Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170757828

Identifier: 170757828

GI number: 170757828

Start: 978240

End: 978614

Strand: Direct

Name: 170757828

Synonym: CLD_3699

Alternate gene names: NA

Gene position: 978240-978614 (Clockwise)

Preceding gene: 170754594

Following gene: 170754925

Centisome position: 24.71

GC content: 25.33

Gene sequence:

>375_bases
ATGAGAAGAATTTTAGATGTTAGGCTTATAAAGCAGTATATTAAAAAACATAATATAGAACAGAAGTTTGATTGTGAAAT
ATTAAAATATGCACAACTTCATTTCTATGAAAAAGAAGAGTATATATTAGAATTAGGGGAAGATCTTGAATATTATTACT
TACTTGTAGATGGTAAAATTAAAATTTATTATCCTTTTGAAAATGGGAAATCAATGCTTTTAAAATTCTATAAAGATTTT
AATACTATAGGAGATTTAGAACGTTTAAAAGATATTCCTATCCTTTGCAATATTGATGCAGTAGAAGATACTTACTTGAT
AGCAATACCTGCAGCTATACTTAGAAATTGCACAATTTTTAGGTACAACATATAG

Upstream 100 bases:

>100_bases
TATACTTATTCAAATTTATTCACCCCTTTACAAGTCGTTATAAATAAAATAATATATTTATAACAATTAGGACATGACAT
TAGTCATGTTAGGAGGTTTT

Downstream 100 bases:

>100_bases
ACATTTGAATAGAACTCTTAAAGAAATGGAATCAAGGTCAATTATAAGATATGATGATAAAAAAATACATATATTGGATA
TAAATCAACTTAGGGAATTG

Product: cyclic nucleotide-binding regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MRRILDVRLIKQYIKKHNIEQKFDCEILKYAQLHFYEKEEYILELGEDLEYYYLLVDGKIKIYYPFENGKSMLLKFYKDF
NTIGDLERLKDIPILCNIDAVEDTYLIAIPAAILRNCTIFRYNI

Sequences:

>Translated_124_residues
MRRILDVRLIKQYIKKHNIEQKFDCEILKYAQLHFYEKEEYILELGEDLEYYYLLVDGKIKIYYPFENGKSMLLKFYKDF
NTIGDLERLKDIPILCNIDAVEDTYLIAIPAAILRNCTIFRYNI
>Mature_124_residues
MRRILDVRLIKQYIKKHNIEQKFDCEILKYAQLHFYEKEEYILELGEDLEYYYLLVDGKIKIYYPFENGKSMLLKFYKDF
NTIGDLERLKDIPILCNIDAVEDTYLIAIPAAILRNCTIFRYNI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15003; Mature: 15003

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRILDVRLIKQYIKKHNIEQKFDCEILKYAQLHFYEKEEYILELGEDLEYYYLLVDGKI
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEECCHHHHHHCCCCCEEEEEEEECEE
KIYYPFENGKSMLLKFYKDFNTIGDLERLKDIPILCNIDAVEDTYLIAIPAAILRNCTIF
EEEEECCCCHHHHHHHHHHHCCCCCHHHHCCCCEEEECCCCCCEEEEEEHHHHHCCCEEE
RYNI
EEEC
>Mature Secondary Structure
MRRILDVRLIKQYIKKHNIEQKFDCEILKYAQLHFYEKEEYILELGEDLEYYYLLVDGKI
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEECCHHHHHHCCCCCEEEEEEEECEE
KIYYPFENGKSMLLKFYKDFNTIGDLERLKDIPILCNIDAVEDTYLIAIPAAILRNCTIF
EEEEECCCCHHHHHHHHHHHCCCCCHHHHCCCCEEEECCCCCCEEEEEEHHHHHCCCEEE
RYNI
EEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA