYEYNKDQKVENNLAAPTDKTKISVVEIKKSQLMNS HHHHCCCCCCEEEECCCCEEEEEEEEECCCCCCHHCCCCCCCCCCEEEEEEEHHHHHHHH SIVSFVKKLNKNAKYHMANIAFNQQLLPYLNKQFNVNADFPIDLEQNPIDFNDNKQANDE HHHHHHHHHCCCCCEEEEEEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH KIKKTKESAIKVATAIAKQIVGIDYKGRDIIKNFIELDNVVNKK HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure TNVKIANIALNNDNVNNIEQNHISFRHLSTNDIKNSNDKVEAKFSIGLGFDISEKLKNI CCEEEEEEEECCCCCCCCHHCCEEEEECCCCCCCCCCCCEEEEEEEECCCCHHHHHHHH AFKKLDTNTNKLIDISDPTILRLTFYEYNKDQKVENNLAAPTDKTKISVVEIKKSQLMNS HHHHCCCCCCEEEECCCCEEEEEEEEECCCCCCHHCCCCCCCCCCEEEEEEEHHHHHHHH SIVSFVKKLNKNAKYHMANIAFNQQLLPYLNKQFNVNADFPIDLEQNPIDFNDNKQANDE HHHHHHHHHCCCCCEEEEEEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH KIKKTKESAIKVATAIAKQIVGIDYKGRDIIKNFIELDNVVNKK HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11048724 [H]