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The map label for this gene is yfmM [H]

Identifier: 170757680

GI number: 170757680

Start: 852193

End: 853746

Strand: Direct

Name: yfmM [H]

Synonym: CLD_0032

Alternate gene names: 170757680

Gene position: 852193-853746 (Clockwise)

Preceding gene: 170755488

Following gene: 170756888

Centisome position: 21.53

GC content: 29.02

Gene sequence:

>1554_bases
ATGAGCATTTTAACAGTTGAAGACATGAGTCATTCATTTGGAGATAGAATATTATTTAAAAATGTATCCTTTAGATTATT
AAAAGGAGAGCATATTGGTCTTGTTGGAGCTAATGGTGAAGGTAAGTCGACCTTTATGAAAATTATTACAAATGAAATTT
TAGTTGATGAAGGAACTATTGATTGGAATAGTAAATTTAGCATTGGATATATGGATCAATTGGTTGAATTAAAAGAAGGA
ATTACTGTATTCAATTTTTTAAAAAAGGCATTTATAAAGTTATTTGATATAGAGAATAAAATTAATGATTTATATAATAA
TCTTGGCAATATGGATAAAGCGAGAATGGATAAAACGTTAAACCAAATTGCAACCATGCAGGAGATTTTAGATAAGAATG
ATTTTTACAGTATTAACTCTAAAATACAAGCAACTGTAGTTGGACTTGGGATTAAAGGGCTTTTAGATAGGGATGTTTCA
GCTTTAAGTGGAGGACAAAGAACTAAAATTTTACTTGCAAAACTACTTCTAGAGAAACCAGATATTTTACTACTAGATGA
GCCAACTAACTATTTAGATGAAGAACACATAGAATGGCTTAAAAGTTATTTAATAAATTATGAAGGTGCATTTATATTAA
TATCACATGATAATAGTTTTTTAAATAGTGTAGTAAATGTGATTTATCATCTTGAGCACAAAACCTTAACAAGATATGCA
GGAAACTATGATTATTTTCTTAAGATTTATGAAGTACGAAAAGAGCAGAGGTTAATTCAATATAAAGAGCAGCAAAACGA
GATTGCAAAGCTTGAAGATTATATAAGAAAAAATAAGGCAAGAGCTTCGACTGCAAAACAAGCTAAATCAAGAGAAAAAA
AGCTTGATAAAATTGAAAAAATAGAAATCAAAAAAGAAATCATAAAACCATATTTTAATTTTAAAAGTGTGAGAATGCCA
GAAAATATAATTTTCAATGCCAGTAATTTAATTATTGGGTATAATAAACCATTAAGCAAACCTCTAAATTTAAAAATGAA
AAGAGGACAAAAAATTGCAATAACAGGTGCTAATGGAATAGGTAAAACTACTTTAATAAAAACTTTACTTGGACTTTTAA
AACCTATAAATGGTGAGGTGACTTTAAGCGATTATAAAAAGATAGGATATTTTGAACAGGAAATTATAGAAGATAATGCC
GGCTCAGTTTTATATGATGTTTGGAATGAGTTCCCTGATCTAACTCAAACAGAAGTAAGGAGTAGTCTTGCTAAATGTGG
GTTAACAAGGCAGCATATAGATAGCCCTATTAATATATTAAGTGGAGGAGAACAGGCTAAGGTTAGACTGTGTAAGTTAA
TCAATGAACCTAGCAATGTATTAGTCTTAGATGAACCTACAAATCACTTAGATATTTATGCAAAAAATGAGCTTAAGCAT
GCTTTAAAAGAGTATGATGGTAGCATAATTCTAGTATGCCATGAGCCAGAGTTTTATAAAGATATTGCAACGGATATATG
GAATTGTGAAGATTGGAGATATTGTAGTGTGTAA

Upstream 100 bases:

>100_bases
ACCTCCTGTGATCATAAACAGTACAGATTTATTTATGAACTTGGACTTGAGCCTTTGTGGTGTTATCATTCAATTAGAGG
ATACAAGGAGGTGCAGAGTT

Downstream 100 bases:

>100_bases
TATAAAAAGTGATGAGGAGCTATCCAAGCAATGGAGGCTCCTCTTTCTCTATATTGGGGATTATGGGTTTTATATTTATT
TACTGAAATTTGTTGCTATT

Product: ABC transporter, ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 516

Protein sequence:

>517_residues
MSILTVEDMSHSFGDRILFKNVSFRLLKGEHIGLVGANGEGKSTFMKIITNEILVDEGTIDWNSKFSIGYMDQLVELKEG
ITVFNFLKKAFIKLFDIENKINDLYNNLGNMDKARMDKTLNQIATMQEILDKNDFYSINSKIQATVVGLGIKGLLDRDVS
ALSGGQRTKILLAKLLLEKPDILLLDEPTNYLDEEHIEWLKSYLINYEGAFILISHDNSFLNSVVNVIYHLEHKTLTRYA
GNYDYFLKIYEVRKEQRLIQYKEQQNEIAKLEDYIRKNKARASTAKQAKSREKKLDKIEKIEIKKEIIKPYFNFKSVRMP
ENIIFNASNLIIGYNKPLSKPLNLKMKRGQKIAITGANGIGKTTLIKTLLGLLKPINGEVTLSDYKKIGYFEQEIIEDNA
GSVLYDVWNEFPDLTQTEVRSSLAKCGLTRQHIDSPINILSGGEQAKVRLCKLINEPSNVLVLDEPTNHLDIYAKNELKH
ALKEYDGSIILVCHEPEFYKDIATDIWNCEDWRYCSV

Sequences:

>Translated_517_residues
MSILTVEDMSHSFGDRILFKNVSFRLLKGEHIGLVGANGEGKSTFMKIITNEILVDEGTIDWNSKFSIGYMDQLVELKEG
ITVFNFLKKAFIKLFDIENKINDLYNNLGNMDKARMDKTLNQIATMQEILDKNDFYSINSKIQATVVGLGIKGLLDRDVS
ALSGGQRTKILLAKLLLEKPDILLLDEPTNYLDEEHIEWLKSYLINYEGAFILISHDNSFLNSVVNVIYHLEHKTLTRYA
GNYDYFLKIYEVRKEQRLIQYKEQQNEIAKLEDYIRKNKARASTAKQAKSREKKLDKIEKIEIKKEIIKPYFNFKSVRMP
ENIIFNASNLIIGYNKPLSKPLNLKMKRGQKIAITGANGIGKTTLIKTLLGLLKPINGEVTLSDYKKIGYFEQEIIEDNA
GSVLYDVWNEFPDLTQTEVRSSLAKCGLTRQHIDSPINILSGGEQAKVRLCKLINEPSNVLVLDEPTNHLDIYAKNELKH
ALKEYDGSIILVCHEPEFYKDIATDIWNCEDWRYCSV
>Mature_516_residues
SILTVEDMSHSFGDRILFKNVSFRLLKGEHIGLVGANGEGKSTFMKIITNEILVDEGTIDWNSKFSIGYMDQLVELKEGI
TVFNFLKKAFIKLFDIENKINDLYNNLGNMDKARMDKTLNQIATMQEILDKNDFYSINSKIQATVVGLGIKGLLDRDVSA
LSGGQRTKILLAKLLLEKPDILLLDEPTNYLDEEHIEWLKSYLINYEGAFILISHDNSFLNSVVNVIYHLEHKTLTRYAG
NYDYFLKIYEVRKEQRLIQYKEQQNEIAKLEDYIRKNKARASTAKQAKSREKKLDKIEKIEIKKEIIKPYFNFKSVRMPE
NIIFNASNLIIGYNKPLSKPLNLKMKRGQKIAITGANGIGKTTLIKTLLGLLKPINGEVTLSDYKKIGYFEQEIIEDNAG
SVLYDVWNEFPDLTQTEVRSSLAKCGLTRQHIDSPINILSGGEQAKVRLCKLINEPSNVLVLDEPTNHLDIYAKNELKHA
LKEYDGSIILVCHEPEFYKDIATDIWNCEDWRYCSV

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=516, Percent_Identity=28.1007751937984, Blast_Score=217, Evalue=3e-56,
Organism=Homo sapiens, GI27881506, Length=516, Percent_Identity=29.2635658914729, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI10947137, Length=516, Percent_Identity=29.2635658914729, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI10947135, Length=531, Percent_Identity=29.9435028248588, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI69354671, Length=531, Percent_Identity=29.9435028248588, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI108773784, Length=213, Percent_Identity=31.4553990610329, Blast_Score=69, Evalue=8e-12,
Organism=Homo sapiens, GI108773782, Length=213, Percent_Identity=31.4553990610329, Blast_Score=69, Evalue=8e-12,
Organism=Escherichia coli, GI1789751, Length=507, Percent_Identity=33.3333333333333, Blast_Score=272, Evalue=4e-74,
Organism=Escherichia coli, GI1787041, Length=513, Percent_Identity=33.5282651072125, Blast_Score=269, Evalue=3e-73,
Organism=Escherichia coli, GI1787182, Length=519, Percent_Identity=30.8285163776493, Blast_Score=229, Evalue=2e-61,
Organism=Escherichia coli, GI2367384, Length=506, Percent_Identity=30.2371541501976, Blast_Score=223, Evalue=3e-59,
Organism=Escherichia coli, GI1788165, Length=285, Percent_Identity=24.9122807017544, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI1787758, Length=170, Percent_Identity=26.4705882352941, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1788225, Length=193, Percent_Identity=26.4248704663212, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1788897, Length=198, Percent_Identity=27.2727272727273, Blast_Score=62, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=520, Percent_Identity=29.8076923076923, Blast_Score=220, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI17553372, Length=521, Percent_Identity=29.9424184261036, Blast_Score=206, Evalue=3e-53,
Organism=Caenorhabditis elegans, GI17559834, Length=538, Percent_Identity=28.0669144981413, Blast_Score=194, Evalue=1e-49,
Organism=Saccharomyces cerevisiae, GI6320874, Length=512, Percent_Identity=30.859375, Blast_Score=213, Evalue=8e-56,
Organism=Saccharomyces cerevisiae, GI6321121, Length=521, Percent_Identity=30.5182341650672, Blast_Score=206, Evalue=1e-53,
Organism=Saccharomyces cerevisiae, GI6325030, Length=391, Percent_Identity=28.3887468030691, Blast_Score=132, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6324314, Length=389, Percent_Identity=25.706940874036, Blast_Score=125, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6323278, Length=387, Percent_Identity=27.390180878553, Blast_Score=122, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24666836, Length=519, Percent_Identity=31.7919075144509, Blast_Score=235, Evalue=6e-62,
Organism=Drosophila melanogaster, GI24641342, Length=529, Percent_Identity=29.6786389413989, Blast_Score=219, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24642252, Length=519, Percent_Identity=30.4431599229287, Blast_Score=211, Evalue=1e-54,
Organism=Drosophila melanogaster, GI18859989, Length=519, Percent_Identity=30.4431599229287, Blast_Score=211, Evalue=1e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 59271; Mature: 59140

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSILTVEDMSHSFGDRILFKNVSFRLLKGEHIGLVGANGEGKSTFMKIITNEILVDEGTI
CCEEEECHHHHHHCCEEEEECCCEEEEECCEEEEEECCCCCHHHHHHHHHHHHEEECCCC
DWNSKFSIGYMDQLVELKEGITVFNFLKKAFIKLFDIENKINDLYNNLGNMDKARMDKTL
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
NQIATMQEILDKNDFYSINSKIQATVVGLGIKGLLDRDVSALSGGQRTKILLAKLLLEKP
HHHHHHHHHHCCCCCEEECCEEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
DILLLDEPTNYLDEEHIEWLKSYLINYEGAFILISHDNSFLNSVVNVIYHLEHKTLTRYA
CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHC
GNYDYFLKIYEVRKEQRLIQYKEQQNEIAKLEDYIRKNKARASTAKQAKSREKKLDKIEK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEIKKEIIKPYFNFKSVRMPENIIFNASNLIIGYNKPLSKPLNLKMKRGQKIAITGANGI
HHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEECCCCCCCCCCCEECCCCEEEEECCCCC
GKTTLIKTLLGLLKPINGEVTLSDYKKIGYFEQEIIEDNAGSVLYDVWNEFPDLTQTEVR
CHHHHHHHHHHHHCCCCCCEEEHHHHHCCHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHH
SSLAKCGLTRQHIDSPINILSGGEQAKVRLCKLINEPSNVLVLDEPTNHLDIYAKNELKH
HHHHHCCCCHHHCCCCHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEHHHHHH
ALKEYDGSIILVCHEPEFYKDIATDIWNCEDWRYCSV
HHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCEEECC
>Mature Secondary Structure 
SILTVEDMSHSFGDRILFKNVSFRLLKGEHIGLVGANGEGKSTFMKIITNEILVDEGTI
CEEEECHHHHHHCCEEEEECCCEEEEECCEEEEEECCCCCHHHHHHHHHHHHEEECCCC
DWNSKFSIGYMDQLVELKEGITVFNFLKKAFIKLFDIENKINDLYNNLGNMDKARMDKTL
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
NQIATMQEILDKNDFYSINSKIQATVVGLGIKGLLDRDVSALSGGQRTKILLAKLLLEKP
HHHHHHHHHHCCCCCEEECCEEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
DILLLDEPTNYLDEEHIEWLKSYLINYEGAFILISHDNSFLNSVVNVIYHLEHKTLTRYA
CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHC
GNYDYFLKIYEVRKEQRLIQYKEQQNEIAKLEDYIRKNKARASTAKQAKSREKKLDKIEK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEIKKEIIKPYFNFKSVRMPENIIFNASNLIIGYNKPLSKPLNLKMKRGQKIAITGANGI
HHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEECCCCCCCCCCCEECCCCEEEEECCCCC
GKTTLIKTLLGLLKPINGEVTLSDYKKIGYFEQEIIEDNAGSVLYDVWNEFPDLTQTEVR
CHHHHHHHHHHHHCCCCCCEEEHHHHHCCHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHH
SSLAKCGLTRQHIDSPINILSGGEQAKVRLCKLINEPSNVLVLDEPTNHLDIYAKNELKH
HHHHHCCCCHHHCCCCHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEHHHHHH
ALKEYDGSIILVCHEPEFYKDIATDIWNCEDWRYCSV
HHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]