| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757819
Identifier: 170757819
GI number: 170757819
Start: 1627242
End: 1628012
Strand: Direct
Name: 170757819
Synonym: CLD_3089
Alternate gene names: NA
Gene position: 1627242-1628012 (Clockwise)
Preceding gene: 170755316
Following gene: 170757335
Centisome position: 41.11
GC content: 22.18
Gene sequence:
>771_bases ATGAGTAAAGATTTAATAAGCACAGACGAATACATAAAAATAAAAAAAAAGAGAAAAAGAATAAAAAAAATAGTAGTATT ATTTATATTTTTAATATCTATTTTGGTAACATTATGCCTTAAAATACCTTATTTTAATATAGAATCAATTGAGATAAAAG GTAACGTAAATATACCTAAAGAGGTAATAAAAGATAGCTCTACTATTAAAACTGGCAATAATATATTTTATACTAACAAA AAGGATGCAATAGAAAATATTTCATTGAATCCATATATTGAAGAAGTAAAAATCACAAAAAAACTTCCTAATAAATTAGA AATATATGTTAAGGAAAGGGAAGCTTTGTTTTATAATAAAGTGGACAAGGATTTTTTTATTATATCTAAAAATGGATGTG TATTAGAAAAAAGAAAAGAGATTAAGAATATGAAGCTCATTAATTTACAGGGATTTGAATTTAATGAATCTAAAATAGGG AGCGCTTTAAAAGCTAAAGATGAAAGAGCAGTAAAAATTTTAAATGATTTTGGAGTTCTATTAAAAAATAATACTTCTGA TGTAATTTTTACTCAGTTAGATTTAAGAAATTTATTAGATATTAAAATTTACTATAATGGTATATGCGTAAAAATAGGTA CATCAGACCAAATAGAAAAAAAATTAAATACAGCTATAAATATTTTAAAAAGGGATGAACTTAAAAAAGCAAAAAAAGGA TATGTAGATGTGAGTTATGAAGGAAATCCTGTATTTTATATAGAAAAATAG
Upstream 100 bases:
>100_bases GAAATATTGTAATTATTTTTTAATGAAATAATTGAATTAAAATGTTAAAATAAATTTGAGTTTAGATTGTAAATAGATTA AATTTTAGGTAGGTAGAATA
Downstream 100 bases:
>100_bases GAGGTAAGAAATGAAAAAGACTTCACAAATTAGTATAGCATTAGTTTGTGCTATATTAGGATTTATGCTATCTTATCAAT TTAAATCCATAGTAAAACAA
Product: cell division protein FtsQ
Products: NA
Alternate protein names: Polypeptide-Transport-Associated Domain-Containing Protein; Septal Protein DivIB/FtsQ; Polypeptide-Transport-Associated Domain Protein FtsQ-Type; POTRA Domain-Containing Protein FtsQ-Type
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSKDLISTDEYIKIKKKRKRIKKIVVLFIFLISILVTLCLKIPYFNIESIEIKGNVNIPKEVIKDSSTIKTGNNIFYTNK KDAIENISLNPYIEEVKITKKLPNKLEIYVKEREALFYNKVDKDFFIISKNGCVLEKRKEIKNMKLINLQGFEFNESKIG SALKAKDERAVKILNDFGVLLKNNTSDVIFTQLDLRNLLDIKIYYNGICVKIGTSDQIEKKLNTAINILKRDELKKAKKG YVDVSYEGNPVFYIEK
Sequences:
>Translated_256_residues MSKDLISTDEYIKIKKKRKRIKKIVVLFIFLISILVTLCLKIPYFNIESIEIKGNVNIPKEVIKDSSTIKTGNNIFYTNK KDAIENISLNPYIEEVKITKKLPNKLEIYVKEREALFYNKVDKDFFIISKNGCVLEKRKEIKNMKLINLQGFEFNESKIG SALKAKDERAVKILNDFGVLLKNNTSDVIFTQLDLRNLLDIKIYYNGICVKIGTSDQIEKKLNTAINILKRDELKKAKKG YVDVSYEGNPVFYIEK >Mature_255_residues SKDLISTDEYIKIKKKRKRIKKIVVLFIFLISILVTLCLKIPYFNIESIEIKGNVNIPKEVIKDSSTIKTGNNIFYTNKK DAIENISLNPYIEEVKITKKLPNKLEIYVKEREALFYNKVDKDFFIISKNGCVLEKRKEIKNMKLINLQGFEFNESKIGS ALKAKDERAVKILNDFGVLLKNNTSDVIFTQLDLRNLLDIKIYYNGICVKIGTSDQIEKKLNTAINILKRDELKKAKKGY VDVSYEGNPVFYIEK
Specific function: Unknown
COG id: COG1589
COG function: function code M; Cell division septal protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29659; Mature: 29528
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKDLISTDEYIKIKKKRKRIKKIVVLFIFLISILVTLCLKIPYFNIESIEIKGNVNIPK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCH EVIKDSSTIKTGNNIFYTNKKDAIENISLNPYIEEVKITKKLPNKLEIYVKEREALFYNK HHHCCCCCEECCCEEEEECCCHHHHCCCCCCHHHHEEHHHHCCCEEEEEEEECHHHEEEC VDKDFFIISKNGCVLEKRKEIKNMKLINLQGFEFNESKIGSALKAKDERAVKILNDFGVL CCCCEEEEECCCCEEHHHHHHCCEEEEEEECCCCCHHHHCHHHHCCCHHHHHHHHHCCEE LKNNTSDVIFTQLDLRNLLDIKIYYNGICVKIGTSDQIEKKLNTAINILKRDELKKAKKG EECCCCCEEEEEECCCCEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC YVDVSYEGNPVFYIEK CEEEEECCCEEEEEEC >Mature Secondary Structure SKDLISTDEYIKIKKKRKRIKKIVVLFIFLISILVTLCLKIPYFNIESIEIKGNVNIPK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCH EVIKDSSTIKTGNNIFYTNKKDAIENISLNPYIEEVKITKKLPNKLEIYVKEREALFYNK HHHCCCCCEECCCEEEEECCCHHHHCCCCCCHHHHEEHHHHCCCEEEEEEEECHHHEEEC VDKDFFIISKNGCVLEKRKEIKNMKLINLQGFEFNESKIGSALKAKDERAVKILNDFGVL CCCCEEEEECCCCEEHHHHHHCCEEEEEEECCCCCHHHHCHHHHCCCHHHHHHHHHCCEE LKNNTSDVIFTQLDLRNLLDIKIYYNGICVKIGTSDQIEKKLNTAINILKRDELKKAKKG EECCCCCEEEEEECCCCEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC YVDVSYEGNPVFYIEK CEEEEECCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA