| Definition | Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome. |
|---|---|
| Accession | NC_010503 |
| Length | 751,679 |
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The map label for this gene is 170762271
Identifier: 170762271
GI number: 170762271
Start: 406405
End: 407508
Strand: Direct
Name: 170762271
Synonym: UPA3_0374
Alternate gene names: NA
Gene position: 406405-407508 (Clockwise)
Preceding gene: 170761911
Following gene: 170762335
Centisome position: 54.07
GC content: 25.27
Gene sequence:
>1104_bases ATGAAAAATCCATCACGATTTATATTTATAATAAAAAATAATATTTTAAATACCATTAACAATGCATCATTTATTGAAAA TGGAAATTTCAAGAAAAAATTTCGGGTTTATGCACGCAAGCAACATTTAGCAGCTTGAGTTATTAGTATTGTTACAATTC TTTTTTTATCGTTATTAGTTATGTTTATTAAAATTAATAACCAAGGTCAATTATTAAATAATCGGACTCCTTTAGATTTG TTTAAAGTAAATTATGAAACAATCTTACAAATTTGAATTACAGGAGCATCATTAGGAGCATCAGCTTATATGTTCCAACG GATTACTAAAAATCGATTAGTTGATACATCAACTCTTGGGATAGGTAATGTTTGTTTGATTGGGTTATTTTTTTTAGCAA TATCAATTAATTTTGAAAATTATGGTTCTCAAAAACTTTTTGAAAATTTATTACCTTTTATTTTTATAATATCAGGAGTA TGTGCCGGATTAATTTTGTATTGATTTTCAAAAAAACGAACCGGTTTTAGCCATACAAAGTTAATTGTCTCTGGTGTATT CATTAATTTTATTGCTATTGCTTTATCAATTAGCTTAAAAGACAATTTAACTCTAGTTGCATCAAATTATATTGACGATC GTTTGTTAGGTAATTTTTCAAACCGTAATAGTACTGAAAAATATTTAAGTTATGCTGTTTTTTTATTTTTAATGATATGA TGCTTTTTGCGTTCTGCTAAATTTAAAGTTGTTATTACAGATACAATGATTGCTGAACAATTAGGATTAAAAGTAAAATT ATTGAATTTAGAAATGATTTTTATCTCATCTTGTTTAACAGCTGTTTCATATATTATGGGAGGAAATGTATTATTTTTAG GAATTGCTGCAGCAAATTTAGGGTATGCGGTTTTTGGTAATCGCTTTAGTTCATCAATAATTTTTTCAAGCTTCATCACC ATTATCTTTTTAATTTTTGGTCAATTTATTTTAGATAATATCGTTCAAAATTTAACTAGTTTGGTATTTGACGCCCCTAT TGTAACTCCTTTATTAGTAGCTCCAATATTTACATTTATTATCTTATTTAAAAATAATATTTAA
Upstream 100 bases:
>100_bases TATTTTTATCACTAAATTATCGTTTTGGTCCTAACTTTTTAATGGCTATTGTTAGTGCATTTGTGTTAATTTTTATTATG CGAAAACACGGATAAATAAT
Downstream 100 bases:
>100_bases GCACAATCTTAGTAGTGAACAAGCCATATTGTTCACTATTTTTTTTTTTTTTTGGGTGGTAAATGGAAAAAAATATATTT ATTTTTGTGTATTAAAATTA
Product: ferrichrome ABC transporter
Products: NA
Alternate protein names: Hemin Permease; Ferric Anguibactin Transport System Permerase Protein; Hemin Transport System Permease
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MKNPSRFIFIIKNNILNTINNASFIENGNFKKKFRVYARKQHLAAWVISIVTILFLSLLVMFIKINNQGQLLNNRTPLDL FKVNYETILQIWITGASLGASAYMFQRITKNRLVDTSTLGIGNVCLIGLFFLAISINFENYGSQKLFENLLPFIFIISGV CAGLILYWFSKKRTGFSHTKLIVSGVFINFIAIALSISLKDNLTLVASNYIDDRLLGNFSNRNSTEKYLSYAVFLFLMIW CFLRSAKFKVVITDTMIAEQLGLKVKLLNLEMIFISSCLTAVSYIMGGNVLFLGIAAANLGYAVFGNRFSSSIIFSSFIT IIFLIFGQFILDNIVQNLTSLVFDAPIVTPLLVAPIFTFIILFKNNI
Sequences:
>Translated_367_residues MKNPSRFIFIIKNNILNTINNASFIENGNFKKKFRVYARKQHLAA*VISIVTILFLSLLVMFIKINNQGQLLNNRTPLDL FKVNYETILQI*ITGASLGASAYMFQRITKNRLVDTSTLGIGNVCLIGLFFLAISINFENYGSQKLFENLLPFIFIISGV CAGLILY*FSKKRTGFSHTKLIVSGVFINFIAIALSISLKDNLTLVASNYIDDRLLGNFSNRNSTEKYLSYAVFLFLMI* CFLRSAKFKVVITDTMIAEQLGLKVKLLNLEMIFISSCLTAVSYIMGGNVLFLGIAAANLGYAVFGNRFSSSIIFSSFIT IIFLIFGQFILDNIVQNLTSLVFDAPIVTPLLVAPIFTFIILFKNNI >Mature_367_residues MKNPSRFIFIIKNNILNTINNASFIENGNFKKKFRVYARKQHLAA*VISIVTILFLSLLVMFIKINNQGQLLNNRTPLDL FKVNYETILQI*ITGASLGASAYMFQRITKNRLVDTSTLGIGNVCLIGLFFLAISINFENYGSQKLFENLLPFIFIISGV CAGLILY*FSKKRTGFSHTKLIVSGVFINFIAIALSISLKDNLTLVASNYIDDRLLGNFSNRNSTEKYLSYAVFLFLMI* CFLRSAKFKVVITDTMIAEQLGLKVKLLNLEMIFISSCLTAVSYIMGGNVLFLGIAAANLGYAVFGNRFSSSIIFSSFIT IIFLIFGQFILDNIVQNLTSLVFDAPIVTPLLVAPIFTFIILFKNNI
Specific function: Unknown
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40544; Mature: 40544
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNPSRFIFIIKNNILNTINNASFIENGNFKKKFRVYARKQHLAAVISIVTILFLSLLVM CCCCCEEEEEEECCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIKINNQGQLLNNRTPLDLFKVNYETILQIITGASLGASAYMFQRITKNRLVDTSTLGIG HHHCCCCCCCCCCCCCCHHEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCH NVCLIGLFFLAISINFENYGSQKLFENLLPFIFIISGVCAGLILYFSKKRTGFSHTKLIV HHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH SGVFINFIAIALSISLKDNLTLVASNYIDDRLLGNFSNRNSTEKYLSYAVFLFLMICFLR HHHHHHHHHHHHHEEECCCEEEEECCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC SAKFKVVITDTMIAEQLGLKVKLLNLEMIFISSCLTAVSYIMGGNVLFLGIAAANLGYAV CCCEEEEEEHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHCCHHH FGNRFSSSIIFSSFITIIFLIFGQFILDNIVQNLTSLVFDAPIVTPLLVAPIFTFIILFK HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC NNI CCC >Mature Secondary Structure MKNPSRFIFIIKNNILNTINNASFIENGNFKKKFRVYARKQHLAAVISIVTILFLSLLVM CCCCCEEEEEEECCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIKINNQGQLLNNRTPLDLFKVNYETILQIITGASLGASAYMFQRITKNRLVDTSTLGIG HHHCCCCCCCCCCCCCCHHEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCH NVCLIGLFFLAISINFENYGSQKLFENLLPFIFIISGVCAGLILYFSKKRTGFSHTKLIV HHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH SGVFINFIAIALSISLKDNLTLVASNYIDDRLLGNFSNRNSTEKYLSYAVFLFLMICFLR HHHHHHHHHHHHHEEECCCEEEEECCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC SAKFKVVITDTMIAEQLGLKVKLLNLEMIFISSCLTAVSYIMGGNVLFLGIAAANLGYAV CCCEEEEEEHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHCCHHH FGNRFSSSIIFSSFITIIFLIFGQFILDNIVQNLTSLVFDAPIVTPLLVAPIFTFIILFK HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC NNI CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA