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The map label for this gene is 170757429

Identifier: 170757429

GI number: 170757429

Start: 53698

End: 54294

Strand: Reverse

Name: 170757429

Synonym: CLD_0768

Alternate gene names: NA

Gene position: 54294-53698 (Counterclockwise)

Preceding gene: 170754739

Following gene: 170756726

Centisome position: 1.37

GC content: 28.14

Gene sequence:

>597_bases
TTGGATATACAAGAATCTTTAAAGAATAAAATTAAAAATATTTCAGAAGAATATGTAGGTGATAAAATAGGTGGCTACAT
AACAGGTGACGGACCTATACCATGTGATATTCTATTCATAGGAGAAGCCCCAGGTAAAAATGAAGTAGAAGAAGGTAAAC
CTTTTGTAGGTATGGCTGGTAAAAACTTTGAAAAATATTTAAATTCTATAGGTCTTAAAAGGGAACTTATTAGAATTACT
AATACTTGTTTTTTTAGGCCTATAAAAATCAAAGAAGGTAAAAATGGAAGAATATCTATAAGCAATAGACCACCTAAGGC
TTCAGAAATATCCTTATTTAGTTCTATCCTTGATGAAGAGATTAATTTAGTAAACCCTAAATTAATAATTACATTAGGAA
ATGTTCCCTTGAAAAGACTAACAAGTTTTAAGTCCATTGGTGATTGTCATGGTAATATTTATTTTATTGAAAATTTAAAT
AGATATGTATTTCCAATGTATCATCCATCAGCTTTGACCTACAATAGAAGTGAAGAATTTCATAAAATCTATGAAAATGA
TTGGGTTAAATTAAGAGAAGATCTAGACAAGATTTAA

Upstream 100 bases:

>100_bases
AAAAGAATACTCTTATTTAACTACATTAATAGTTATGCTAATAATGTAAATTTAAAAGTAAATGAAATTTATATAAATAT
ATAGGAAGGAGTTTTTTAAA

Downstream 100 bases:

>100_bases
ATCTAAGGCCCTTGTATTCATAAAAATCTATATTATGAGACTGATATAGATTTTTATTTTATTATTTCATGTAACATTGT
ATATATTTATAATTCTCCAA

Product: uracil-DNA glycosylase family protein

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; Uracil-DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase Family Protein; DNA Polymerase Bacteriophage-Type; DNA Polymerase-Related Protein Bacteriophage-Type; Uracil DNA Glycosylase; Uracil DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase Superfamily; Phage Spo1 DNA Polymerase-Related Protein; DNA-Directed DNA Polymerase; Phage SPO1 DNA Polymerase Domain-Containing Protein; DNA Polymerase Domain-Containing Protein; DNA Glycosylase; Uracil-DNA Glycosylase C-Terminal; Phage SpO1 DNA Polymerase-Related Protein; Uracil DNA Glycosylase Protein; Uracyl DNA Glycosilase; Bacteriophage-Related DNA Polymerase; Phage DNA Polymerase-Related Protein; N-Terminus Of Bacteriophage-Type DNA Polymerase; Phage DNA Polymerase; Uracil-DNA Glycosylase C-Terminal Domain Protein; Uracil-DNA Glycosylase-Related Protein; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; N-Terminus Of Phage SPO1 DNA Polymerase; Helicase/Glycosylase

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MDIQESLKNKIKNISEEYVGDKIGGYITGDGPIPCDILFIGEAPGKNEVEEGKPFVGMAGKNFEKYLNSIGLKRELIRIT
NTCFFRPIKIKEGKNGRISISNRPPKASEISLFSSILDEEINLVNPKLIITLGNVPLKRLTSFKSIGDCHGNIYFIENLN
RYVFPMYHPSALTYNRSEEFHKIYENDWVKLREDLDKI

Sequences:

>Translated_198_residues
MDIQESLKNKIKNISEEYVGDKIGGYITGDGPIPCDILFIGEAPGKNEVEEGKPFVGMAGKNFEKYLNSIGLKRELIRIT
NTCFFRPIKIKEGKNGRISISNRPPKASEISLFSSILDEEINLVNPKLIITLGNVPLKRLTSFKSIGDCHGNIYFIENLN
RYVFPMYHPSALTYNRSEEFHKIYENDWVKLREDLDKI
>Mature_198_residues
MDIQESLKNKIKNISEEYVGDKIGGYITGDGPIPCDILFIGEAPGKNEVEEGKPFVGMAGKNFEKYLNSIGLKRELIRIT
NTCFFRPIKIKEGKNGRISISNRPPKASEISLFSSILDEEINLVNPKLIITLGNVPLKRLTSFKSIGDCHGNIYFIENLN
RYVFPMYHPSALTYNRSEEFHKIYENDWVKLREDLDKI

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 22588; Mature: 22588

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIQESLKNKIKNISEEYVGDKIGGYITGDGPIPCDILFIGEAPGKNEVEEGKPFVGMAG
CCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEEECCCCCCCHHCCCCEEEECC
KNFEKYLNSIGLKRELIRITNTCFFRPIKIKEGKNGRISISNRPPKASEISLFSSILDEE
CCHHHHHHHCCHHHHHHHHHHHHEEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHH
INLVNPKLIITLGNVPLKRLTSFKSIGDCHGNIYFIENLNRYVFPMYHPSALTYNRSEEF
HCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCEEEECCCHHH
HKIYENDWVKLREDLDKI
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDIQESLKNKIKNISEEYVGDKIGGYITGDGPIPCDILFIGEAPGKNEVEEGKPFVGMAG
CCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEEECCCCCCCHHCCCCEEEECC
KNFEKYLNSIGLKRELIRITNTCFFRPIKIKEGKNGRISISNRPPKASEISLFSSILDEE
CCHHHHHHHCCHHHHHHHHHHHHEEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHH
INLVNPKLIITLGNVPLKRLTSFKSIGDCHGNIYFIENLNRYVFPMYHPSALTYNRSEEF
HCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCEEEECCCHHH
HKIYENDWVKLREDLDKI
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA