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The map label for this gene is nusB

Identifier: 170761973

GI number: 170761973

Start: 341633

End: 342016

Strand: Direct

Name: nusB

Synonym: UPA3_0308

Alternate gene names: NA

Gene position: 341633-342016 (Clockwise)

Preceding gene: 170762058

Following gene: 170761930

Centisome position: 45.45

GC content: 22.92

Gene sequence:

>384_bases
ATGAAAACTCAATGAGCTAAACGTGTTAAATTATTTCAATTTATCTATCATTGATTAATTACAAAAAAAAATAAACCGAT
AGCATTAAAATGTGCTTTAGTTGACTTTGATTTAGATCTTAATTGAATAAATGTTGGTGAATATATTTTGGATAATTATG
AACAATTAACAAAAATGATTAAACCTCTTATTAGTAAAGATTGAACATTTGAACGTTTATCATATGTTGAGCAAGCTTTA
TTGCTAAGCGCATATGGTGAATATCTGGTTTTAAAAACTCCTAAGAAAATTATTATTGATCAAACTTTAATTACAACACA
TAATTATTCTAACAACGAATCATATAAGTTTATTAATGCAATTTTAGATCAATTATTAAATTAA

Upstream 100 bases:

>100_bases
TTGATGAAGTAAGAGATGTACAAAATCATTTAGCTTCTTTTATTTATTCAAATTTAGGCGTTGATACTAAAAGTGTAAAT
ATAGGGATTGATTTATAAAA

Downstream 100 bases:

>100_bases
AAATTATGCAACGTTACTTTGTTTCTAAAATTAAAGACAAAAAAGTTTATTTTTATGATTCTGATGTTCATCATATCAAG
AATGTTATGCGTATGAGATT

Product: transcription antitermination factor NusB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MKTQWAKRVKLFQFIYHWLITKKNKPIALKCALVDFDLDLNWINVGEYILDNYEQLTKMIKPLISKDWTFERLSYVEQAL
LLSAYGEYLVLKTPKKIIIDQTLITTHNYSNNESYKFINAILDQLLN

Sequences:

>Translated_127_residues
MKTQ*AKRVKLFQFIYH*LITKKNKPIALKCALVDFDLDLN*INVGEYILDNYEQLTKMIKPLISKD*TFERLSYVEQAL
LLSAYGEYLVLKTPKKIIIDQTLITTHNYSNNESYKFINAILDQLLN
>Mature_127_residues
MKTQ*AKRVKLFQFIYH*LITKKNKPIALKCALVDFDLDLN*INVGEYILDNYEQLTKMIKPLISKD*TFERLSYVEQAL
LLSAYGEYLVLKTPKKIIIDQTLITTHNYSNNESYKFINAILDQLLN

Specific function: Unknown

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14303; Mature: 14303

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTQAKRVKLFQFIYHLITKKNKPIALKCALVDFDLDLNINVGEYILDNYEQLTKMIKPL
CCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECEEECCCHHHHHHHCHHHHHHHHHHH
ISKDTFERLSYVEQALLLSAYGEYLVLKTPKKIIIDQTLITTHNYSNNESYKFINAILDQ
HCHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHEEECCCCCCCHHHHHHHHHHH
LLN
HCC
>Mature Secondary Structure
MKTQAKRVKLFQFIYHLITKKNKPIALKCALVDFDLDLNINVGEYILDNYEQLTKMIKPL
CCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECEEECCCHHHHHHHCHHHHHHHHHHH
ISKDTFERLSYVEQALLLSAYGEYLVLKTPKKIIIDQTLITTHNYSNNESYKFINAILDQ
HCHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHEEECCCCCCCHHHHHHHHHHH
LLN
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA