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The map label for this gene is ccmK [H]

Identifier: 170757544

GI number: 170757544

Start: 2245845

End: 2246729

Strand: Reverse

Name: ccmK [H]

Synonym: CLD_2532

Alternate gene names: 170757544

Gene position: 2246729-2245845 (Counterclockwise)

Preceding gene: 170754275

Following gene: 170756311

Centisome position: 56.76

GC content: 30.62

Gene sequence:

>885_bases
ATGCAAGCTCTTGGTTTAATAGAAACAAAGGGATTACTTGCAGCTGTTGAGGCAGCCGATACAATGGTAAAATCAGCAGA
TGTAAGTATTATTGAAAAAACTTATGTAGGTGGCGGTCTTGTTACAATTTCAGTTACAGGAGATGTAGGTGCAGTAAAAG
CATCTGTAGAAGCTGGAGTAGCAGCTGTAAAAAAACTTGATGAAAAGTTTTTAATTTCAGAACATGTAATTCCACGTCCT
CATGAAGAATTGGAAAGCATAATTGGACCTAATAATCCACCAGAAGATCTATCATCTAATGAAAGTACAGAAACTGTAGA
AGATATAGAAGTTGCAGAGTTTGTACAAGCTAGAGAAATTTTAGAAGATACAAAACAGGTTGAAACTGTTAAGGATCTAG
AAAATACAGACAAGACAGAGTCTGTACAAACTGTGGAGAATCTAAAAGATACAGAATCAGTAGAATCTCTAAATGATATA
GAGAATAAAAAAACTATAGACAGTGTTAAAGATACAGAATCCGTAAAAATCTCAAAAGATATAGTAGATACAGATAATGT
AGAAGATACAAAAAAAGCTGAAACTATAGAAAAAGTAAAAGATACGAAAGCTGTAGATAAAGCAGGACATGTAAATGAAT
TAGATGTGGATTTAGACAAAATACATAAGTTAAATTTAGAAAATCTACACAAAGATGATGTAGACAATTTAGTAAGAAAA
AATGGTTTAGAAAAAGCCATTTTAATATTAGCTAAGCTAAAAGTTGTTAAGCTTAGAAATCTAGCTCGTGAATATAAAGA
TTTGGGAATTGCAGGTAGAACAATTTCAAAAGCAGGTAAAAATTTATTAATTAACAAATTTAAATTATATTACGAGAAAA
ATTAG

Upstream 100 bases:

>100_bases
CTAAAGTGGTTTGGGGATCCCCAGATAAAGCTAGGGTATTTTATGCAACATATCCAGCAAATTGGGCGGATCTTTTATAG
AAGATTAGGAGGATTAACCT

Downstream 100 bases:

>100_bases
CTATTTTAAAGGTTACGAAAGGAAGTAAGGAATAATGGAAAACTTTGATAAGGATTTGCGTTCAATACAACAAGCGAGAG
ATCTTGCTAGACTTGGAAAA

Product: putative carbon dioxide concentrating mechanism protein CcmK-like protein

Products: NA

Alternate protein names: Carboxysome shell protein CsoS1 [H]

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MQALGLIETKGLLAAVEAADTMVKSADVSIIEKTYVGGGLVTISVTGDVGAVKASVEAGVAAVKKLDEKFLISEHVIPRP
HEELESIIGPNNPPEDLSSNESTETVEDIEVAEFVQAREILEDTKQVETVKDLENTDKTESVQTVENLKDTESVESLNDI
ENKKTIDSVKDTESVKISKDIVDTDNVEDTKKAETIEKVKDTKAVDKAGHVNELDVDLDKIHKLNLENLHKDDVDNLVRK
NGLEKAILILAKLKVVKLRNLAREYKDLGIAGRTISKAGKNLLINKFKLYYEKN

Sequences:

>Translated_294_residues
MQALGLIETKGLLAAVEAADTMVKSADVSIIEKTYVGGGLVTISVTGDVGAVKASVEAGVAAVKKLDEKFLISEHVIPRP
HEELESIIGPNNPPEDLSSNESTETVEDIEVAEFVQAREILEDTKQVETVKDLENTDKTESVQTVENLKDTESVESLNDI
ENKKTIDSVKDTESVKISKDIVDTDNVEDTKKAETIEKVKDTKAVDKAGHVNELDVDLDKIHKLNLENLHKDDVDNLVRK
NGLEKAILILAKLKVVKLRNLAREYKDLGIAGRTISKAGKNLLINKFKLYYEKN
>Mature_294_residues
MQALGLIETKGLLAAVEAADTMVKSADVSIIEKTYVGGGLVTISVTGDVGAVKASVEAGVAAVKKLDEKFLISEHVIPRP
HEELESIIGPNNPPEDLSSNESTETVEDIEVAEFVQAREILEDTKQVETVKDLENTDKTESVQTVENLKDTESVESLNDI
ENKKTIDSVKDTESVKISKDIVDTDNVEDTKKAETIEKVKDTKAVDKAGHVNELDVDLDKIHKLNLENLHKDDVDNLVRK
NGLEKAILILAKLKVVKLRNLAREYKDLGIAGRTISKAGKNLLINKFKLYYEKN

Specific function: May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered [H]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082108, Length=87, Percent_Identity=52.8735632183908, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 32340; Mature: 32340

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQALGLIETKGLLAAVEAADTMVKSADVSIIEKTYVGGGLVTISVTGDVGAVKASVEAGV
CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHH
AAVKKLDEKFLISEHVIPRPHEELESIIGPNNPPEDLSSNESTETVEDIEVAEFVQAREI
HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHH
LEDTKQVETVKDLENTDKTESVQTVENLKDTESVESLNDIENKKTIDSVKDTESVKISKD
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHH
IVDTDNVEDTKKAETIEKVKDTKAVDKAGHVNELDVDLDKIHKLNLENLHKDDVDNLVRK
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHCCHHHHHHHHHH
NGLEKAILILAKLKVVKLRNLAREYKDLGIAGRTISKAGKNLLINKFKLYYEKN
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHEEEEEECC
>Mature Secondary Structure
MQALGLIETKGLLAAVEAADTMVKSADVSIIEKTYVGGGLVTISVTGDVGAVKASVEAGV
CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHH
AAVKKLDEKFLISEHVIPRPHEELESIIGPNNPPEDLSSNESTETVEDIEVAEFVQAREI
HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHH
LEDTKQVETVKDLENTDKTESVQTVENLKDTESVESLNDIENKKTIDSVKDTESVKISKD
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHH
IVDTDNVEDTKKAETIEKVKDTKAVDKAGHVNELDVDLDKIHKLNLENLHKDDVDNLVRK
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHCCHHHHHHHHHH
NGLEKAILILAKLKVVKLRNLAREYKDLGIAGRTISKAGKNLLINKFKLYYEKN
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12917486 [H]