Definition Clostridium botulinum A3 str. Loch Maree, complete genome.
Accession NC_010520
Length 3,992,906

Click here to switch to the map view.

The map label for this gene is selB

Identifier: 170761458

GI number:

Start: 3235249

End: 3237156

Strand: Reverse

Name: selB

Synonym: CLK_2359

Alternate gene names: NA

Gene position: NA

Preceding gene: 170760913

Following gene: 170760971

Centisome position: NA

GC content: NA

Gene sequence:

>1908_bases
ATGAAGAACGTAATAATAGGAACAGCTGGACATATAGATCATGGTAAAACCACTTTAATAAAAGCATTAACAGGAAGAGA
AACAGATACTCTTAGAGAAGAAAAAGATAGAGGTATATCTATTAATTTAGGTTTTACATTTTTTGATCTACCTTCAGGGA
AAAGGGCAGGGATTGTAGATGTACCAGGACATGAAAAGTTTGTTAAGAACATGCTAGCTGGAGTAAGTGGTATAGATGTA
GTTCTTATGGTTATTGCTGCAGATGAAGGCATTATGCCTCAAACTAAAGAGCATTTAGAGATACTTCAATTACTTAATGT
TAATAAAGGTATAATTGTTCTTACGAAAACTGATATGGTGGAGCCAGAGTGGTTAGACATGGTTAAAGAAGACTTAAGGG
AAGAGCTAAAAGATACTTTTTTAGAAAATGCGGATATATATCCAGTATCTTCTAAGACTAAAGAAGGAATAGATGAATTA
ATAAAAGCTATAGATAACATGACAGAACATATAGAATCAAAAGATGTACAGGGTCACTTTAGGTTACCTGTAGATAGAGT
TTTCTCTATAATAGGTTTTGGAACTGTAGTAACAGGTACAGTAATTAGTGGTTCTATAAAAGAAGGACAAACCGTTCAGA
TTTATCCTTCAAAGGTTGTTACAAAGGTTAGGGGAATTCAAGTCCATGATGAGCCAACTAAAATAGCAGAGGCAGGACAA
AGATGTGCAATAAACTTATCTAATATAAAAAAGACAGAGGTAGATAGGGGAGATATAATATCTATAGAAAATCTAATGGA
ACCATCTATGATGATAGATTGTAAATTATATTATTTAAAAAGTGCATCAAAGCCACTGGAAAATAGGCAAAGAGTTAGAT
TATATCATGGAACTAGTGAAATAATATGTAGAGTTGTTATATTAGACAAAGAATATCTAAATCCAGGGGAAGAAGGATAT
GTTCAATTAAGATTAGAAAAACCTATAACTTGTCAGAGAAATGATAGATATGTTATAAGATCCTATTCTCCAATGGTAAC
TATAGCAGGAGGTTCTATAATAGATCCATTGCCTAAAAAGGCAAAACGATTTAATGAAAAATATATAGAAGAATTAAAAC
TAAAAGAAAGTGGAGATACTTCTAATATAATAGAAAAAATTATAGAAAAATTAAGTTCTAAATTCCCAAATGAGGATGAA
ATATTAAAAGCATTAGGAAAAAATGAAGAGAACATATCAGAGGAAATAGAAGAATTAATAAAGTTACAAAAGATAGTATC
TTTTAGTAATGGAGATAAAAAAGTATATACCCATATAAACTATATAGATAAAAAAGTAAAAGAAATGACATCTATATTAA
AAGAGTTTCACCAAAAAAATCCTCTTAAATGGGGAGTTTCTAAAGAAGAGTTAAGAATAAGAGTTTTAGGTAAGGATATA
AAACAAAAAACTTATGATAAACTTCTAGAGCTTTTAGAGAGCAAGGAACTAATAAAAATTCATGGAAAGTATATTTCAGA
GCATGATTTTAATGTAGAGTTTAACAAAGAACAAAAGGCTATTTATGATAGAATAATAGTTAATTATAAAAAAGGAAAAT
ACAGTCCACCTAAATATGAAGAACTTATTTCCTGGGAACAAAATGAAATAGAGTTTAAAAGAGTTTATGAAGCTGTATTA
GAAGAGGGAGCTTTGTTTAAAGTAAATGAAGACTGCATACTTTTAACATCAGATTATAATGAAGCAAAAGAAAAGGTAAA
GAAATATATGGAGGATAATGGAAAAATAACAGTAGCTGAGTTTAGAGATATGATGGATACTAGTAGAAAGTATTCTTTAG
CCATATTAGAACATTTTGACGGAATAAAATTTACAAAGAGAAATGGAGACGAAAGAGTCTTATATTAA

Upstream 100 bases:

>100_bases
TGAAGTAATATTAGACGTGAGAACTTTATTTGAGAGAGATTTTAATATAATAGTAGAAGAATTTAAAAAATTATTAAAAT
AATTGAGAATGGTGATGTTT

Downstream 100 bases:

>100_bases
GGAAATTACGACTTAAAAGGAAGTTATACTACCCGTGATTTAAAATAGGGATATGTGGCGAGATTGGCAGCTCACTCCAA
TAAGAGATTCTAACTTGTTT

Product: selenocysteine-specific translation elongation factor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>635_residues
MKNVIIGTAGHIDHGKTTLIKALTGRETDTLREEKDRGISINLGFTFFDLPSGKRAGIVDVPGHEKFVKNMLAGVSGIDV
VLMVIAADEGIMPQTKEHLEILQLLNVNKGIIVLTKTDMVEPEWLDMVKEDLREELKDTFLENADIYPVSSKTKEGIDEL
IKAIDNMTEHIESKDVQGHFRLPVDRVFSIIGFGTVVTGTVISGSIKEGQTVQIYPSKVVTKVRGIQVHDEPTKIAEAGQ
RCAINLSNIKKTEVDRGDIISIENLMEPSMMIDCKLYYLKSASKPLENRQRVRLYHGTSEIICRVVILDKEYLNPGEEGY
VQLRLEKPITCQRNDRYVIRSYSPMVTIAGGSIIDPLPKKAKRFNEKYIEELKLKESGDTSNIIEKIIEKLSSKFPNEDE
ILKALGKNEENISEEIEELIKLQKIVSFSNGDKKVYTHINYIDKKVKEMTSILKEFHQKNPLKWGVSKEELRIRVLGKDI
KQKTYDKLLELLESKELIKIHGKYISEHDFNVEFNKEQKAIYDRIIVNYKKGKYSPPKYEELISWEQNEIEFKRVYEAVL
EEGALFKVNEDCILLTSDYNEAKEKVKKYMEDNGKITVAEFRDMMDTSRKYSLAILEHFDGIKFTKRNGDERVLY

Sequences:
NA

Specific function: NA

COG id: COG3276

COG function: function code J; Selenocysteine-specific translation elongation factor

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA