Definition Clostridium botulinum A3 str. Loch Maree, complete genome.
Accession NC_010520
Length 3,992,906

Click here to switch to the map view.

The map label for this gene is hypF

Identifier: 170760420

GI number:

Start: 2016858

End: 2019296

Strand: Reverse

Name: hypF

Synonym: CLK_1218

Alternate gene names: NA

Gene position: NA

Preceding gene: 170759565

Following gene: 170760711

Centisome position: NA

GC content: NA

Gene sequence:

>2439_bases
ATGTATCTGACTGCTAAAGACAAATTCAATAATAAAAAGCGATATTTAATAGAAATAAAAGGTATAGTACAAGGGGTAGG
GTTTAGACCTTTTGTATATAATAGAGCAACAGAACTTAATTTAAAAGGATATGTAAAAAATAAAGGTGGTATGGTAGAAG
TAGAACTAGAAGGATATAAAGAAAATATTAAAAGCTTCATATTAGAGTTAATTAAGAGCCCTCCCATTATGGCTAAAATA
GAAGATTTAAAATGTAAATTTTTAAAACCTATCGATTATAAAGATTTTACTATTAAAAAAAGTTCTAATGAAAAAAATTC
AGTAAAATTTATAAGCCCAGATGTAGCCCTTTGCAAAAACTGTATAAAAGAATTAAATTTAAGTACTAACAAAAGATATG
AATATGCCTTTATTAATTGTACAGATTGTGGTCCTAGATACTCTATTATAAAATCATTACCTTATGATAGAGAGAATACA
ACTATGAAAAAATTTGCTATGTGTAATAGTTGCAAAGAAGAATATAATATTCCAGACAATAGACGATTTCACGCAGAACC
TAATTGTTGTAGTTTATGTGGTCCTTTATTAATATTATTGAATAATAAAAAACAAGTTATATGTACTAATAGGGAAAAAG
AATATATAAATAATACATCTAATAATAATGATTATAATGAAAATAAAATTCATGAAAATTATATAAATGTAGCTAATTTA
AGTTATGAAAAAAATCCCATTTATACTGCTGCAGAACTAATAAAAAAAGGATACATTGTAGCTGTAAAAGGAATAGGAGG
ATTTCATTTAGTTTGTAATGGTAAAGATAAAAAGGCTATAGAAAGTTTAAGAATAAGAAAAAAAAGACCTCATAAACCTT
TAGCTATAATGTGTAAGGATTTAAAAATCGTAAAAGAATTGTGCTATGTATCTAAATTAGAGGAACAGATTCTAGAGGGT
AATAAAAAACCTATTTTGATTTTAAAGAAAAAGGCTACAAATATATTGTCAGATAATATATCACCTTTCAATAAATATTT
AGGAGTTATGCTGCCCTATAGTCCGCTACATTATTTACTATTTAAAGAAGGTTTAGATATAATAATAGCTACCAGTGGTA
ATGTAAGTGGTAGACCTATGGAATACAAAAATTGTGAAGCTATAGAAAATTTGAAAACTATAGCAGATTATTTTTTAATT
CATAATAGAGATATCCATACTCCCATTGACGATTCTGTAGTAAAAGTTATAAATAACAAAGAAAGTTTAATTAGAATAGG
TCGTGGATATGCTCCTTATAATTTTAATATAAAAACTAAAAATGAATTATTAGCAAAGGGTGCAGAAGAAAAAAACACCT
CTTGCCTTTCTCACAAGGGATATGTGTACATGAGTCAATATATAGGGGATCTAAAAAATATAGATTGCTACAATAGACAT
TTAAATACCATAGAACACCTACAAACTTTATTAGATGCAAATCCTAAAATATCTATAGAAGATTTACATCCAAATTTTAA
TACTAATTATGAAAATAAAAACTATGATAGAACCATTAAAGTCCAACATCATCATGCCCATATGGTAAGTTGTATGGTAG
AACATTCGTTATTTGATAGTGTTATTGCTGTGGTATTTGATGGTACAGGCTTTGGGAAAGACAACAGTATATGGGGTGGA
GAGTTTTTAATAGGTAACAGAACCTATTTTAAAAGAGTTGGGCATTTAAAAAAGGTTAAAATCCAGGGAGGAGACAAATC
AATAAAAGAACCATGGAGATGTGCCTTAAGCTATTTGTATTCTATAAATTATGAAAAGAGCTCTATAATTAAAAATGTAG
AAGAAGAAAAAATTAAAATGATAAAGAAAGCTTTATACAATAATATAAATTGCTATACATCTTCTAGTATGGGAAGGTTT
TTTGATGCAGTAACTTCATTAATAGGCATTAGAAATATGGTAAGTTATGATGGTCAAGCTCCCATAGAGTTAGAAAATAT
CATAGATGAACCTATATCTCTTTATTATAATTATAGTATTAATAAAATAGATAATGTTTTTCAAATAGATTATAAAGATA
TAATTTTAGGAATAATTAAAGATTTAAAAGAAAATAAAGATTTATCTATTATATCATCAAAGTTTCATAATACAGTTATT
GATTTTACTTGTAACTTGGTGTGTAAAATAAAAAAAACTTATGAAATGAAATGTAAATTAGATAAGGTTGTATTAAGTGG
AGGAGTTTTTCAAAATAATTACTTATTAAAAGGTATATACAGCAGGTTAAAGGATAATGGATTTAAAGTGTTTTTTAATG
AAAAAGTTCCTATAAATGATGAAGGAATAAGCCTTGGTCAATTAGCTATTGCTGATTCTATTATAGAAAGGGAGAAAAGA
AATGTGCATTGCAATACCGGGGAAAATTATAAGTATTGA

Upstream 100 bases:

>100_bases
ACAAAATGCAATAATAATTTAGTAGATGAAAATATAGAAATTGTTGTGGGAAGACGACCTATAGATGAGCAAACAGCTAT
TATTAAATTATTAGAAGGTG

Downstream 100 bases:

>100_bases
TGGCCTCTATGCTATAACAAATACTATGGGTGTAGAAAGTAAAATAAATATAGCACTTATAAAAAATCCCTCTATCGATG
ACTATGTTCTAATTCATGCA

Product: [NiFe] hydrogenase maturation protein HypF

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>812_residues
MYLTAKDKFNNKKRYLIEIKGIVQGVGFRPFVYNRATELNLKGYVKNKGGMVEVELEGYKENIKSFILELIKSPPIMAKI
EDLKCKFLKPIDYKDFTIKKSSNEKNSVKFISPDVALCKNCIKELNLSTNKRYEYAFINCTDCGPRYSIIKSLPYDRENT
TMKKFAMCNSCKEEYNIPDNRRFHAEPNCCSLCGPLLILLNNKKQVICTNREKEYINNTSNNNDYNENKIHENYINVANL
SYEKNPIYTAAELIKKGYIVAVKGIGGFHLVCNGKDKKAIESLRIRKKRPHKPLAIMCKDLKIVKELCYVSKLEEQILEG
NKKPILILKKKATNILSDNISPFNKYLGVMLPYSPLHYLLFKEGLDIIIATSGNVSGRPMEYKNCEAIENLKTIADYFLI
HNRDIHTPIDDSVVKVINNKESLIRIGRGYAPYNFNIKTKNELLAKGAEEKNTSCLSHKGYVYMSQYIGDLKNIDCYNRH
LNTIEHLQTLLDANPKISIEDLHPNFNTNYENKNYDRTIKVQHHHAHMVSCMVEHSLFDSVIAVVFDGTGFGKDNSIWGG
EFLIGNRTYFKRVGHLKKVKIQGGDKSIKEPWRCALSYLYSINYEKSSIIKNVEEEKIKMIKKALYNNINCYTSSSMGRF
FDAVTSLIGIRNMVSYDGQAPIELENIIDEPISLYYNYSINKIDNVFQIDYKDIILGIIKDLKENKDLSIISSKFHNTVI
DFTCNLVCKIKKTYEMKCKLDKVVLSGGVFQNNYLLKGIYSRLKDNGFKVFFNEKVPINDEGISLGQLAIADSIIEREKR
NVHCNTGENYKY

Sequences:
NA

Specific function: NA

COG id: COG0068

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA