| Definition | Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome. |
|---|---|
| Accession | NC_010503 |
| Length | 751,679 |
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The map label for this gene is 170762243
Identifier: 170762243
GI number: 170762243
Start: 379497
End: 381506
Strand: Direct
Name: 170762243
Synonym: UPA3_0351
Alternate gene names: NA
Gene position: 379497-381506 (Clockwise)
Preceding gene: 170761993
Following gene: 170762157
Centisome position: 50.49
GC content: 24.08
Gene sequence:
>2010_bases ATGGAAAAATTAAAAAACAACAAGACTTTGTTTTTGAATGTAGAACAAGCTCAAAAACTAGGGATTAATAACCCTTTAAC ACAAGAGATTTTTTTAGATGATCAAAAGTTAAAAGTTCATTTAATTAATAGTATAAAAGATGAGTTTTACTTAAAAAAAA GTATTAGTAAAGGTTATGCTTATTTTAATAGTTTAGAACAATTTAAGACTATGGAGCTTGATGTTTTAGATAACTATCAA TTTGCAAAAATAGCAGCTACTAATTTAGATGAGTATGATCAATTAGTTTACACAAAAACTCGTCAATATTTAATTAATAA AGAATTTTGAACTAATGATGGTTTAGATGCATTTATTGGTGATGATTTTAAAAGAAAACAATTAACGAGCAAAGAAATCG TTAATCTAAAAACAAAATATGATTTATGAATACAAGAATTACATTTTAATAATGCACGAATTAGTAAACAAATTCATAAT TTAAGTATTCATGGTCAAAATAAATTAGATTATGAGAAATTTTATGATAAAAAAGCAACCCTTGAATCAAATTTAGATAT TCTTCAAATTTTAATTTATTTAAGATCTTCATTACTTGAGTTAGATTTTGACGATCTTTTTAAAGATGATCAAAATAAAA TAAGTATTCGTCAATTATTAGTTAATGATTTAGAATACTTGCCGTTTTCATTTCAACGTTATGATTATGAATCAAGACGT AATTTCATTAGAAACTCACGTCAATTAGTTGATACCTCAATTGATTTTGACGATCTTGAATATGATTTTTTGCACAATAA GAAACCAAAACAAGAACTAGAAAAAAATAATGAATCAATTAAAATAGCTGAATTAAAAAAATTTGAAAATTCACAATTAA GTGATGAACAACAATCTAATTTAGAAAAAGAGTTCTATAGTATTGGAAGAATTAACTGTTTTGACGAAGTTAGCGAAAAT AAACAAGAATTAAACAAAGAACAATTAGTAATCGATAAAAAAAATGGGTATTTGAAGCCACGTAGTTACTTACGTCATCA TGAAACTCCATTTATGGTTGACATTGAGAACCGGGTAGACTTTTTAATGGCAGGATATGAAATTATTAAAAATGATGATC CATATGCAATTAAACAAGAAATATTAAAAAATACCATTTTAGAACAACAAAAGCTTGTCGAACAAGATGATCATGATTTT AAAGTTAAAAATGATGATCAAGAAGCAAATGAAGAATTATTGGACAATACTGATAAATTAGAAAATCAAGATTCTACAAG TGCTGTTGAATTTAATGATTCATCTGAAGTTACTCAAGTAGTAAAAACGGATGAAAATGTTGATAATTTAATTAAAACTA AGCAAATAACTAGTTTTAACGATCTTAAACAAGAGCAATCATCTCAAGAAAATATTATTAAAAATGATCTTTCATCAATT CAAATTCGTTTAGATGAAATTATTAATGTACATGAAAAAGATACTAAATTACAAACCGAACTAAATTCAATTATGATAGA TAGTAATGAAAAAAATATTGATGATAGTTTAAATAATTTAAATGAACAAATACGAATTCAAGATCAAGAATTAGAATCAT CAGATAATCAAAATGTAATTATTGAAGAAGAAATTAATACCAAAAATTTAAATAATAAAGCTGATGTTGGTGTTATGAGT GTTGAAAAAAAATATGAACCTGAAGAGGAAATGGTTAATTTTGAATTTGAAATACCTGAAAACCAAAAAGAATCAGTTAA CCAAGATGTTTTAAATAGTAATAGTATTGATAATTTTAAAGAAGAAAAAGCTAAAGAAAATACTTTCTTAACACCAAAAG AAATAGAAAATAATGATTTATCATCACAAATTGAATTAACACCTGCTGATTTTGAACTTAAGACACAAGAAATTAATGAC GAAACTGAACGTTTATTGGATGAATTAAATAATAATAAACCTAAAGAAAAGAAGAAATTTTGGACATGATTTAACTCAAA AAAAAGATAA
Upstream 100 bases:
>100_bases TTATTTTTTTATTTTTTTTAGATATAATTTAATTTAGACGTATGCTATTAATGTATAATTTTAAATAATGTTTTATATTA ATTTAAGGGTGAAAACAATG
Downstream 100 bases:
>100_bases ATAAAAAAAAGGAATTATTAATTATGAATAAAACTAATCAAATTGTGGATTTATTAACCAATAAACAAAATAATTCAATT CAAAGACGCGATAATCTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 669; Mature: 669
Protein sequence:
>669_residues MEKLKNNKTLFLNVEQAQKLGINNPLTQEIFLDDQKLKVHLINSIKDEFYLKKSISKGYAYFNSLEQFKTMELDVLDNYQ FAKIAATNLDEYDQLVYTKTRQYLINKEFWTNDGLDAFIGDDFKRKQLTSKEIVNLKTKYDLWIQELHFNNARISKQIHN LSIHGQNKLDYEKFYDKKATLESNLDILQILIYLRSSLLELDFDDLFKDDQNKISIRQLLVNDLEYLPFSFQRYDYESRR NFIRNSRQLVDTSIDFDDLEYDFLHNKKPKQELEKNNESIKIAELKKFENSQLSDEQQSNLEKEFYSIGRINCFDEVSEN KQELNKEQLVIDKKNGYLKPRSYLRHHETPFMVDIENRVDFLMAGYEIIKNDDPYAIKQEILKNTILEQQKLVEQDDHDF KVKNDDQEANEELLDNTDKLENQDSTSAVEFNDSSEVTQVVKTDENVDNLIKTKQITSFNDLKQEQSSQENIIKNDLSSI QIRLDEIINVHEKDTKLQTELNSIMIDSNEKNIDDSLNNLNEQIRIQDQELESSDNQNVIIEEEINTKNLNNKADVGVMS VEKKYEPEEEMVNFEFEIPENQKESVNQDVLNSNSIDNFKEEKAKENTFLTPKEIENNDLSSQIELTPADFELKTQEIND ETERLLDELNNNKPKEKKKFWTWFNSKKR
Sequences:
>Translated_669_residues MEKLKNNKTLFLNVEQAQKLGINNPLTQEIFLDDQKLKVHLINSIKDEFYLKKSISKGYAYFNSLEQFKTMELDVLDNYQ FAKIAATNLDEYDQLVYTKTRQYLINKEF*TNDGLDAFIGDDFKRKQLTSKEIVNLKTKYDL*IQELHFNNARISKQIHN LSIHGQNKLDYEKFYDKKATLESNLDILQILIYLRSSLLELDFDDLFKDDQNKISIRQLLVNDLEYLPFSFQRYDYESRR NFIRNSRQLVDTSIDFDDLEYDFLHNKKPKQELEKNNESIKIAELKKFENSQLSDEQQSNLEKEFYSIGRINCFDEVSEN KQELNKEQLVIDKKNGYLKPRSYLRHHETPFMVDIENRVDFLMAGYEIIKNDDPYAIKQEILKNTILEQQKLVEQDDHDF KVKNDDQEANEELLDNTDKLENQDSTSAVEFNDSSEVTQVVKTDENVDNLIKTKQITSFNDLKQEQSSQENIIKNDLSSI QIRLDEIINVHEKDTKLQTELNSIMIDSNEKNIDDSLNNLNEQIRIQDQELESSDNQNVIIEEEINTKNLNNKADVGVMS VEKKYEPEEEMVNFEFEIPENQKESVNQDVLNSNSIDNFKEEKAKENTFLTPKEIENNDLSSQIELTPADFELKTQEIND ETERLLDELNNNKPKEKKKFWT*FNSKKR >Mature_669_residues MEKLKNNKTLFLNVEQAQKLGINNPLTQEIFLDDQKLKVHLINSIKDEFYLKKSISKGYAYFNSLEQFKTMELDVLDNYQ FAKIAATNLDEYDQLVYTKTRQYLINKEF*TNDGLDAFIGDDFKRKQLTSKEIVNLKTKYDL*IQELHFNNARISKQIHN LSIHGQNKLDYEKFYDKKATLESNLDILQILIYLRSSLLELDFDDLFKDDQNKISIRQLLVNDLEYLPFSFQRYDYESRR NFIRNSRQLVDTSIDFDDLEYDFLHNKKPKQELEKNNESIKIAELKKFENSQLSDEQQSNLEKEFYSIGRINCFDEVSEN KQELNKEQLVIDKKNGYLKPRSYLRHHETPFMVDIENRVDFLMAGYEIIKNDDPYAIKQEILKNTILEQQKLVEQDDHDF KVKNDDQEANEELLDNTDKLENQDSTSAVEFNDSSEVTQVVKTDENVDNLIKTKQITSFNDLKQEQSSQENIIKNDLSSI QIRLDEIINVHEKDTKLQTELNSIMIDSNEKNIDDSLNNLNEQIRIQDQELESSDNQNVIIEEEINTKNLNNKADVGVMS VEKKYEPEEEMVNFEFEIPENQKESVNQDVLNSNSIDNFKEEKAKENTFLTPKEIENNDLSSQIELTPADFELKTQEIND ETERLLDELNNNKPKEKKKFWT*FNSKKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78592; Mature: 78592
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKLKNNKTLFLNVEQAQKLGINNPLTQEIFLDDQKLKVHLINSIKDEFYLKKSISKGYA CCCCCCCCEEEEEHHHHHHCCCCCCCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHH YFNSLEQFKTMELDVLDNYQFAKIAATNLDEYDQLVYTKTRQYLINKEFTNDGLDAFIGD HHHHHHHHHHEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCC DFKRKQLTSKEIVNLKTKYDLIQELHFNNARISKQIHNLSIHGQNKLDYEKFYDKKATLE CHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEECCCCCCCHHHHHCHHHHHH SNLDILQILIYLRSSLLELDFDDLFKDDQNKISIRQLLVNDLEYLPFSFQRYDYESRRNF CCHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHCCHHHHHHH IRNSRQLVDTSIDFDDLEYDFLHNKKPKQELEKNNESIKIAELKKFENSQLSDEQQSNLE HHCCHHHHHCCCCCCCCCHHHHCCCCCHHHHHCCCCCEEEHHHHHHCCCCCCCHHHHHHH KEFYSIGRINCFDEVSENKQELNKEQLVIDKKNGYLKPRSYLRHHETPFMVDIENRVDFL HHHHHCCCCCHHHHHHHHHHHCCHHHEEEECCCCCCCCHHHHHHCCCCEEEEECHHHHHH MAGYEIIKNDDPYAIKQEILKNTILEQQKLVEQDDHDFKVKNDDQEANEELLDNTDKLEN HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHCCHHHHCC QDSTSAVEFNDSSEVTQVVKTDENVDNLIKTKQITSFNDLKQEQSSQENIIKNDLSSIQI CCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH RLDEIINVHEKDTKLQTELNSIMIDSNEKNIDDSLNNLNEQIRIQDQELESSDNQNVIIE HHHHHHCCCCCHHHHHHHHHHEEECCCCCCHHHHHHCCCHHEEEEHHHHCCCCCCCEEEE EEINTKNLNNKADVGVMSVEKKYEPEEEMVNFEFEIPENQKESVNQDVLNSNSIDNFKEE ECCCCCCCCCCCCCCEEEHHHCCCCHHHHEEEEEECCCCHHHHHHHHHHCCCCCCHHHHH KAKENTFLTPKEIENNDLSSQIELTPADFELKTQEINDETERLLDELNNNKPKEKKKFWT HHCCCCCCCCHHCCCCCCCCEEEECCCCCEEEHHHCCCHHHHHHHHHCCCCCCHHHHEEC FNSKKR CCCCCC >Mature Secondary Structure MEKLKNNKTLFLNVEQAQKLGINNPLTQEIFLDDQKLKVHLINSIKDEFYLKKSISKGYA CCCCCCCCEEEEEHHHHHHCCCCCCCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHH YFNSLEQFKTMELDVLDNYQFAKIAATNLDEYDQLVYTKTRQYLINKEFTNDGLDAFIGD HHHHHHHHHHEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCC DFKRKQLTSKEIVNLKTKYDLIQELHFNNARISKQIHNLSIHGQNKLDYEKFYDKKATLE CHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEECCCCCCCHHHHHCHHHHHH SNLDILQILIYLRSSLLELDFDDLFKDDQNKISIRQLLVNDLEYLPFSFQRYDYESRRNF CCHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHCCHHHHHHH IRNSRQLVDTSIDFDDLEYDFLHNKKPKQELEKNNESIKIAELKKFENSQLSDEQQSNLE HHCCHHHHHCCCCCCCCCHHHHCCCCCHHHHHCCCCCEEEHHHHHHCCCCCCCHHHHHHH KEFYSIGRINCFDEVSENKQELNKEQLVIDKKNGYLKPRSYLRHHETPFMVDIENRVDFL HHHHHCCCCCHHHHHHHHHHHCCHHHEEEECCCCCCCCHHHHHHCCCCEEEEECHHHHHH MAGYEIIKNDDPYAIKQEILKNTILEQQKLVEQDDHDFKVKNDDQEANEELLDNTDKLEN HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHCCHHHHCC QDSTSAVEFNDSSEVTQVVKTDENVDNLIKTKQITSFNDLKQEQSSQENIIKNDLSSIQI CCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH RLDEIINVHEKDTKLQTELNSIMIDSNEKNIDDSLNNLNEQIRIQDQELESSDNQNVIIE HHHHHHCCCCCHHHHHHHHHHEEECCCCCCHHHHHHCCCHHEEEEHHHHCCCCCCCEEEE EEINTKNLNNKADVGVMSVEKKYEPEEEMVNFEFEIPENQKESVNQDVLNSNSIDNFKEE ECCCCCCCCCCCCCCEEEHHHCCCCHHHHEEEEEECCCCHHHHHHHHHHCCCCCCHHHHH KAKENTFLTPKEIENNDLSSQIELTPADFELKTQEINDETERLLDELNNNKPKEKKKFWT HHCCCCCCCCHHCCCCCCCCEEEECCCCCEEEHHHCCCHHHHHHHHHCCCCCCHHHHEEC FNSKKR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA