| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is bdhA [H]
Identifier: 170757833
GI number: 170757833
Start: 2412346
End: 2413419
Strand: Reverse
Name: bdhA [H]
Synonym: CLD_2359
Alternate gene names: 170757833
Gene position: 2413419-2412346 (Counterclockwise)
Preceding gene: 170756115
Following gene: 170756297
Centisome position: 60.97
GC content: 34.26
Gene sequence:
>1074_bases ATGAAAGCAGCATTATGGTATGAAAAAAAAGATGTAAGAGTGGAAGAAATTGAAGAACCAAAGGTAGTAGAAGGATCTGT AAAAATTAAAGTAAAATGGTGTGGAATATGTGGTTCCGATTTACATGAATATTTAGGAGGCCCTATATTTATTCCAGTAG GACAACCTCATGCGTTAAGTGGAACAACAGCACCAGTAGTTTTAGGACACGAATTTTCAGGAGAAATAATAGAATTAGGA CAAGGTGTAACAAAATTTAATATTGGAGATAGGGTAATTGTTGAACCTATAGTAGCTTGTGGAAAATGTCCAGCCTGTAT GGAAGGGAAATATAATCTTTGTTCATCTTTAGGTTTTCATGGACTTTGTGGAAGTGGCGGTGGACTTGCAGAATATACTG TATTTCCAGAGGAATTTGTTCATAAAATTCCAGATGAAATGTCCTATGAGGATGCGGCCTTAGTAGAACCAATGGCAGTA GCACTTCATTCTGTAAGAATAGCTAATTTTAATACAGGAGATACAGCTTTAGTATTAGGTGCAGGACCAATAGGTCTTGC CACAATAGAATGCTTAAAAGCAGCTGGAGCAAGACTCATAGTAGTTTTACAAAGAAAATCTATAAGACAAAAATATGCAA AAAGAGCAGGGGCAGATGTAGTTTTAGATCCTAATGAAGTTAATATACCAGAAGAAGTTAAAAAACTTACAGATGGGTTA GGTGTAGATGTAGCCTTTGAAACCACAGGAGCTAAGATAGGATTTGATACTGGTATTGAAAGCTTAAAATTTGAAGGTAC AATGGTTATAACTAGTATATGGGAAAAGGATACAAACTTTAATCCGAATGTATTAGTATTTACTGAAAAGAAAATTGTAG GAACTTTAGCATATAGACATGAATTCCCAGCCACTATGGCGTTAATGAAGGATGGAAGAATAAAAACAGATGGATATATT ACAAAGAAAATAGCTTTAGATGATATAGTAGAAGAAGGATTTGGGGCTTTAACTGGACCGGAAAAGAAAAAACATGTAAA AATTATTGTAACTCCAGATAAATCACTTTTATAA
Upstream 100 bases:
>100_bases CTATAAATTTAGCGGAATTAAAACTTTGGCATTATAATTGCTTTAATATATGTTAATTAATTAACATACATGTTTAAAAT TAAACTTTAGGAGGGCTATT
Downstream 100 bases:
>100_bases ATTAATTATTTTTAGATCACATATTTAACCTACTAAAATTTGTTTATAGTAGGTTAAATATTTTTAAGAATCAATGTTTA ACATTTTTATTTATCAATTC
Product: zinc-binding dehydrogenase family oxidoreductase
Products: NA
Alternate protein names: Acetoin reductase/2,3-butanediol dehydrogenase; AR/BDH [H]
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MKAALWYEKKDVRVEEIEEPKVVEGSVKIKVKWCGICGSDLHEYLGGPIFIPVGQPHALSGTTAPVVLGHEFSGEIIELG QGVTKFNIGDRVIVEPIVACGKCPACMEGKYNLCSSLGFHGLCGSGGGLAEYTVFPEEFVHKIPDEMSYEDAALVEPMAV ALHSVRIANFNTGDTALVLGAGPIGLATIECLKAAGARLIVVLQRKSIRQKYAKRAGADVVLDPNEVNIPEEVKKLTDGL GVDVAFETTGAKIGFDTGIESLKFEGTMVITSIWEKDTNFNPNVLVFTEKKIVGTLAYRHEFPATMALMKDGRIKTDGYI TKKIALDDIVEEGFGALTGPEKKKHVKIIVTPDKSLL
Sequences:
>Translated_357_residues MKAALWYEKKDVRVEEIEEPKVVEGSVKIKVKWCGICGSDLHEYLGGPIFIPVGQPHALSGTTAPVVLGHEFSGEIIELG QGVTKFNIGDRVIVEPIVACGKCPACMEGKYNLCSSLGFHGLCGSGGGLAEYTVFPEEFVHKIPDEMSYEDAALVEPMAV ALHSVRIANFNTGDTALVLGAGPIGLATIECLKAAGARLIVVLQRKSIRQKYAKRAGADVVLDPNEVNIPEEVKKLTDGL GVDVAFETTGAKIGFDTGIESLKFEGTMVITSIWEKDTNFNPNVLVFTEKKIVGTLAYRHEFPATMALMKDGRIKTDGYI TKKIALDDIVEEGFGALTGPEKKKHVKIIVTPDKSLL >Mature_357_residues MKAALWYEKKDVRVEEIEEPKVVEGSVKIKVKWCGICGSDLHEYLGGPIFIPVGQPHALSGTTAPVVLGHEFSGEIIELG QGVTKFNIGDRVIVEPIVACGKCPACMEGKYNLCSSLGFHGLCGSGGGLAEYTVFPEEFVHKIPDEMSYEDAALVEPMAV ALHSVRIANFNTGDTALVLGAGPIGLATIECLKAAGARLIVVLQRKSIRQKYAKRAGADVVLDPNEVNIPEEVKKLTDGL GVDVAFETTGAKIGFDTGIESLKFEGTMVITSIWEKDTNFNPNVLVFTEKKIVGTLAYRHEFPATMALMKDGRIKTDGYI TKKIALDDIVEEGFGALTGPEKKKHVKIIVTPDKSLL
Specific function: Unknown
COG id: COG1063
COG function: function code ER; Threonine dehydrogenase and related Zn-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI156627571, Length=325, Percent_Identity=30.4615384615385, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI4501929, Length=369, Percent_Identity=29.810298102981, Blast_Score=109, Evalue=4e-24, Organism=Homo sapiens, GI4501933, Length=385, Percent_Identity=29.6103896103896, Blast_Score=108, Evalue=8e-24, Organism=Homo sapiens, GI34577061, Length=385, Percent_Identity=28.5714285714286, Blast_Score=105, Evalue=5e-23, Organism=Homo sapiens, GI262073058, Length=378, Percent_Identity=27.7777777777778, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI71743840, Length=378, Percent_Identity=27.7777777777778, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI4501939, Length=363, Percent_Identity=26.1707988980716, Blast_Score=88, Evalue=9e-18, Organism=Homo sapiens, GI156523966, Length=363, Percent_Identity=26.1707988980716, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI71565154, Length=273, Percent_Identity=30.4029304029304, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI71565152, Length=367, Percent_Identity=26.7029972752044, Blast_Score=75, Evalue=7e-14, Organism=Escherichia coli, GI1788073, Length=320, Percent_Identity=34.6875, Blast_Score=178, Evalue=6e-46, Organism=Escherichia coli, GI1787863, Length=232, Percent_Identity=35.7758620689655, Blast_Score=137, Evalue=1e-33, Organism=Escherichia coli, GI226510992, Length=333, Percent_Identity=29.1291291291291, Blast_Score=135, Evalue=3e-33, Organism=Escherichia coli, GI1788075, Length=354, Percent_Identity=29.0960451977401, Blast_Score=133, Evalue=1e-32, Organism=Escherichia coli, GI1790045, Length=338, Percent_Identity=29.2899408284024, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI1788407, Length=271, Percent_Identity=30.2583025830258, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1786825, Length=299, Percent_Identity=29.0969899665552, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1790718, Length=309, Percent_Identity=27.1844660194175, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI87082125, Length=305, Percent_Identity=29.5081967213115, Blast_Score=104, Evalue=8e-24, Organism=Escherichia coli, GI1786552, Length=354, Percent_Identity=26.8361581920904, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI87081918, Length=317, Percent_Identity=23.6593059936909, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1787572, Length=231, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1786518, Length=295, Percent_Identity=26.7796610169492, Blast_Score=66, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17562876, Length=337, Percent_Identity=31.4540059347181, Blast_Score=172, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17562878, Length=266, Percent_Identity=33.8345864661654, Blast_Score=145, Evalue=3e-35, Organism=Caenorhabditis elegans, GI71997431, Length=284, Percent_Identity=29.5774647887324, Blast_Score=82, Evalue=6e-16, Organism=Caenorhabditis elegans, GI25146526, Length=284, Percent_Identity=29.5774647887324, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17562584, Length=278, Percent_Identity=26.2589928057554, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71988145, Length=325, Percent_Identity=24.6153846153846, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17565904, Length=220, Percent_Identity=30.4545454545455, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17562582, Length=311, Percent_Identity=25.08038585209, Blast_Score=68, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6319257, Length=383, Percent_Identity=36.5535248041775, Blast_Score=241, Evalue=2e-64, Organism=Saccharomyces cerevisiae, GI6319258, Length=381, Percent_Identity=36.745406824147, Blast_Score=221, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6322619, Length=326, Percent_Identity=32.8220858895706, Blast_Score=173, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6319955, Length=326, Percent_Identity=32.8220858895706, Blast_Score=172, Evalue=7e-44, Organism=Saccharomyces cerevisiae, GI6323099, Length=326, Percent_Identity=31.2883435582822, Blast_Score=155, Evalue=7e-39, Organism=Saccharomyces cerevisiae, GI6320033, Length=280, Percent_Identity=31.0714285714286, Blast_Score=95, Evalue=2e-20, Organism=Drosophila melanogaster, GI17137530, Length=323, Percent_Identity=30.9597523219814, Blast_Score=149, Evalue=2e-36, Organism=Drosophila melanogaster, GI17737897, Length=333, Percent_Identity=29.7297297297297, Blast_Score=149, Evalue=3e-36, Organism=Drosophila melanogaster, GI221457811, Length=331, Percent_Identity=24.4712990936556, Blast_Score=104, Evalue=9e-23, Organism=Drosophila melanogaster, GI45550770, Length=331, Percent_Identity=24.4712990936556, Blast_Score=104, Evalue=9e-23, Organism=Drosophila melanogaster, GI45551930, Length=331, Percent_Identity=24.4712990936556, Blast_Score=104, Evalue=9e-23, Organism=Drosophila melanogaster, GI17737895, Length=303, Percent_Identity=30.6930693069307, Blast_Score=87, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.4 [H]
Molecular weight: Translated: 38546; Mature: 38546
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAALWYEKKDVRVEEIEEPKVVEGSVKIKVKWCGICGSDLHEYLGGPIFIPVGQPHALS CCCCEEECCCCCCHHHCCCCCEEECEEEEEEEEECCCCHHHHHHCCCCEEEECCCCCCCC GTTAPVVLGHEFSGEIIELGQGVTKFNIGDRVIVEPIVACGKCPACMEGKYNLCSSLGFH CCCCEEEEECCCCCCHHHHCCCCEEECCCCCHHHHHHHHCCCCCHHCCCCHHHHHHCCCC GLCGSGGGLAEYTVFPEEFVHKIPDEMSYEDAALVEPMAVALHSVRIANFNTGDTALVLG CCCCCCCCCEEEEECHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCEEEEEE AGPIGLATIECLKAAGARLIVVLQRKSIRQKYAKRAGADVVLDPNEVNIPEEVKKLTDGL CCCHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCC GVDVAFETTGAKIGFDTGIESLKFEGTMVITSIWEKDTNFNPNVLVFTEKKIVGTLAYRH CEEEEEECCCCEEECCCCCCCEEECCEEEEEEEECCCCCCCCCEEEEECCHHHHHHHHHH EFPATMALMKDGRIKTDGYITKKIALDDIVEEGFGALTGPEKKKHVKIIVTPDKSLL CCCHHHHHHCCCCEECCCEEEEHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCC >Mature Secondary Structure MKAALWYEKKDVRVEEIEEPKVVEGSVKIKVKWCGICGSDLHEYLGGPIFIPVGQPHALS CCCCEEECCCCCCHHHCCCCCEEECEEEEEEEEECCCCHHHHHHCCCCEEEECCCCCCCC GTTAPVVLGHEFSGEIIELGQGVTKFNIGDRVIVEPIVACGKCPACMEGKYNLCSSLGFH CCCCEEEEECCCCCCHHHHCCCCEEECCCCCHHHHHHHHCCCCCHHCCCCHHHHHHCCCC GLCGSGGGLAEYTVFPEEFVHKIPDEMSYEDAALVEPMAVALHSVRIANFNTGDTALVLG CCCCCCCCCEEEEECHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCEEEEEE AGPIGLATIECLKAAGARLIVVLQRKSIRQKYAKRAGADVVLDPNEVNIPEEVKKLTDGL CCCHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCC GVDVAFETTGAKIGFDTGIESLKFEGTMVITSIWEKDTNFNPNVLVFTEKKIVGTLAYRH CEEEEEECCCCEEECCCCCCCEEECCEEEEEEEECCCCCCCCCEEEEECCHHHHHHHHHH EFPATMALMKDGRIKTDGYITKKIALDDIVEEGFGALTGPEKKKHVKIIVTPDKSLL CCCHHHHHHCCCCEECCCEEEEHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9455482; 9384377 [H]