Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170757635

Identifier: 170757635

GI number: 170757635

Start: 43937

End: 44725

Strand: Direct

Name: 170757635

Synonym: CLD_0778

Alternate gene names: NA

Gene position: 43937-44725 (Clockwise)

Preceding gene: 170756580

Following gene: 170754960

Centisome position: 1.11

GC content: 25.35

Gene sequence:

>789_bases
ATGAATGGCATACTATTTTACTTTAGTGGAACAGGTAATACCAAATGGGTAGCAGATAGAATAGAAGATAAATTGTGTAA
ATTAGATAATACTATACATAAAGTTAATATAGAGAATCTTGATGATGATGTATTAATTAAAATTCATAATTATGATTTTA
TAATAATAGGAACACCTATTTATGCTGAGATGGGTCCAAAATTAATACAGGATTTTGTTAATAATATTCCTAAAGTAAAA
GAAAAAATTAAATGTATACTATATTCAACTCAAGGAGGCAATTCAGGTTGTGAAACAGAGAGTATGCATAAAATCTTATG
TAATAAAGGTTATGATGTAGTTATAAAGGTTAATATAAAAATGATAAATAATTATTATTTTTCTGTAGGGAAAAAGCCAG
ATGAAGCTGAGATGGCAAATATACTAAGGGATGCAGAAAAAAAGGTGGATTTAGTTGTAGATAAATTTTCAAAAGGAGAA
GTATATTTAGAAAATATAAATAAAACTAGATTATTTTTGGGGAAAATTGCATCTAAGGGATTTAATAAATTTCTTCCTAA
ATTATCAAACAATCTTAAATCTACAGAGCATTGTATTAAATGTGGTATGTGTGTTAGGAATTGTCCAAAAGGAAATATAG
TATTTGAGAACGGGGGAGTAGTTTTTCATAGTAATTGTATATTATGTTTAAGATGTATATATATATGTCCAAGCAATGCA
ATAGTTTATAAAGAAAAGAGAATAGATCAAATAGAAAAAAATATAATAAAATTATTGGACATAAAATAG

Upstream 100 bases:

>100_bases
GAAAGTTTTAATATTTTTGTAAATATATTTAATATATATAATGCTATTATAAAGTAATGTAGGTATATATTTAGAAAGGT
ATTACGATGGGAGGGTTAAT

Downstream 100 bases:

>100_bases
GAGGAAAAGTATTATAATATGAATATAAATAATGATAATTGTAGTAAATGTATAAATATATTAAAAAGTAATTGTAATGG
TAATTTAGAAAATTGTATTT

Product: iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MNGILFYFSGTGNTKWVADRIEDKLCKLDNTIHKVNIENLDDDVLIKIHNYDFIIIGTPIYAEMGPKLIQDFVNNIPKVK
EKIKCILYSTQGGNSGCETESMHKILCNKGYDVVIKVNIKMINNYYFSVGKKPDEAEMANILRDAEKKVDLVVDKFSKGE
VYLENINKTRLFLGKIASKGFNKFLPKLSNNLKSTEHCIKCGMCVRNCPKGNIVFENGGVVFHSNCILCLRCIYICPSNA
IVYKEKRIDQIEKNIIKLLDIK

Sequences:

>Translated_262_residues
MNGILFYFSGTGNTKWVADRIEDKLCKLDNTIHKVNIENLDDDVLIKIHNYDFIIIGTPIYAEMGPKLIQDFVNNIPKVK
EKIKCILYSTQGGNSGCETESMHKILCNKGYDVVIKVNIKMINNYYFSVGKKPDEAEMANILRDAEKKVDLVVDKFSKGE
VYLENINKTRLFLGKIASKGFNKFLPKLSNNLKSTEHCIKCGMCVRNCPKGNIVFENGGVVFHSNCILCLRCIYICPSNA
IVYKEKRIDQIEKNIIKLLDIK
>Mature_262_residues
MNGILFYFSGTGNTKWVADRIEDKLCKLDNTIHKVNIENLDDDVLIKIHNYDFIIIGTPIYAEMGPKLIQDFVNNIPKVK
EKIKCILYSTQGGNSGCETESMHKILCNKGYDVVIKVNIKMINNYYFSVGKKPDEAEMANILRDAEKKVDLVVDKFSKGE
VYLENINKTRLFLGKIASKGFNKFLPKLSNNLKSTEHCIKCGMCVRNCPKGNIVFENGGVVFHSNCILCLRCIYICPSNA
IVYKEKRIDQIEKNIIKLLDIK

Specific function: Unknown

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29815; Mature: 29815

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: PS00198 4FE4S_FERREDOXIN ; PS00201 FLAVODOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGILFYFSGTGNTKWVADRIEDKLCKLDNTIHKVNIENLDDDVLIKIHNYDFIIIGTPI
CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCEEEECCCH
YAEMGPKLIQDFVNNIPKVKEKIKCILYSTQGGNSGCETESMHKILCNKGYDVVIKVNIK
HHHCCHHHHHHHHHCCHHHHHHEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEEEE
MINNYYFSVGKKPDEAEMANILRDAEKKVDLVVDKFSKGEVYLENINKTRLFLGKIASKG
EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCEEEECCCHHHHHHHHHHHHH
FNKFLPKLSNNLKSTEHCIKCGMCVRNCPKGNIVFENGGVVFHSNCILCLRCIYICPSNA
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEECCCEEEECCHHHHHHHHHHCCCCC
IVYKEKRIDQIEKNIIKLLDIK
EEEHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNGILFYFSGTGNTKWVADRIEDKLCKLDNTIHKVNIENLDDDVLIKIHNYDFIIIGTPI
CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCEEEECCCH
YAEMGPKLIQDFVNNIPKVKEKIKCILYSTQGGNSGCETESMHKILCNKGYDVVIKVNIK
HHHCCHHHHHHHHHCCHHHHHHEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEEEE
MINNYYFSVGKKPDEAEMANILRDAEKKVDLVVDKFSKGEVYLENINKTRLFLGKIASKG
EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCEEEECCCHHHHHHHHHHHHH
FNKFLPKLSNNLKSTEHCIKCGMCVRNCPKGNIVFENGGVVFHSNCILCLRCIYICPSNA
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEECCCEEEECCHHHHHHHHHHCCCCC
IVYKEKRIDQIEKNIIKLLDIK
EEEHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA