| Definition | Clostridium botulinum A3 str. Loch Maree, complete genome. |
|---|---|
| Accession | NC_010520 |
| Length | 3,992,906 |
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The map label for this gene is smc
Identifier: 170759730
GI number:
Start: 2646234
End: 2649815
Strand: Reverse
Name: smc
Synonym: CLK_1829
Alternate gene names: NA
Gene position: NA
Preceding gene: 170758735
Following gene: 170760312
Centisome position: NA
GC content: NA
Gene sequence:
>3582_bases ATGTTTTTAAAATCAATTGAAATAAGGGGTTTTAAATCTTTTGCAGATAAAACTGAATTAGTATTTAAACAAGGAGTCAC AGCAATAGTAGGTCCTAATGGGAGCGGAAAAAGTAATATATCTGATGCAGTAAGATGGGTGTTAGGAGAACAAAGTGTAA AATCCTTAAGGGGAAGCAAAATGGAGGATGTTATATTTGCTGGTACACAATATAGAAAACCAGTAGGGCTTTGTCAAGTT TCATTGATATTAGATAATAGTGATAAGAATTTACCAATAGAATATGCAGAAGTAACTATAACTAGACGCTTATATAGATC TGGTGAAAGTGAGTATTATATAAATAATACTCAATGTAGACTTAAAGATATACAAGAGTTATTTATGGATACAGGTATAG GTAAAGAAGGATATTCTATAATAGGACAAGGAAAAATAGAGGCAGTTTTAAGTGGAAAGCCGGAGGAGAGAAGAAGTCTT TTAGAAGAAGCCGCAGGTATAGTTAAATTTAAATGGAGAAAAGAAGAGGCAGACAAAAAACTTTCTAATACAGAACAGAA TCTTATAAGAATAAAAGATATATTAAATACTTATGAAGAAAGAATAGAACCACTTAAAGAAGAAAGTGAAAAAGCAAAAA AGTTCCTAAATTTATCAGGGGAATTAAAGCACAAAGAAGTTAATATCATGATATATTCTATAGATAACATAGAAAAAGAC TTAAAAAATATAAGCAGCAATATGCTTTCTTTAGGTGAAAATATAGATAACTTAAAAAATGAAAAATCACAGTACAAAGA AATAAGTTCAAAGTTTAATGAAAGATTAGAACTTCTAGACAAAAATAATAGTAAAAATAAAGAAGAATATTATTATAATA AAGATAAAAATAAAGATATAGAGAATGAAAATGCATTATTAGAAGAGAAAATAAAAAACTTAAAAGATAATATAAAAGTA AAAGAAAATACATTAAAAACTAATGAAGAAAGATTACAAAATTATTTAAAAGAAAAAGAAGCTCTAGAAAAAAACATAAA TAAATTAAAAGAAGAAGAAAGCTATTTAAGAGAAGAAATAGATAAAAAGGAAGACAACGTAAATAATTTTAATAAAGAAC TAAAGGAAAAAGAAGAAAAATTAAAGATACTAAAATCTGAAGAAATAGAAATACTAAGTAATACCTCTAACCTTAGAAAT GAAATATCTGTAATGGAAAATGAGATAGTAAATTTGGAAAATAAATTGGATAATATAAAAAATTCTTGTGATAGCTATAT AAGTTCTATAAATATAAATATAAAGACCAAGGAAGATATAGAAAAAGAAATAAAAAATATAAAAGAAAATATACTTTTAT TAGAAAATAATTTAAAAGAAAATAGTAGAAATATAAGTTCTTTAAAAATATCTCTTAATAATAAAGAAAAAAAATTAAAG GAGAAAAATGCAGCCTACAGTAGATTAGAGGCAAATTATCATATGCTTTCAAATTTAGAGAAACACTATGAAGGATATAA TAGAAGTGTAAAAACTCTGATGGAGCATGTGAGTTATGGGAAAGTAGATAACATTAAGGGAGGCTGCGAAGTTTTAGGAG ACATAATAAAGGTAGAAAAAGAATTAGAAACAGCAATGGAAATAGCTCTAGGGGGAGCTATATCTAATGTTATAACAGAG GATGAAAATAAAGCCAAGATATTAATAAATTATTTAAAGAAAAAAAGCTTAGGAAGGGCTACTTTTCTACCTTTAACCAC AATACAGGGTAGAAAAGCTAAAATAAATAATGTCACAAGAGAAGATGGATTTTTAGGTATAGCCAGTGATCTTATAAATT ATGATGTGAAATTTTCTAATATAATAGATTATGTGCTAGGTAGAACTTTAGTGGCAAAGGATATGGACAGTGCTCTTAAA ATTGCTAAGAAATTAAATTACTCTTTCAAAATAGTAACACTGGAGGGGGAAATTATAAATCCAGGAGGCTCTCTAACAGG TGGTAGTATAAAGCATAGGGCAGGAAGTAGTATAATAAGCCGAAAAAGAGAGATAGAGGAAACTAAGAAAGAATTAGAAG AAACAAAAAATACTATAGAAGAATTTATGAGTAATATATTAGAAAATAAAAATAAAATAAAAAATTCGGATGGGGAAAAT TTAAATATAAAGGACCAAATCTACTATAATAATATAGAAATAACTAAATTTATGGGAAAATTAAATGCTATAAAGGAAGA TACAGAAAGACTTAGAAGCTCTTTAAATATATCAAGAGAAGAAATTAAGTTAACAAAGGATAAAATAAAAGACATTGAAG AGAATATAAATGAATCACAAAAACAATTAGAAGAACTTAAATTAAAAAAGGATTTAAATCATAATGATATAAAAGAATGC GAAGATTTTCTTCAAAATGAAGAGGAAAATGTAAAAAATATAAAGGATAAATTAATAGAATATAAAATAGAAAAAGCTAA ATTAGATGAAATGTTAGTTAGTATAAAAAAAGAATTGTATTCTATGGATACTAATATTACAAATTTAAATAACGAAAATA AAAATATAAATAAAGGTAACCATGAAGATAGAAGCAATATAGAAAAATTTGAAACTAATATAAAAGAAAACGAAAATAAT ATAAAAGATATAAAAATTTATTTAGAGAATTTAGAAGAAAAATTTAAAAAGTATGAAGTAGAAAGAATAAAATTAAAGGA AGAACTAGAAAAGAATAAAAATAAGGAAGAAAATTTAATATTAATTTTAAGTAAAAAAGAAGAGGAAGTCCATAGACAAG ATATACAAAAAACTAGGTACATAACAGAAAGGGACAATTTGTATAACAAATTAAATGAAGAATTTTCCTTAACTTATGCA GAAGCACTTAGTTATAAAGAAGATGATATAAATGTTATGAAATATAAAGAGCATGCACAAAATTTGAAAATAGAGATATC TAATTTGGGCACAGTAAATGTAGGATCAATAGAGGAATATAGGGAATTAAATGAAAAAATAACATTTATGAATAATCAAA AAGAAGATTTAGTAAAGTCAAAAGAAGAACTTTTGAATGTTATTGAAGAAATGACTAATAAAATGCGAACTGTATTTAGT GAGAATTTTAATAAATTAAGAAAAAACTTTAATGAAACATTTATAGAGCTATTTAAGGGTGGTAGTGCAGACTTAATACT GTCTAATGGAGATGAACTTACAGCTAATATAGAAATAAATGTTCAGCCACCGGGAAAAAAGCTTCAGAATATAAATCTTA TGTCTGGTGGGGAAAAGGGATTATCTGCTATAGCATTATTATTTGCTATTTTAAAAATGAAACCTACTCCCTTTTGTATA TTGGATGAAATTGAAGCTGCATTAGATGATGCTAATGTAACTAGATATGCAGGCTTTTTAAAGGAATTTTCAGAAAGCAG TCAGTTTATAGTTATAACTCATAGAAAGGGTACTATGGAAGCCTGCGATGCTCTATATGGAATTACCATGGAAGAAAAGG GTGTTTCAAAGATTATATCTGTGGATTTGACTTCAAAAGATCAAGTGGCAGCTACTTTATAA
Upstream 100 bases:
>100_bases AGAAAAGAGAGAAAAAATGACTAAAATTTTAGTTGTTGTTATGGCTATTGTATTTATTGCTAGCATATTACCGTTTTTTA CCAGATAGGAGTTGTACTAC
Downstream 100 bases:
>100_bases ACAGAGTTTTTAGCTTTAGAGGAAGTTTTTACTCCCACTAAAACTTAGGAAATGGTTATGCAGAGACGGCAGCCGCTCTA ATACTCCCACTTTTAAGAAG
Product: chromosome segregation protein SMC
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1193_residues MFLKSIEIRGFKSFADKTELVFKQGVTAIVGPNGSGKSNISDAVRWVLGEQSVKSLRGSKMEDVIFAGTQYRKPVGLCQV SLILDNSDKNLPIEYAEVTITRRLYRSGESEYYINNTQCRLKDIQELFMDTGIGKEGYSIIGQGKIEAVLSGKPEERRSL LEEAAGIVKFKWRKEEADKKLSNTEQNLIRIKDILNTYEERIEPLKEESEKAKKFLNLSGELKHKEVNIMIYSIDNIEKD LKNISSNMLSLGENIDNLKNEKSQYKEISSKFNERLELLDKNNSKNKEEYYYNKDKNKDIENENALLEEKIKNLKDNIKV KENTLKTNEERLQNYLKEKEALEKNINKLKEEESYLREEIDKKEDNVNNFNKELKEKEEKLKILKSEEIEILSNTSNLRN EISVMENEIVNLENKLDNIKNSCDSYISSININIKTKEDIEKEIKNIKENILLLENNLKENSRNISSLKISLNNKEKKLK EKNAAYSRLEANYHMLSNLEKHYEGYNRSVKTLMEHVSYGKVDNIKGGCEVLGDIIKVEKELETAMEIALGGAISNVITE DENKAKILINYLKKKSLGRATFLPLTTIQGRKAKINNVTREDGFLGIASDLINYDVKFSNIIDYVLGRTLVAKDMDSALK IAKKLNYSFKIVTLEGEIINPGGSLTGGSIKHRAGSSIISRKREIEETKKELEETKNTIEEFMSNILENKNKIKNSDGEN LNIKDQIYYNNIEITKFMGKLNAIKEDTERLRSSLNISREEIKLTKDKIKDIEENINESQKQLEELKLKKDLNHNDIKEC EDFLQNEEENVKNIKDKLIEYKIEKAKLDEMLVSIKKELYSMDTNITNLNNENKNINKGNHEDRSNIEKFETNIKENENN IKDIKIYLENLEEKFKKYEVERIKLKEELEKNKNKEENLILILSKKEEEVHRQDIQKTRYITERDNLYNKLNEEFSLTYA EALSYKEDDINVMKYKEHAQNLKIEISNLGTVNVGSIEEYRELNEKITFMNNQKEDLVKSKEELLNVIEEMTNKMRTVFS ENFNKLRKNFNETFIELFKGGSADLILSNGDELTANIEINVQPPGKKLQNINLMSGGEKGLSAIALLFAILKMKPTPFCI LDEIEAALDDANVTRYAGFLKEFSESSQFIVITHRKGTMEACDALYGITMEEKGVSKIISVDLTSKDQVAATL
Sequences:
NA
Specific function: NA
COG id: COG1196
COG function: function code D; Chromosome segregation ATPases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA