| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757633
Identifier: 170757633
GI number: 170757633
Start: 3090013
End: 3090459
Strand: Reverse
Name: 170757633
Synonym: CLD_1682
Alternate gene names: NA
Gene position: 3090459-3090013 (Counterclockwise)
Preceding gene: 170755111
Following gene: 170757395
Centisome position: 78.08
GC content: 25.06
Gene sequence:
>447_bases ATGTTAGATAAAGAGAAAGCAAAATCTTCTGAAGAAGTAGTAGAAAATATAGAAAAAGAAAAGGATGAAGAAAAAGTTCA AGAAGTTAATAAGGAAAAAGCATCAGAAAATGAAACAGATAAAATTAATGAGTTTGTAGAAGAAGAAAAATCCCCAAAAA ATAAAGAAGAAATTAATAAATCTGCTGAAGAAGAAACCAATACAGAAAGCAATAATAATGATTTAAAGAACAAAGTTAGT TTTTTACAATGTTTTAAAGAAGGAATAAAAGGCACTTTAGGAATCTTTGTAGTATCTATAGGATTTTTAGCAGTAGTAGG GCTAGTTTTAAGATATATATTAGGATTCTATGTAAAGGATGTTTGGGGTATGCTATTTATAGTATATTTAGTAGTATCTT TATTCTATCCATACATAAAAGCTAAATTTTATAAAAAAAATAAATAG
Upstream 100 bases:
>100_bases TAAAAACATATAATTTATAAGGATATAATATATTTACATAGGATGGATACTATAGCATAATATAATTTGACATAGATGAA AAATGTGAGGAGGAATATAG
Downstream 100 bases:
>100_bases AATGGATAAATAATTAAGAGTATCTATAAAGGGGCTCTTAATTATTGTTTTTAATATGAAAAATGAAGTTATTCTTAATT TTATATTAAGTCTACTTAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MLDKEKAKSSEEVVENIEKEKDEEKVQEVNKEKASENETDKINEFVEEEKSPKNKEEINKSAEEETNTESNNNDLKNKVS FLQCFKEGIKGTLGIFVVSIGFLAVVGLVLRYILGFYVKDVWGMLFIVYLVVSLFYPYIKAKFYKKNK
Sequences:
>Translated_148_residues MLDKEKAKSSEEVVENIEKEKDEEKVQEVNKEKASENETDKINEFVEEEKSPKNKEEINKSAEEETNTESNNNDLKNKVS FLQCFKEGIKGTLGIFVVSIGFLAVVGLVLRYILGFYVKDVWGMLFIVYLVVSLFYPYIKAKFYKKNK >Mature_148_residues MLDKEKAKSSEEVVENIEKEKDEEKVQEVNKEKASENETDKINEFVEEEKSPKNKEEINKSAEEETNTESNNNDLKNKVS FLQCFKEGIKGTLGIFVVSIGFLAVVGLVLRYILGFYVKDVWGMLFIVYLVVSLFYPYIKAKFYKKNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17135; Mature: 17135
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDKEKAKSSEEVVENIEKEKDEEKVQEVNKEKASENETDKINEFVEEEKSPKNKEEINK CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHH SAEEETNTESNNNDLKNKVSFLQCFKEGIKGTLGIFVVSIGFLAVVGLVLRYILGFYVKD HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VWGMLFIVYLVVSLFYPYIKAKFYKKNK HHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLDKEKAKSSEEVVENIEKEKDEEKVQEVNKEKASENETDKINEFVEEEKSPKNKEEINK CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHH SAEEETNTESNNNDLKNKVSFLQCFKEGIKGTLGIFVVSIGFLAVVGLVLRYILGFYVKD HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VWGMLFIVYLVVSLFYPYIKAKFYKKNK HHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA