| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is yuzA [H]
Identifier: 170757460
GI number: 170757460
Start: 536260
End: 536475
Strand: Reverse
Name: yuzA [H]
Synonym: CLD_0321
Alternate gene names: 170757460
Gene position: 536475-536260 (Counterclockwise)
Preceding gene: 170757702
Following gene: 170756756
Centisome position: 13.55
GC content: 30.09
Gene sequence:
>216_bases ATGAAAACATTAGATATTATTTCACTTACATTAGTAATAATTGGGGCTATAAACTGGGGACTTATTGGTTTTTTTAGATT TGACTTAGTTGCAGCTTTATTTGGAAATATGTCTGCATTTACAAGAGTTATATATGCTCTTGTAGGTATAGCAGGTTTAT ATGCAATTTCATTCTATGGAAGAGATAGAGATGAAGAACCTAGAGAAGAACAATAA
Upstream 100 bases:
>100_bases AGAAATAATATAATTGTTTTTATTAATATTTTCCTAAAACTCATAATTTAGTTATTTTTGCAAATACTAACATTGTAAAA CTAATAAAGGAGAGGAAAAT
Downstream 100 bases:
>100_bases GGAAAGTGCTAAGCACTTTCCTTATTTTATGCATCCATTTCTAAAACTTCTTCTAAACTTTCTTCTTCTGGTATATCATT TGGCTTACCTACAAATCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 71
Protein sequence:
>71_residues MKTLDIISLTLVIIGAINWGLIGFFRFDLVAALFGNMSAFTRVIYALVGIAGLYAISFYGRDRDEEPREEQ
Sequences:
>Translated_71_residues MKTLDIISLTLVIIGAINWGLIGFFRFDLVAALFGNMSAFTRVIYALVGIAGLYAISFYGRDRDEEPREEQ >Mature_71_residues MKTLDIISLTLVIIGAINWGLIGFFRFDLVAALFGNMSAFTRVIYALVGIAGLYAISFYGRDRDEEPREEQ
Specific function: Unknown
COG id: COG2155
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007211 [H]
Pfam domain/function: PF04070 DUF378 [H]
EC number: NA
Molecular weight: Translated: 7960; Mature: 7960
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLDIISLTLVIIGAINWGLIGFFRFDLVAALFGNMSAFTRVIYALVGIAGLYAISFYG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC RDRDEEPREEQ CCCCCCCCCCC >Mature Secondary Structure MKTLDIISLTLVIIGAINWGLIGFFRFDLVAALFGNMSAFTRVIYALVGIAGLYAISFYG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC RDRDEEPREEQ CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]