| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757728
Identifier: 170757728
GI number: 170757728
Start: 3429536
End: 3430780
Strand: Reverse
Name: 170757728
Synonym: CLD_1370
Alternate gene names: NA
Gene position: 3430780-3429536 (Counterclockwise)
Preceding gene: 170756704
Following gene: 170754971
Centisome position: 86.67
GC content: 25.78
Gene sequence:
>1245_bases ATGGCTTTTAAAAGCCCTATAATTATAATAGATGATGGAGTAAATAGTGATTTATGTAATTTAGGGGAACTAAAAAGTGA TATTGAAGTTACATCTGATTTGGAAATTAAGGAAAATTTAGATTGTTATAATGAATTTACCTATCACGGGTCTACTTGTG CAGCTATAATAAAAAAGTATTTACCTAATGCAGAATTAGGAAGTATAAAGATTTTAAGTAATTTCAAAGGTACAAGATAT CAACTTGTTAAAGCCATTAAATGGTGTGTTGAAAATAATATCAAACTAATAAACTTAAGTTTAGGAACGGTAAATTTTCA AGATTTTAAATTATTATATAGCTGTATGGAATATGCTTATAAAAAAGGGTTGATTATAATAGCAGCTTATAATAATAAGA GAATATACACGTGTCCAGCTTCTTTTGATAATGTTATAGGAGTAAAATGTGATACAACAGGAACACTAAAAAGGTCTGAA TATATTTATAATACCTATTCTCTTGATGGTATTGAAGTAATAGCTAATGCAAAACATAATATAATTGATAATAGCGGAAT GGTTTATACTACTTCAATCTGCAATAGCTATGCTACTCCAGTTGTCACTGCTTTAGTTTATGAACTTATTGAGAAATATC CAGATATAACTATAAATGAAATAAAAACATATCTAAGGAATAGATCAGTTAATAACAATAATTCAATTGATTTAATTAAG AGGAACCATAAGATACAAAAAAATGTAGATGTTCCAGTAATGATTTTTTATGATTTTACTGGATACTATGGTGCTACTAT CTCAAAGCTTTTCTGTGAATTATTTAGGGCAAATGGGTATTATGCTATTGCGATAGTTGATTCTATATTAAAAAGCAGTA AACATGAGGGCATTATTTCGTTCAGAGAGAACTATAATAATATAGAAGGTATAAATAGTACAGTATTGAAAGACGTATAT AGTGTCTTTAATTGTGATATTTTAATATCTTGTATAGATAAAACTAATTTGCAGAAAGAATTGGTTGAAAATTTAAATAG TTTTACGGATATGGAAGTAGATATAAAGATATTAATTATTAAAAATTTTACTATTGATATAAAAAATATAATTGAAAAAA ATTCAGAAAGTGAGATATTAATTTTTTGTTATACAGAGAATGTTCAAGCAGTAAAAGAGAAAAGTTATAGAGTGTTTTAT GATGTTTATGAATTATTTATGCATGTGCTAAGGATTTTAACGTAA
Upstream 100 bases:
>100_bases TACCACAAGAGTATGTAGTTGAAAATAGATTTAATACAATTAATGACATAAAAGAAATTATAATTATTCAGTTAGGACAG GAAGAGGCAATTATTTCTTA
Downstream 100 bases:
>100_bases TAGTAATAAAATAAAAAATCAGCAAGAATTAAGAAAAAATGTTCATCTTTCTTTAGATATTGGATATTTATTTGCAGAAA TATTAAGGTTTTTCATGGAA
Product: S8/S53 family peptidase
Products: NA
Alternate protein names: Subtilisin; Peptidase S8 And S; S8/S53 Family Peptidase; Peptidase S8 And; Peptidase Family S8/S; Subtilisin-Like Serine Protease; Peptidase Families S8 And; Extracellular Serine Protease
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MAFKSPIIIIDDGVNSDLCNLGELKSDIEVTSDLEIKENLDCYNEFTYHGSTCAAIIKKYLPNAELGSIKILSNFKGTRY QLVKAIKWCVENNIKLINLSLGTVNFQDFKLLYSCMEYAYKKGLIIIAAYNNKRIYTCPASFDNVIGVKCDTTGTLKRSE YIYNTYSLDGIEVIANAKHNIIDNSGMVYTTSICNSYATPVVTALVYELIEKYPDITINEIKTYLRNRSVNNNNSIDLIK RNHKIQKNVDVPVMIFYDFTGYYGATISKLFCELFRANGYYAIAIVDSILKSSKHEGIISFRENYNNIEGINSTVLKDVY SVFNCDILISCIDKTNLQKELVENLNSFTDMEVDIKILIIKNFTIDIKNIIEKNSESEILIFCYTENVQAVKEKSYRVFY DVYELFMHVLRILT
Sequences:
>Translated_414_residues MAFKSPIIIIDDGVNSDLCNLGELKSDIEVTSDLEIKENLDCYNEFTYHGSTCAAIIKKYLPNAELGSIKILSNFKGTRY QLVKAIKWCVENNIKLINLSLGTVNFQDFKLLYSCMEYAYKKGLIIIAAYNNKRIYTCPASFDNVIGVKCDTTGTLKRSE YIYNTYSLDGIEVIANAKHNIIDNSGMVYTTSICNSYATPVVTALVYELIEKYPDITINEIKTYLRNRSVNNNNSIDLIK RNHKIQKNVDVPVMIFYDFTGYYGATISKLFCELFRANGYYAIAIVDSILKSSKHEGIISFRENYNNIEGINSTVLKDVY SVFNCDILISCIDKTNLQKELVENLNSFTDMEVDIKILIIKNFTIDIKNIIEKNSESEILIFCYTENVQAVKEKSYRVFY DVYELFMHVLRILT >Mature_413_residues AFKSPIIIIDDGVNSDLCNLGELKSDIEVTSDLEIKENLDCYNEFTYHGSTCAAIIKKYLPNAELGSIKILSNFKGTRYQ LVKAIKWCVENNIKLINLSLGTVNFQDFKLLYSCMEYAYKKGLIIIAAYNNKRIYTCPASFDNVIGVKCDTTGTLKRSEY IYNTYSLDGIEVIANAKHNIIDNSGMVYTTSICNSYATPVVTALVYELIEKYPDITINEIKTYLRNRSVNNNNSIDLIKR NHKIQKNVDVPVMIFYDFTGYYGATISKLFCELFRANGYYAIAIVDSILKSSKHEGIISFRENYNNIEGINSTVLKDVYS VFNCDILISCIDKTNLQKELVENLNSFTDMEVDIKILIIKNFTIDIKNIIEKNSESEILIFCYTENVQAVKEKSYRVFYD VYELFMHVLRILT
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47362; Mature: 47231
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFKSPIIIIDDGVNSDLCNLGELKSDIEVTSDLEIKENLDCYNEFTYHGSTCAAIIKKY CCCCCCEEEEECCCCCCHHCHHHHHCCCEECCCCCHHHCCCHHHHCCCCCHHHHHHHHHH LPNAELGSIKILSNFKGTRYQLVKAIKWCVENNIKLINLSLGTVNFQDFKLLYSCMEYAY CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHH KKGLIIIAAYNNKRIYTCPASFDNVIGVKCDTTGTLKRSEYIYNTYSLDGIEVIANAKHN HCCEEEEEEECCCEEEECCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCEEECCCCC IIDNSGMVYTTSICNSYATPVVTALVYELIEKYPDITINEIKTYLRNRSVNNNNSIDLIK EECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEEEEE RNHKIQKNVDVPVMIFYDFTGYYGATISKLFCELFRANGYYAIAIVDSILKSSKHEGIIS CCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCCEEE FRENYNNIEGINSTVLKDVYSVFNCDILISCIDKTNLQKELVENLNSFTDMEVDIKILII EHHCCCCCCCCHHHHHHHHHHHHCCHHEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEEE KNFTIDIKNIIEKNSESEILIFCYTENVQAVKEKSYRVFYDVYELFMHVLRILT ECCEEEHHHHHCCCCCCCEEEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHC >Mature Secondary Structure AFKSPIIIIDDGVNSDLCNLGELKSDIEVTSDLEIKENLDCYNEFTYHGSTCAAIIKKY CCCCCEEEEECCCCCCHHCHHHHHCCCEECCCCCHHHCCCHHHHCCCCCHHHHHHHHHH LPNAELGSIKILSNFKGTRYQLVKAIKWCVENNIKLINLSLGTVNFQDFKLLYSCMEYAY CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHH KKGLIIIAAYNNKRIYTCPASFDNVIGVKCDTTGTLKRSEYIYNTYSLDGIEVIANAKHN HCCEEEEEEECCCEEEECCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCEEECCCCC IIDNSGMVYTTSICNSYATPVVTALVYELIEKYPDITINEIKTYLRNRSVNNNNSIDLIK EECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEEEEE RNHKIQKNVDVPVMIFYDFTGYYGATISKLFCELFRANGYYAIAIVDSILKSSKHEGIIS CCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCCEEE FRENYNNIEGINSTVLKDVYSVFNCDILISCIDKTNLQKELVENLNSFTDMEVDIKILII EHHCCCCCCCCHHHHHHHHHHHHCCHHEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEEE KNFTIDIKNIIEKNSESEILIFCYTENVQAVKEKSYRVFYDVYELFMHVLRILT ECCEEEHHHHHCCCCCCCEEEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA