| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757828
Identifier: 170757828
GI number: 170757828
Start: 978240
End: 978614
Strand: Direct
Name: 170757828
Synonym: CLD_3699
Alternate gene names: NA
Gene position: 978240-978614 (Clockwise)
Preceding gene: 170754594
Following gene: 170754925
Centisome position: 24.71
GC content: 25.33
Gene sequence:
>375_bases ATGAGAAGAATTTTAGATGTTAGGCTTATAAAGCAGTATATTAAAAAACATAATATAGAACAGAAGTTTGATTGTGAAAT ATTAAAATATGCACAACTTCATTTCTATGAAAAAGAAGAGTATATATTAGAATTAGGGGAAGATCTTGAATATTATTACT TACTTGTAGATGGTAAAATTAAAATTTATTATCCTTTTGAAAATGGGAAATCAATGCTTTTAAAATTCTATAAAGATTTT AATACTATAGGAGATTTAGAACGTTTAAAAGATATTCCTATCCTTTGCAATATTGATGCAGTAGAAGATACTTACTTGAT AGCAATACCTGCAGCTATACTTAGAAATTGCACAATTTTTAGGTACAACATATAG
Upstream 100 bases:
>100_bases TATACTTATTCAAATTTATTCACCCCTTTACAAGTCGTTATAAATAAAATAATATATTTATAACAATTAGGACATGACAT TAGTCATGTTAGGAGGTTTT
Downstream 100 bases:
>100_bases ACATTTGAATAGAACTCTTAAAGAAATGGAATCAAGGTCAATTATAAGATATGATGATAAAAAAATACATATATTGGATA TAAATCAACTTAGGGAATTG
Product: cyclic nucleotide-binding regulatory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MRRILDVRLIKQYIKKHNIEQKFDCEILKYAQLHFYEKEEYILELGEDLEYYYLLVDGKIKIYYPFENGKSMLLKFYKDF NTIGDLERLKDIPILCNIDAVEDTYLIAIPAAILRNCTIFRYNI
Sequences:
>Translated_124_residues MRRILDVRLIKQYIKKHNIEQKFDCEILKYAQLHFYEKEEYILELGEDLEYYYLLVDGKIKIYYPFENGKSMLLKFYKDF NTIGDLERLKDIPILCNIDAVEDTYLIAIPAAILRNCTIFRYNI >Mature_124_residues MRRILDVRLIKQYIKKHNIEQKFDCEILKYAQLHFYEKEEYILELGEDLEYYYLLVDGKIKIYYPFENGKSMLLKFYKDF NTIGDLERLKDIPILCNIDAVEDTYLIAIPAAILRNCTIFRYNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15003; Mature: 15003
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRILDVRLIKQYIKKHNIEQKFDCEILKYAQLHFYEKEEYILELGEDLEYYYLLVDGKI CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEECCHHHHHHCCCCCEEEEEEEECEE KIYYPFENGKSMLLKFYKDFNTIGDLERLKDIPILCNIDAVEDTYLIAIPAAILRNCTIF EEEEECCCCHHHHHHHHHHHCCCCCHHHHCCCCEEEECCCCCCEEEEEEHHHHHCCCEEE RYNI EEEC >Mature Secondary Structure MRRILDVRLIKQYIKKHNIEQKFDCEILKYAQLHFYEKEEYILELGEDLEYYYLLVDGKI CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEECCHHHHHHCCCCCEEEEEEEECEE KIYYPFENGKSMLLKFYKDFNTIGDLERLKDIPILCNIDAVEDTYLIAIPAAILRNCTIF EEEEECCCCHHHHHHHHHHHCCCCCHHHHCCCCEEEECCCCCCEEEEEEHHHHHCCCEEE RYNI EEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA