| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757741
Identifier: 170757741
GI number: 170757741
Start: 2322702
End: 2323112
Strand: Reverse
Name: 170757741
Synonym: CLD_2450
Alternate gene names: NA
Gene position: 2323112-2322702 (Counterclockwise)
Preceding gene: 170756936
Following gene: 170757034
Centisome position: 58.69
GC content: 26.28
Gene sequence:
>411_bases ATGGGAGCTTTATTTAAGAATTCAGATATAACTATTTATAACAAATATTATGATTCTATAAATGATATAGATAAATATCA AAGGACAGTTATAAAAGGTGTTAATTGGCAAGGTAAAAGGAATGGTACTGTTTCAGACAAAGGTTTATTGATTGCAGATA GCACACTTATATTTATAGATAAGTTAGATAATTATGTTAGTCCTAAGAAATTTTTAAAATTATCTAATGAAGAAAGATCT AATTATTTTACTTTTACTCCAGGAGATAAAATTGTAAAAAGTGAGGTCGACTTTGAAATAACAGGAATAAAGCCTTATAG AATAGCTGATTTAGAAGGTGAATTTGACGATGTTATAGATATTAAATCTATAAATATATTAACTGACCATATTGAAGTGG AGGGCGTATAA
Upstream 100 bases:
>100_bases GGAAATCAATCTATATCATTTGAAAGCGGTGCTAGTGCATGGAGCATAACAGAAGATGTTAAAGCCTTATTACCTACGCC CTATGCAAGGATGTGGTAAT
Downstream 100 bases:
>100_bases TGGCCACTACAGTAAGAATCCAAATAGATAAGACAGAAAAAATTTTACTAAAAAGATATTTAAATAAAAATGGTCAAGCG CAGGTTAAGTTTACTAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MGALFKNSDITIYNKYYDSINDIDKYQRTVIKGVNWQGKRNGTVSDKGLLIADSTLIFIDKLDNYVSPKKFLKLSNEERS NYFTFTPGDKIVKSEVDFEITGIKPYRIADLEGEFDDVIDIKSINILTDHIEVEGV
Sequences:
>Translated_136_residues MGALFKNSDITIYNKYYDSINDIDKYQRTVIKGVNWQGKRNGTVSDKGLLIADSTLIFIDKLDNYVSPKKFLKLSNEERS NYFTFTPGDKIVKSEVDFEITGIKPYRIADLEGEFDDVIDIKSINILTDHIEVEGV >Mature_135_residues GALFKNSDITIYNKYYDSINDIDKYQRTVIKGVNWQGKRNGTVSDKGLLIADSTLIFIDKLDNYVSPKKFLKLSNEERSN YFTFTPGDKIVKSEVDFEITGIKPYRIADLEGEFDDVIDIKSINILTDHIEVEGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15552; Mature: 15421
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGALFKNSDITIYNKYYDSINDIDKYQRTVIKGVNWQGKRNGTVSDKGLLIADSTLIFID CCCEECCCCEEEEEHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEEEEEE KLDNYVSPKKFLKLSNEERSNYFTFTPGDKIVKSEVDFEITGIKPYRIADLEGEFDDVID CCCCCCCHHHHEEECCCCCCCEEEECCCCCEEECCCCEEEECCCCEEEEECCCCCCCEEE IKSINILTDHIEVEGV EEEEEEEEEEEEEECC >Mature Secondary Structure GALFKNSDITIYNKYYDSINDIDKYQRTVIKGVNWQGKRNGTVSDKGLLIADSTLIFID CCEECCCCEEEEEHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEEEEEE KLDNYVSPKKFLKLSNEERSNYFTFTPGDKIVKSEVDFEITGIKPYRIADLEGEFDDVID CCCCCCCHHHHEEECCCCCCCEEEECCCCCEEECCCCEEEECCCCEEEEECCCCCCCEEE IKSINILTDHIEVEGV EEEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA