| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is pgsA
Identifier: 170757752
GI number: 170757752
Start: 2522055
End: 2522639
Strand: Reverse
Name: pgsA
Synonym: CLD_2235
Alternate gene names: 170757752
Gene position: 2522639-2522055 (Counterclockwise)
Preceding gene: 170754856
Following gene: 170755068
Centisome position: 63.73
GC content: 30.43
Gene sequence:
>585_bases ATGAACTTAGCAAATAAACTAACTATATTAAGAATTTTTTTAGTCCCAATATTTCTTATATTTATATCAGTAAAAAACAT ACCCTATGGTACAGTAATAGCTACTGCAGTTTTTGTAATAGCTTCAGCTACAGATAAATTAGATGGGTACATAGCCAGAA GTAGAAATCAAGTTACTAGATTTGGTAAAATAATGGATCCTCTAGCAGATAAAATGTTAGTAACAGCAGCATTAATATCT TTAGTAGATTTTCAAATAGTACCTGGATGGGCTTGTATAATAATCATAGCCAGAGAATTTGCTGTAACAGGGCTTAGAAG TGTAGCTTCTGCAGAGGGGGTAGTAATTGCTGCTAGTAAATGGGGAAAGGCTAAGACTGTAATACAAATAGTAGCTATAA TATTTGCTCTTGTAAATCTAAATTACCAAGAGGGAATATATATATTAGGAAATTGGGCTGTAAATTATATAAATATTATA GCGAATATAACGAATATTACTATGGCATTGGCTATAATAATAACTATAGTATCTGGTGTAGATTACTTTGTTAAAAATAA AGATGTAATGAGCCATGATAAGTAG
Upstream 100 bases:
>100_bases GAAATTTACTTTGAAAAAGATGAAAACGTAAGAATTGGTGATATAATAAAGGTGAAGGTAACTCATAGTTTAGAATATGA TTTAATAGGAGTTGTTTATA
Downstream 100 bases:
>100_bases GTTTATAAAAAAATATATTGTCAATAATTTAAATAAAAGTTCCTGTAGGGGGCTTTTATTTATATTATATTAAGTTGACC CTAGTAAAAAAATAGTATAT
Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MNLANKLTILRIFLVPIFLIFISVKNIPYGTVIATAVFVIASATDKLDGYIARSRNQVTRFGKIMDPLADKMLVTAALIS LVDFQIVPGWACIIIIAREFAVTGLRSVASAEGVVIAASKWGKAKTVIQIVAIIFALVNLNYQEGIYILGNWAVNYINII ANITNITMALAIIITIVSGVDYFVKNKDVMSHDK
Sequences:
>Translated_194_residues MNLANKLTILRIFLVPIFLIFISVKNIPYGTVIATAVFVIASATDKLDGYIARSRNQVTRFGKIMDPLADKMLVTAALIS LVDFQIVPGWACIIIIAREFAVTGLRSVASAEGVVIAASKWGKAKTVIQIVAIIFALVNLNYQEGIYILGNWAVNYINII ANITNITMALAIIITIVSGVDYFVKNKDVMSHDK >Mature_194_residues MNLANKLTILRIFLVPIFLIFISVKNIPYGTVIATAVFVIASATDKLDGYIARSRNQVTRFGKIMDPLADKMLVTAALIS LVDFQIVPGWACIIIIAREFAVTGLRSVASAEGVVIAASKWGKAKTVIQIVAIIFALVNLNYQEGIYILGNWAVNYINII ANITNITMALAIIITIVSGVDYFVKNKDVMSHDK
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=147, Percent_Identity=36.0544217687075, Blast_Score=82, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 21204; Mature: 21204
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLANKLTILRIFLVPIFLIFISVKNIPYGTVIATAVFVIASATDKLDGYIARSRNQVTR CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGKIMDPLADKMLVTAALISLVDFQIVPGWACIIIIAREFAVTGLRSVASAEGVVIAASK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC WGKAKTVIQIVAIIFALVNLNYQEGIYILGNWAVNYINIIANITNITMALAIIITIVSGV CCCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DYFVKNKDVMSHDK HHHHCCCCCCCCCC >Mature Secondary Structure MNLANKLTILRIFLVPIFLIFISVKNIPYGTVIATAVFVIASATDKLDGYIARSRNQVTR CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGKIMDPLADKMLVTAALISLVDFQIVPGWACIIIIAREFAVTGLRSVASAEGVVIAASK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC WGKAKTVIQIVAIIFALVNLNYQEGIYILGNWAVNYINIIANITNITMALAIIITIVSGV CCCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DYFVKNKDVMSHDK HHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7750561; 9384377 [H]