| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is 170757623
Identifier: 170757623
GI number: 170757623
Start: 664299
End: 664994
Strand: Direct
Name: 170757623
Synonym: CLD_0208
Alternate gene names: NA
Gene position: 664299-664994 (Clockwise)
Preceding gene: 170756591
Following gene: 170754585
Centisome position: 16.78
GC content: 24.14
Gene sequence:
>696_bases ATGTTAGAAACTACTTATGTTAATTCGCATAAAGTTTTAAAATTAGTTTTAAGAGTGCTAATAGATTTAATTTCAAAGGG GTTAGCGATAATATTTATCCTAAAGATAATAAGAGCAGATATTGAACCTAGTTTTAAGATAAAGTATATTGAAAAATTTA ATTTTAAAATATTATTATGCACAGCTTTTTTTATATTAGGATTTTTTATATGGTTTAAAAATTCAATTGGTATAATGCTA ACAAAAGTCCTAGTATCTAAAGAGACTATAGAGGCATTTGCAGAATTGGGACAAAATCCTTATCAAATATTTATTTTACA GATAATAATAGCACCTATTTTTGAAGAAATAGTTTTAAGAGGAATTATTTTAGAAGGGTTTTTAAATAAGTATAAGCCAA TAACTGGTATAATTCTTTCATCAGTTATATTTGGATTATGGCATGGAAACATTCATCAATTCATTAATGCCACAATTTTC GGAATGCTTGTTGGGATAATATATTATAAAACAAGATCTTTAGTATTATGTATGGTTTCCCATATATTAAGTAATGGATT CACTTTTTTATATATTACTTCTAATATTAGAAATTTTTTTATAGGGGTAGTAATTTTTATAATATCAGGAATCTTGCTTG AAAAATATATTAGAGAATTGAAATATGATGGTACTAATATAAGTAGTACAGGGTAA
Upstream 100 bases:
>100_bases AAGTAACTGAGAGTAATTTTGAATTGTCTGTGTTAGGTGCTTTGGCAATAATGATGTTTACTATTGTAGCAGTTAATTTT TTCCTATTCATTGTAATATG
Downstream 100 bases:
>100_bases GAAGATTATAATGTTTATAAGTAGAAAGTTAAAAAATGAATAAATGGAAAACTATAGGGATATAGCAGTTAAGCATACAA TAATTAATTTAAAATATGTA
Product: CAAX amino terminal protease family protein
Products: NA
Alternate protein names: Abortive Infection Protein; Caax Amino Protease Family Protein; Membrane-Associated Protease
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MLETTYVNSHKVLKLVLRVLIDLISKGLAIIFILKIIRADIEPSFKIKYIEKFNFKILLCTAFFILGFFIWFKNSIGIML TKVLVSKETIEAFAELGQNPYQIFILQIIIAPIFEEIVLRGIILEGFLNKYKPITGIILSSVIFGLWHGNIHQFINATIF GMLVGIIYYKTRSLVLCMVSHILSNGFTFLYITSNIRNFFIGVVIFIISGILLEKYIRELKYDGTNISSTG
Sequences:
>Translated_231_residues MLETTYVNSHKVLKLVLRVLIDLISKGLAIIFILKIIRADIEPSFKIKYIEKFNFKILLCTAFFILGFFIWFKNSIGIML TKVLVSKETIEAFAELGQNPYQIFILQIIIAPIFEEIVLRGIILEGFLNKYKPITGIILSSVIFGLWHGNIHQFINATIF GMLVGIIYYKTRSLVLCMVSHILSNGFTFLYITSNIRNFFIGVVIFIISGILLEKYIRELKYDGTNISSTG >Mature_231_residues MLETTYVNSHKVLKLVLRVLIDLISKGLAIIFILKIIRADIEPSFKIKYIEKFNFKILLCTAFFILGFFIWFKNSIGIML TKVLVSKETIEAFAELGQNPYQIFILQIIIAPIFEEIVLRGIILEGFLNKYKPITGIILSSVIFGLWHGNIHQFINATIF GMLVGIIYYKTRSLVLCMVSHILSNGFTFLYITSNIRNFFIGVVIFIISGILLEKYIRELKYDGTNISSTG
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26418; Mature: 26418
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLETTYVNSHKVLKLVLRVLIDLISKGLAIIFILKIIRADIEPSFKIKYIEKFNFKILLC CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHCCCHHHHH TAFFILGFFIWFKNSIGIMLTKVLVSKETIEAFAELGQNPYQIFILQIIIAPIFEEIVLR HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH GIILEGFLNKYKPITGIILSSVIFGLWHGNIHQFINATIFGMLVGIIYYKTRSLVLCMVS HHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HILSNGFTFLYITSNIRNFFIGVVIFIISGILLEKYIRELKYDGTNISSTG HHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MLETTYVNSHKVLKLVLRVLIDLISKGLAIIFILKIIRADIEPSFKIKYIEKFNFKILLC CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHCCCHHHHH TAFFILGFFIWFKNSIGIMLTKVLVSKETIEAFAELGQNPYQIFILQIIIAPIFEEIVLR HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH GIILEGFLNKYKPITGIILSSVIFGLWHGNIHQFINATIFGMLVGIIYYKTRSLVLCMVS HHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HILSNGFTFLYITSNIRNFFIGVVIFIISGILLEKYIRELKYDGTNISSTG HHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA