| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757585
Identifier: 170757585
GI number: 170757585
Start: 2199234
End: 2199647
Strand: Reverse
Name: 170757585
Synonym: CLD_2578
Alternate gene names: NA
Gene position: 2199647-2199234 (Counterclockwise)
Preceding gene: 170756129
Following gene: 170756541
Centisome position: 55.57
GC content: 32.13
Gene sequence:
>414_bases TTGTCAATTACCTCCTTATTTTCGATAGCTTTAGACTCGAAAGTTGATTCCTCCTCAGGGATCGCTTCTGCTTTGTCAAT TACTTCCTTATTCTCAATAGCTTTAGACTCGAAAGTTGATTCCTCCTCAGGGATTGCTTCTATTTTGTTAATTATTTCCT TATCCTCAATAGCTTTCGCATTCTCAATAGCTTTAGACTTGAAAGTTGATTCCTCCTCAGGGATCGCTTCTGCTTCGTCA ATTATTTCCTTATTCTCAATAGCTGTTGCCTTTTTATTTACACGCTTAACTAAATTCTTAAAAAATATTTCCACAATATC ATTCCTTTCAATGAAAATTTCAGAATTATATTATTATTATATATTAACTAAATTTAAATGTTACAATATATACTCCACCC CTGCAAAAAAGTGA
Upstream 100 bases:
>100_bases TACTTTTGACTTCGATCCTACTACCTGCTCTACCACTTCCGCTGGATTGTCAATAGCTTTAGACTTCAACATTGGTTCCT CCTCAGGGATCGCTTCTGCT
Downstream 100 bases:
>100_bases TTTTTCTATTATGGGGTGCAGCCAACAAAGCCTACAAATCCCATGTTAAGGAATATAGCTCCCAAAATGCCCGTTTATAG AAATAAAGAGGTTATTTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MSITSLFSIALDSKVDSSSGIASALSITSLFSIALDSKVDSSSGIASILLIISLSSIAFAFSIALDLKVDSSSGIASASS IISLFSIAVAFLFTRLTKFLKNISTISFLSMKISELYYYYILTKFKCYNIYSTPAKK
Sequences:
>Translated_137_residues MSITSLFSIALDSKVDSSSGIASALSITSLFSIALDSKVDSSSGIASILLIISLSSIAFAFSIALDLKVDSSSGIASASS IISLFSIAVAFLFTRLTKFLKNISTISFLSMKISELYYYYILTKFKCYNIYSTPAKK >Mature_136_residues SITSLFSIALDSKVDSSSGIASALSITSLFSIALDSKVDSSSGIASILLIISLSSIAFAFSIALDLKVDSSSGIASASSI ISLFSIAVAFLFTRLTKFLKNISTISFLSMKISELYYYYILTKFKCYNIYSTPAKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14677; Mature: 14546
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITSLFSIALDSKVDSSSGIASALSITSLFSIALDSKVDSSSGIASILLIISLSSIAFA CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH FSIALDLKVDSSSGIASASSIISLFSIAVAFLFTRLTKFLKNISTISFLSMKISELYYYY HHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILTKFKCYNIYSTPAKK HHHHHHEEEECCCCCCC >Mature Secondary Structure SITSLFSIALDSKVDSSSGIASALSITSLFSIALDSKVDSSSGIASILLIISLSSIAFA CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH FSIALDLKVDSSSGIASASSIISLFSIAVAFLFTRLTKFLKNISTISFLSMKISELYYYY HHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILTKFKCYNIYSTPAKK HHHHHHEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA