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The map label for this gene is nudL [H]

Identifier: 170757778

GI number: 170757778

Start: 1571829

End: 1572452

Strand: Direct

Name: nudL [H]

Synonym: CLD_3132

Alternate gene names: 170757778

Gene position: 1571829-1572452 (Clockwise)

Preceding gene: 170754392

Following gene: 170754748

Centisome position: 39.71

GC content: 27.88

Gene sequence:

>624_bases
ATGAAAAGAGAGTTAATAGATACAGTATATGAAAAATTTCAATATAGAAAAGCAAAGCCTATAGGTAATTTCAAAAGAAG
TTCAGTAATGATATTATTAAATAAAGTAGGTACAAATATTAATATAATATTTGAAGTAAGAGCATTAACTTTAAAAAATC
AACCAGGAGATGTTTGTCTGCCAGGTGGAAAAATGGAAAAGGGAGAAAAACCTCTAGAAGCAGCTTTAAGAGAAACTGTA
GAAGAACTTAATATAGATAAAGAAAAAATAAAGGTAATAGGACAGATGGATTATTTCATTAGTCCATATAATTTTGTGAT
GTATCCTTTTGTCGCGATAGTGGAAGACATAGATATAGCTCCTGATAAAGAGGAAGTAGATCACGTATTTGAAGTACCTA
TAGAGTTTTTTTTAGAAAATTCACCTACTTGTTACGAAATAGATATAGTACCTAGTATAACAGGAGATTTCCCTTTTTCT
CTTATAAGAAATGGTAAAAACTATAAATTTAGTAAGGGAACTATCCCTGAATATTTCTATGAATATGAAGGTAATGTTAT
ATGGGGATTTACAGCGCTTATTGTAAAAAATTTTATAGATATAATTAAGGACAAAAAAAATTAA

Upstream 100 bases:

>100_bases
ATTTATAATGATACCATGAAACAGAAAGAAATTATTAAATATTCAGTAATAAATAAGTACCTAACTTTAATTTAGGTATA
AATTATTTTTAGGAGGAACC

Downstream 100 bases:

>100_bases
TAAAAGTATATTAAATATTCCACCAACTTTTAATTAGTTGGTGGAATGTTTTAAATACTTTTTTCCTGTTTTCTCATACC
AGCTATTGCAACTGATATAA

Product: MutT/NUDIX NTP pyrophosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MKRELIDTVYEKFQYRKAKPIGNFKRSSVMILLNKVGTNINIIFEVRALTLKNQPGDVCLPGGKMEKGEKPLEAALRETV
EELNIDKEKIKVIGQMDYFISPYNFVMYPFVAIVEDIDIAPDKEEVDHVFEVPIEFFLENSPTCYEIDIVPSITGDFPFS
LIRNGKNYKFSKGTIPEYFYEYEGNVIWGFTALIVKNFIDIIKDKKN

Sequences:

>Translated_207_residues
MKRELIDTVYEKFQYRKAKPIGNFKRSSVMILLNKVGTNINIIFEVRALTLKNQPGDVCLPGGKMEKGEKPLEAALRETV
EELNIDKEKIKVIGQMDYFISPYNFVMYPFVAIVEDIDIAPDKEEVDHVFEVPIEFFLENSPTCYEIDIVPSITGDFPFS
LIRNGKNYKFSKGTIPEYFYEYEGNVIWGFTALIVKNFIDIIKDKKN
>Mature_207_residues
MKRELIDTVYEKFQYRKAKPIGNFKRSSVMILLNKVGTNINIIFEVRALTLKNQPGDVCLPGGKMEKGEKPLEAALRETV
EELNIDKEKIKVIGQMDYFISPYNFVMYPFVAIVEDIDIAPDKEEVDHVFEVPIEFFLENSPTCYEIDIVPSITGDFPFS
LIRNGKNYKFSKGTIPEYFYEYEGNVIWGFTALIVKNFIDIIKDKKN

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17536993, Length=181, Percent_Identity=24.3093922651934, Blast_Score=70, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 23929; Mature: 23929

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRELIDTVYEKFQYRKAKPIGNFKRSSVMILLNKVGTNINIIFEVRALTLKNQPGDVCL
CCHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEEECCCCCEEEEEEEEEEEECCCCCCEEE
PGGKMEKGEKPLEAALRETVEELNIDKEKIKVIGQMDYFISPYNFVMYPFVAIVEDIDIA
CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
PDKEEVDHVFEVPIEFFLENSPTCYEIDIVPSITGDFPFSLIRNGKNYKFSKGTIPEYFY
CCHHHHHHHHHCCHHHEECCCCCEEEEEEECCCCCCCCHHHHHCCCCCEECCCCCCHHHH
EYEGNVIWGFTALIVKNFIDIIKDKKN
HCCCCEEEHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKRELIDTVYEKFQYRKAKPIGNFKRSSVMILLNKVGTNINIIFEVRALTLKNQPGDVCL
CCHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEEECCCCCEEEEEEEEEEEECCCCCCEEE
PGGKMEKGEKPLEAALRETVEELNIDKEKIKVIGQMDYFISPYNFVMYPFVAIVEDIDIA
CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
PDKEEVDHVFEVPIEFFLENSPTCYEIDIVPSITGDFPFSLIRNGKNYKFSKGTIPEYFY
CCHHHHHHHHHCCHHHEECCCCCEEEEEEECCCCCCCCHHHHHCCCCCEECCCCCCHHHH
EYEGNVIWGFTALIVKNFIDIIKDKKN
HCCCCEEEHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]