| Definition | Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome. |
|---|---|
| Accession | NC_010503 |
| Length | 751,679 |
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The map label for this gene is 170762323
Identifier: 170762323
GI number: 170762323
Start: 680972
End: 682000
Strand: Reverse
Name: 170762323
Synonym: UPA3_0584
Alternate gene names: NA
Gene position: 682000-680972 (Counterclockwise)
Preceding gene: 170762396
Following gene: 170761925
Centisome position: 90.73
GC content: 27.02
Gene sequence:
>1029_bases GTGACAAATATAATGAGTGTATTACATACAACTAATACTTCACAAGGTAATGGAATTAATTCATGACAATCAATTTTAAT TTTTTTAGCATTTTTGATTGTTTTTATTATCTTTACAGTTATTAAAAAAATCTATTATTCAATTCGTTTTCAAAAGCGTT TTTATATTATTCCTAAAACTTCGGTTAAAGGGATTTCAAATATTGCTATGGTGATTTCGATTTCTGTTGCAGTGATTATA TTATTAACAGTTTTATCAGCTAACACAGCTTCTGTAATTTTTCGTGCTTGACCAGGTACACGTGTTACTTTAGAAGGGAT TCTTATTAAAATTGGAGGTTTATTATTTGGTCCAATTTTAGGTATTTTTATTGGTGCAATGACTGATTTATTATCTGTGG CTATGACTGCTGGTGTATTTCATTATGGTTATTTAATTGCTGCTATGGCTTATGGATTAATTGGAGGACTAATTCGAATT ATTCTAACTACTTCCAAAAAAAAGGATTTACCATTTGCAATTTATAGTTCAATGGCAACTATTTTAATTGGTGTAGGAAT TGCCTTATTTTTATATTTTGCTCCAGGAATTGGTGATAAGGGTTTTAATATTCAATTATTTGGTTTTGATATTAAAATTG CACGAACATTGATGATTGGCATTATTTTAGGTTTTTTCTTATTATCAATTATCGTTGTTTGGTTTAGTTTATTGATAAAA TATTGATTCAATAAAAAAAATAAAGCTAAAACCAAAACAAATTGATTCATTATATTTGCCCCTGTTTTAGTAACAATTTT ACTAACTGAAGCAGTGGTTAATGTACTAATGATGCCATCGTTTGATGCTGAATTATCAAGTCTAAAATATACACAATGAT TATCAATTCGTGCTGTTTTATTTATTCCAATGGTGGTTTTAAACTTATTGATTATTTATCCAATTTTTAAAATTGTTGTT CCTTTAATTCGTTATGATTATGAAGATGATATTGTTGAGGATAAACATATTCCAATTCATGTTGACTAA
Upstream 100 bases:
>100_bases TTTTAACTTGTAAACATTTTAGTAAATGCAATGATTATTTAATTAAACATTTACGCACTCCAATAAAATGATAAAATTTA TTAATTAGTGAGGTGAATCT
Downstream 100 bases:
>100_bases TAAAGAAAAGAGAAATTAAGATGAGTTATAATTTACAAAAATTAATGTCATCATGCATGTTTATATTAACTGATGATGAA ATTAAACAGGTTGAAAATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MTNIMSVLHTTNTSQGNGINSWQSILIFLAFLIVFIIFTVIKKIYYSIRFQKRFYIIPKTSVKGISNIAMVISISVAVII LLTVLSANTASVIFRAWPGTRVTLEGILIKIGGLLFGPILGIFIGAMTDLLSVAMTAGVFHYGYLIAAMAYGLIGGLIRI ILTTSKKKDLPFAIYSSMATILIGVGIALFLYFAPGIGDKGFNIQLFGFDIKIARTLMIGIILGFFLLSIIVVWFSLLIK YWFNKKNKAKTKTNWFIIFAPVLVTILLTEAVVNVLMMPSFDAELSSLKYTQWLSIRAVLFIPMVVLNLLIIYPIFKIVV PLIRYDYEDDIVEDKHIPIHVD
Sequences:
>Translated_342_residues MTNIMSVLHTTNTSQGNGINS*QSILIFLAFLIVFIIFTVIKKIYYSIRFQKRFYIIPKTSVKGISNIAMVISISVAVII LLTVLSANTASVIFRA*PGTRVTLEGILIKIGGLLFGPILGIFIGAMTDLLSVAMTAGVFHYGYLIAAMAYGLIGGLIRI ILTTSKKKDLPFAIYSSMATILIGVGIALFLYFAPGIGDKGFNIQLFGFDIKIARTLMIGIILGFFLLSIIVVWFSLLIK Y*FNKKNKAKTKTN*FIIFAPVLVTILLTEAVVNVLMMPSFDAELSSLKYTQ*LSIRAVLFIPMVVLNLLIIYPIFKIVV PLIRYDYEDDIVEDKHIPIHVD >Mature_341_residues TNIMSVLHTTNTSQGNGINS*QSILIFLAFLIVFIIFTVIKKIYYSIRFQKRFYIIPKTSVKGISNIAMVISISVAVIIL LTVLSANTASVIFRA*PGTRVTLEGILIKIGGLLFGPILGIFIGAMTDLLSVAMTAGVFHYGYLIAAMAYGLIGGLIRII LTTSKKKDLPFAIYSSMATILIGVGIALFLYFAPGIGDKGFNIQLFGFDIKIARTLMIGIILGFFLLSIIVVWFSLLIKY *FNKKNKAKTKTN*FIIFAPVLVTILLTEAVVNVLMMPSFDAELSSLKYTQ*LSIRAVLFIPMVVLNLLIIYPIFKIVVP LIRYDYEDDIVEDKHIPIHVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the gatC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003837 [H]
Pfam domain/function: PF02686 Glu-tRNAGln [H]
EC number: NA
Molecular weight: Translated: 37189; Mature: 37058
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNIMSVLHTTNTSQGNGINSQSILIFLAFLIVFIIFTVIKKIYYSIRFQKRFYIIPKTS CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCC VKGISNIAMVISISVAVIILLTVLSANTASVIFRAPGTRVTLEGILIKIGGLLFGPILGI CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHH FIGAMTDLLSVAMTAGVFHYGYLIAAMAYGLIGGLIRIILTTSKKKDLPFAIYSSMATIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH IGVGIALFLYFAPGIGDKGFNIQLFGFDIKIARTLMIGIILGFFLLSIIVVWFSLLIKYF HHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NKKNKAKTKTNFIIFAPVLVTILLTEAVVNVLMMPSFDAELSSLKYTQLSIRAVLFIPMV CCCCCCCHHCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH VLNLLIIYPIFKIVVPLIRYDYEDDIVEDKHIPIHVD HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEC >Mature Secondary Structure TNIMSVLHTTNTSQGNGINSQSILIFLAFLIVFIIFTVIKKIYYSIRFQKRFYIIPKTS CHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCC VKGISNIAMVISISVAVIILLTVLSANTASVIFRAPGTRVTLEGILIKIGGLLFGPILGI CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHH FIGAMTDLLSVAMTAGVFHYGYLIAAMAYGLIGGLIRIILTTSKKKDLPFAIYSSMATIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH IGVGIALFLYFAPGIGDKGFNIQLFGFDIKIARTLMIGIILGFFLLSIIVVWFSLLIKYF HHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NKKNKAKTKTNFIIFAPVLVTILLTEAVVNVLMMPSFDAELSSLKYTQLSIRAVLFIPMV CCCCCCCHHCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH VLNLLIIYPIFKIVVPLIRYDYEDDIVEDKHIPIHVD HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7569993; 8253680 [H]