Definition Clostridium botulinum A3 str. Loch Maree, complete genome.
Accession NC_010520
Length 3,992,906

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The map label for this gene is secD

Identifier: 170760876

GI number:

Start: 3319825

End: 3321093

Strand: Reverse

Name: secD

Synonym: CLK_2456

Alternate gene names: NA

Gene position: NA

Preceding gene: 170761673

Following gene: 170761742

Centisome position: NA

GC content: NA

Gene sequence:

>1269_bases
ATGAGTTACAATAGGCGTAAAAGTAACAAGGGAAAAAGCGTAATAATATTTACATTATTAATTGTAGTAATAGCTGTACT
TGCTTATGCAGGATCTTATGGTTTGAAAGTAGGAAATTATAGATTCAAATCATTTGGAGAGACTATTAATAAAGGCTTGG
ATCTTCAAGGCGGAGTGTCAATGCTAGAAGAAATTCAGGCAGATAAAGTAGATGAAAAAACTGTAGATAGAACTATAGAA
CTTATATCTATGAGAGTTAATAAAATGGGTGTTAGTGAAACTACAGTAACAAGGGAAGGTCAAAAAAGAATAAGGATAGA
AATACCAGGTAAATATAATGCAAAAGAAGTTATTGACAGTATAGGTAAAACAGGAGAATTAAAATTTGTAGGACCAGATA
AAAGTATTATACTTACAGGAAAAGATGTAAAAGATGCAACCGCTTATATAAATCAAGAAGATAATTCACCTACTGTTGGA
TTGGATTTAAATGAGTCAGGAACTAAAAAATTTGCAGATGCCACTAAAAAATTTATTGGTCAACCTATAGCTATATATAT
GGATGAAGAAGAGCTAACAAAACCAGTGGTTCAAGCACATATAACGAATGGAAAAGCAGTAATAACAGGAAGTAAAAGTA
TAGAAGAAGCTAAAAGACAAGCTAATATAATAAAATCAGGAGCCCTGCCTGTAGCTGTTAAGCCTGTAGAGGTTAGAACA
GTAGGGGCTACATTAGGAGCTAATGCCTTGGATCTAAGTGTAAAGGCAGGAGTTGTAGGTGTATCACTTGTATTTTTATT
TATGCTTATATACTATAGAGTACCAGGACTGTTGGCTGATATAGCTTTGGTTTTATATATAGTACTACTTTTAGCTACAT
TCTCAACTATAAAGGCTACATTAACATTATCAGGTATAGCAGGTTTCCTATTAACAATAGGTATGGCAGTAGATGCTAAT
GTGCTTATATTTGAAAGAATTAGAGAGGAACTTAAAACAGGAAAATCAATAAAATCTGCTTTAGAATCAGGATATCATAG
AGCACTTTCTTCTATTTTAGACTCTAATATAACTACAATAATAGCAGGTATAGTTTTATATAATTTAGGATCTGGAGCAG
TTAAAGGATTCGCTTTAACTCTTATGATAGGTATAATTCTAAGTATGTTTACAGCTATAGTTGTTACTAGATTATTACTA
AAACTAGGTTATGATATAGGCATTCTTAATAATTTAGCTTGCTTTAGAGTTAAAAGGGGGGAAGAATAG

Upstream 100 bases:

>100_bases
TGATTAATAAAAGAAAATTAGTACATAATTTATTATAAAGCAAACATAATAAATTATGTTCTTATTCTTATAATAAACTA
TATATAAAAGGGGGATAAGT

Downstream 100 bases:

>100_bases
TATGCTAAAGATAATAGAAAAAACAAAAATTTGGTTTTCTATTTCCTTAATAATTATACTTACAGGAATGTTTTTTCTTA
TGAAGGATGGATTAAATTAT

Product: preprotein translocase subunit SecD

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>422_residues
MSYNRRKSNKGKSVIIFTLLIVVIAVLAYAGSYGLKVGNYRFKSFGETINKGLDLQGGVSMLEEIQADKVDEKTVDRTIE
LISMRVNKMGVSETTVTREGQKRIRIEIPGKYNAKEVIDSIGKTGELKFVGPDKSIILTGKDVKDATAYINQEDNSPTVG
LDLNESGTKKFADATKKFIGQPIAIYMDEEELTKPVVQAHITNGKAVITGSKSIEEAKRQANIIKSGALPVAVKPVEVRT
VGATLGANALDLSVKAGVVGVSLVFLFMLIYYRVPGLLADIALVLYIVLLLATFSTIKATLTLSGIAGFLLTIGMAVDAN
VLIFERIREELKTGKSIKSALESGYHRALSSILDSNITTIIAGIVLYNLGSGAVKGFALTLMIGIILSMFTAIVVTRLLL
KLGYDIGILNNLACFRVKRGEE

Sequences:
NA

Specific function: NA

COG id: COG0342

COG function: function code U; Preprotein translocase subunit SecD

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA