Definition Clostridium botulinum A3 str. Loch Maree, complete genome.
Accession NC_010520
Length 3,992,906

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 170758673

GI number:

Start: 2191093

End: 2192415

Strand: Reverse

Name: Not Available

Synonym: CLK_1404

Alternate gene names: NA

Gene position: NA

Preceding gene: 170759906

Following gene: 170761558

Centisome position: NA

GC content: NA

Gene sequence:

>1323_bases
ATGAGTAGCATAACTAAGGACTTAACTAAGGGATCTCCTTTAAAAGTAATACTTAAGTTTTCATTACCTATGATAGTAGG
AAATATATTTCAGCAATTATATAATGTTGTAGATTCAATAATAGTAGGAAAATTTATAGGTACAAAGGCTTTAGCCGCTG
TAGGCTCTTCCTTTGCTATTATGGTTTTTATAACATCCATTTTGCTAGGATTATGCATGGGTACTTCTATTGTGTTTTCA
CAATTTTTTGGCGGGAAAAAGATAAATAAGTTAAAGGCCAGTATATCTACATCCTTTATTTTTATAGGAATTACCTCTAT
TGTAATAAGTGGGTTATCCTTAATATTTGTAGATGAGATTATTTTATTTATGAAAATTCCAAAGGAATTATTTGTAGATA
CTAGAGCTTATCTTAGCATAATATTTAGTGGTATATTTTTCACCTTTTTATATAATTGGGCAGCAGGTCTTTTAAGGGCT
CTTGGAAATTCTAAAGTGCCATTATATTTTTTAATTTTAGCTGCTATTATAAACATAGTATTAGATCTTGTATTTGTAAT
TACTTTTAACATGGGTGTGTCTGGTACAGCTATAGCTACGGTTATTGCACAATTTGTTTCGGCTATTTTGTGTATTGTAT
ATTGTATAAAAAAGTTAGATTTCTTAGAGTTTAAACTAAGTGAAATTAAATTTGATAAAGAAATATTTAAACTAACAGCG
AGTTATTCCTTGCTTACATCAATACAACAATCTATTATGAATTTTGGAATATTAATGATACAGGGTTTGGTAAATTCCTT
CGGTATAGCTCCTATGGCAGCCTTTGCAGCAGCAGTTAAGATTGATTCCTTTGCTTATATGCCTGTACAAGATTTTGGGA
ATGCTTTCTCTACTTATATTGCCCAAAACAAAGGAGCAGAGAAAGATGAAAGAATCAAAAGTGGTATCAAAGTATCTTTA
AAGATTATAACTATATTTTGTATTTTAATATCTTTAGTTGTATGGATTATGGCAGATAAATTTATGTTAATATTTATAAA
TCCTACAGAAACTCAGGTTATAAAAATAGGAGTACAGTATTTACGAATTGTATGTACATTTTATTGTTTCATAGGTTACT
TATTTATGTTTTATGGTTTATATAGAGGTTTAGGTAAGGTTAAAATGTCCATAGTTTTGACTATAATATCCCTTGGATTA
CGAGTAGTCCTTGCTTTCATTACAGCTCCTTATTTAGGATTAAAGGGAATTTGGTGGGCAATTCCTATAGGGTGGATTAT
AGCAGATATAGTAGGAATGATATATTATAAATTTATTAGTTAA

Upstream 100 bases:

>100_bases
AAATTTATGAGATTTAATACACATTATTGTGAGGACAAGCTTCTTTTGCCGAACTTACCCCACAAGCTTTTGATTTATAA
ATTAGATTTGGAGAAGAATA

Downstream 100 bases:

>100_bases
TGTTAAATTTTTATAAGGATTAAAAATAAAATGCTCTAAAATGGAACAAAAATTATAAAATTAATAGATTTATAAAAAAA
TGATATAAAAATGTGTTATA

Product: MATE efflux family protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>440_residues
MSSITKDLTKGSPLKVILKFSLPMIVGNIFQQLYNVVDSIIVGKFIGTKALAAVGSSFAIMVFITSILLGLCMGTSIVFS
QFFGGKKINKLKASISTSFIFIGITSIVISGLSLIFVDEIILFMKIPKELFVDTRAYLSIIFSGIFFTFLYNWAAGLLRA
LGNSKVPLYFLILAAIINIVLDLVFVITFNMGVSGTAIATVIAQFVSAILCIVYCIKKLDFLEFKLSEIKFDKEIFKLTA
SYSLLTSIQQSIMNFGILMIQGLVNSFGIAPMAAFAAAVKIDSFAYMPVQDFGNAFSTYIAQNKGAEKDERIKSGIKVSL
KIITIFCILISLVVWIMADKFMLIFINPTETQVIKIGVQYLRIVCTFYCFIGYLFMFYGLYRGLGKVKMSIVLTIISLGL
RVVLAFITAPYLGLKGIWWAIPIGWIIADIVGMIYYKFIS

Sequences:
NA

Specific function: NA

COG id: COG0534

COG function: function code V; Na+-driven multidrug efflux pump

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA