| Definition | Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome. |
|---|---|
| Accession | NC_010503 |
| Length | 751,679 |
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The map label for this gene is 170761879
Identifier: 170761879
GI number: 170761879
Start: 324700
End: 325536
Strand: Direct
Name: 170761879
Synonym: UPA3_0297
Alternate gene names: NA
Gene position: 324700-325536 (Clockwise)
Preceding gene: 170761954
Following gene: 170762212
Centisome position: 43.2
GC content: 20.79
Gene sequence:
>837_bases ATGATTAATAAAAAGATAAAGATTAACCCAAATATAACATATTTTAAACAAAAAATTTCTAATTATCATGAGCATTTGTT AGTTTGAAATGATTTATATGATAAATTAATTTCATTGACTAATAATATTATTGTTGATAAAAATAACAAAAATATTTATC ATCAAAACGACAAACAAATTTTTGATTTTACTTTATGTTTATCTGGTCTTTTGTCTAAAACTTTAGGTTTAAATCATAAA TCATCTTCGCTTTATTTAACAAATGATGATGAAGTAGCGCATCGTTTTAAGATTAAAGTTTTGCATAATTATTTTAATTT ATATAATATTGAAGAATTTTTTACGTTTATGGATAATCAAATTCCTTTAGAAAATGCAAAAAATATTGCACGTTTAAGTT TAATTTATGATTTAAAACAACATGAAAATATTTTAAAAACTATATCGAATGAAGGTTTAGAAAATATTGATTTAGAATTT GCTTTCATTAATTTTTTAAGAGCAAAAATCTCTATTAATTTTGCCTATAGTTATGATATTTCTGAAGTAATTTTATTGTT GCGAACAGGGCTAGATTTACATTTTTTAGAAAATGAGCATTTTAGTAATCTTATACCAGTTTTTGGATTAGAAACAATTA AATATTTCAAGAATTGAAAAGAATTTTTAATTAACTATGTTATGACCGTTGCATATCATAATTTAGATATTAATGACCCT AAAAATGTTCTTTTAGCAACGCAAAAATTCTTTAATCATATTAATGAAATAATTATTGATTATGGTTTAGATAAACGTGA TCAATGAATTAAAAAAATTATTCCTTTTGAAGAATAA
Upstream 100 bases:
>100_bases GTTGCATTTCCTAAGAATAACAACGGCGTTGATATGATGTTAGACGCACCATCTAACATGAATGATGAAGATTTAAAAGA ATTAGGTTTAAAAATAAAAA
Downstream 100 bases:
>100_bases TTATAGTAAAATAAGAAAGTCAATAGAGAGAGATAAATTTATGATTAAGAGTATTTGAATTGCTGGAGGTTGTTTTTGAG GTATTCAAAAATATTTTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MINKKIKINPNITYFKQKISNYHEHLLVWNDLYDKLISLTNNIIVDKNNKNIYHQNDKQIFDFTLCLSGLLSKTLGLNHK SSSLYLTNDDEVAHRFKIKVLHNYFNLYNIEEFFTFMDNQIPLENAKNIARLSLIYDLKQHENILKTISNEGLENIDLEF AFINFLRAKISINFAYSYDISEVILLLRTGLDLHFLENEHFSNLIPVFGLETIKYFKNWKEFLINYVMTVAYHNLDINDP KNVLLATQKFFNHINEIIIDYGLDKRDQWIKKIIPFEE
Sequences:
>Translated_278_residues MINKKIKINPNITYFKQKISNYHEHLLV*NDLYDKLISLTNNIIVDKNNKNIYHQNDKQIFDFTLCLSGLLSKTLGLNHK SSSLYLTNDDEVAHRFKIKVLHNYFNLYNIEEFFTFMDNQIPLENAKNIARLSLIYDLKQHENILKTISNEGLENIDLEF AFINFLRAKISINFAYSYDISEVILLLRTGLDLHFLENEHFSNLIPVFGLETIKYFKN*KEFLINYVMTVAYHNLDINDP KNVLLATQKFFNHINEIIIDYGLDKRDQ*IKKIIPFEE >Mature_278_residues MINKKIKINPNITYFKQKISNYHEHLLV*NDLYDKLISLTNNIIVDKNNKNIYHQNDKQIFDFTLCLSGLLSKTLGLNHK SSSLYLTNDDEVAHRFKIKVLHNYFNLYNIEEFFTFMDNQIPLENAKNIARLSLIYDLKQHENILKTISNEGLENIDLEF AFINFLRAKISINFAYSYDISEVILLLRTGLDLHFLENEHFSNLIPVFGLETIKYFKN*KEFLINYVMTVAYHNLDINDP KNVLLATQKFFNHINEIIIDYGLDKRDQ*IKKIIPFEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32451; Mature: 32451
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINKKIKINPNITYFKQKISNYHEHLLVNDLYDKLISLTNNIIVDKNNKNIYHQNDKQIF CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEECCCCHHH DFTLCLSGLLSKTLGLNHKSSSLYLTNDDEVAHRFKIKVLHNYFNLYNIEEFFTFMDNQI HHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC PLENAKNIARLSLIYDLKQHENILKTISNEGLENIDLEFAFINFLRAKISINFAYSYDIS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEEEEEECCHH EVILLLRTGLDLHFLENEHFSNLIPVFGLETIKYFKNKEFLINYVMTVAYHNLDINDPKN HHHHHHHCCCCEEEECCCCHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHH VLLATQKFFNHINEIIIDYGLDKRDQIKKIIPFEE HHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCC >Mature Secondary Structure MINKKIKINPNITYFKQKISNYHEHLLVNDLYDKLISLTNNIIVDKNNKNIYHQNDKQIF CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEECCCCHHH DFTLCLSGLLSKTLGLNHKSSSLYLTNDDEVAHRFKIKVLHNYFNLYNIEEFFTFMDNQI HHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC PLENAKNIARLSLIYDLKQHENILKTISNEGLENIDLEFAFINFLRAKISINFAYSYDIS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEEEEEECCHH EVILLLRTGLDLHFLENEHFSNLIPVFGLETIKYFKNKEFLINYVMTVAYHNLDINDPKN HHHHHHHCCCCEEEECCCCHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHH VLLATQKFFNHINEIIIDYGLDKRDQIKKIIPFEE HHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA