| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is blaR1 [H]
Identifier: 170757428
GI number: 170757428
Start: 797425
End: 799623
Strand: Direct
Name: blaR1 [H]
Synonym: CLD_0086
Alternate gene names: 170757428
Gene position: 797425-799623 (Clockwise)
Preceding gene: 170755728
Following gene: 170754315
Centisome position: 20.15
GC content: 27.01
Gene sequence:
>2199_bases ATGGATATCTTAGTCAAAATTTTTTTATGGGTTCTACGCGCTTCATTAACAGCAAGCATTGCAGCTTTAGTAGTAATTTT AATCTCAAAATTATTTAATAGCCATATTGGGGTAAGGTTTCAGCATGCTTTGCTGCTTATAATTATATTAAGACTTATAA TACCTGTGAATATTCCAAGCAATATAAATTTGTTTAATATTTTATTCGATAAATATGAAAATAAAATATTAAACATTGAA AGCAAAAATGATACTAAAGCTGCTTATGATTTTTTAGCAAAAGGAAAAATTTATTTAAATGATAAAACAAGAGATGGTAA AGTGACCTCGAGCTCACCTTCAGAAAATATAAGTTACAAGCAAGAAGATACAGCAAAAGAAAAAATAATCACTGGTACTT TAAATATAGCTTCTTGTATATGGTTAATTGGTGTGCTTAGTATAGCTTTATTTTTTTTAACAATTCTATGGAAATTTAAT ACAAAAATTACAAAATTAGAACAAACTCCAGATCTAAAGATTGTATCACTGTTAGAGGAATGCAAAAAGAAATTAAGCAT AAACAGAAATATTCCTATTTATGCTTGTGATGACTTTAAAACTCCCTGCATATTTGGAGTTTTAAAACCAAAGATTTATA TTCCAAAATATAAGTATAGTACAAATGATTATAAATATCTATCACATATATTTTTGCATGAACTGATACATTATAAGAGA AAAGATTTGATCTATAATTTTCTTGGAACCATTGCTATTTTGATACATTGGTTTAATCCAATGATATGGTTTATAGTAAA GAAAATGAAACTTCAAAGAGAGTATGCTTGTGATACTTATGTGCTTGAAATTTTAGGCAAAGAAGAATCTATAGAATATG GAATGACACTGATTAATTTTTCAAAATTGATTTCAAGTAGTAGAAAAGTACCACAGTTAGCGATTTTTTTTGAAACAAAG AATCAAATTAAAAGGAGAATAAAAATGATAAAAAATTTTAAAAAAGGATCTTATAGAATGCCAGCAGCAGCAGTTATATG TTGTATGTTAGCCGGAGGGATTATGTTTACCAATGGTGTAACCGCTAAAGATATGAAAGGTAATACTAATGTTTCAGCTG TTATAAATAAGGAAAATAATAGATTTCTTATTGATTCGCAAATTAAAAGTTATGATAATTTTAAAAAAGCAGAAAAAATT ACAGGATCTAAAGTCAAAGTACCTAATTATATTCCAGGAAATTATGCAGCTGGTCCTTATTTTCACGTTATAAAGATATC TGATAATGAATATTTTTTGAGAAAAATTTTTGGTGATGAAAAGGGTATAGATTTTACATTTCAAGCTTCTAAAGGAAATA TGGAAGAAGTCTTAAAGAAAATTGCAGAGATTGAAAATAAAGAGAGTTTAGGAACGTTATCCGATACTGAAAAAAATCAA AATCAAGGGAAAGTTGAATTTAGCAAAGAAGCAATGAATTTAGCAGGGATAAATGGATCTAATATTACCATAAAAAGAAC ATTACCTAACAATACTCAAAGAATAAAGAAATTTTTTGCATGGCAAAATGAAGGAATGTGGTATAGCATAGGATATGATT GGAAAGCACAAACAAGCGAAGGAAGCGGAAGTTTAATGAGTATTTCTATAGATGAGGTAGGAAAAATTGCCTCCTCAATA AAATATATTGACGATGTGAAAAATGTAAATTATTCTGCTGGTGAAGAAGAAGATATTTCAACAGAAAGTATAACTTTAGA GATATATGATAAAGAAGATTTAAAAAGAGCAAAAGAACTTTTAGGATTCAATCCTAAATTCCCATTAAATATTAATAAAG AGATAACTATAAATGGAGCAGCAGTTTCCATTTCACCAAATTCTGATATAAAAAATAAAAGGCTTGAGTATGAACTTAAT ACACTTTACAATGTAAAAAATGGATATATAACGTTTACTCAATGGAAAAGTTCAAAAAAATATGAGGATATAAAGAAAAA AGTTAATCCAATAGAGATTGATGGTAAAAAAGTTTTTAAATATGAGGATTATACAGAAACTCAAACAGATAAAAAATTAA AAGTAGAGAATTATATTTGGGAAGAAAATGGATCTTATTGTGAAGCTTCAATAACAGAAGGTAATGGAAATACAAATGAA ATAGCTAAAGTATTTGTTAATTCAAAGCCAATAAATTAG
Upstream 100 bases:
>100_bases GTCTGAAGAGGAAATTGAAGAGCTAGAGCAAATTCTTAAAGATAAGAAAGAAGGAAAGTAAGGTTAGGCTTTTGTAATTG AAAATGGGAGGATATTAAAT
Downstream 100 bases:
>100_bases AGTAAATTATATATTAAAAAAAGGGCATCGATATAGTAAGATTACTATACTGATGTCCTTTTCTAAATTATTTAAAATAT AGTAAATATTTAAAAAAGAG
Product: M56 family peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 732; Mature: 732
Protein sequence:
>732_residues MDILVKIFLWVLRASLTASIAALVVILISKLFNSHIGVRFQHALLLIIILRLIIPVNIPSNINLFNILFDKYENKILNIE SKNDTKAAYDFLAKGKIYLNDKTRDGKVTSSSPSENISYKQEDTAKEKIITGTLNIASCIWLIGVLSIALFFLTILWKFN TKITKLEQTPDLKIVSLLEECKKKLSINRNIPIYACDDFKTPCIFGVLKPKIYIPKYKYSTNDYKYLSHIFLHELIHYKR KDLIYNFLGTIAILIHWFNPMIWFIVKKMKLQREYACDTYVLEILGKEESIEYGMTLINFSKLISSSRKVPQLAIFFETK NQIKRRIKMIKNFKKGSYRMPAAAVICCMLAGGIMFTNGVTAKDMKGNTNVSAVINKENNRFLIDSQIKSYDNFKKAEKI TGSKVKVPNYIPGNYAAGPYFHVIKISDNEYFLRKIFGDEKGIDFTFQASKGNMEEVLKKIAEIENKESLGTLSDTEKNQ NQGKVEFSKEAMNLAGINGSNITIKRTLPNNTQRIKKFFAWQNEGMWYSIGYDWKAQTSEGSGSLMSISIDEVGKIASSI KYIDDVKNVNYSAGEEEDISTESITLEIYDKEDLKRAKELLGFNPKFPLNINKEITINGAAVSISPNSDIKNKRLEYELN TLYNVKNGYITFTQWKSSKKYEDIKKKVNPIEIDGKKVFKYEDYTETQTDKKLKVENYIWEENGSYCEASITEGNGNTNE IAKVFVNSKPIN
Sequences:
>Translated_732_residues MDILVKIFLWVLRASLTASIAALVVILISKLFNSHIGVRFQHALLLIIILRLIIPVNIPSNINLFNILFDKYENKILNIE SKNDTKAAYDFLAKGKIYLNDKTRDGKVTSSSPSENISYKQEDTAKEKIITGTLNIASCIWLIGVLSIALFFLTILWKFN TKITKLEQTPDLKIVSLLEECKKKLSINRNIPIYACDDFKTPCIFGVLKPKIYIPKYKYSTNDYKYLSHIFLHELIHYKR KDLIYNFLGTIAILIHWFNPMIWFIVKKMKLQREYACDTYVLEILGKEESIEYGMTLINFSKLISSSRKVPQLAIFFETK NQIKRRIKMIKNFKKGSYRMPAAAVICCMLAGGIMFTNGVTAKDMKGNTNVSAVINKENNRFLIDSQIKSYDNFKKAEKI TGSKVKVPNYIPGNYAAGPYFHVIKISDNEYFLRKIFGDEKGIDFTFQASKGNMEEVLKKIAEIENKESLGTLSDTEKNQ NQGKVEFSKEAMNLAGINGSNITIKRTLPNNTQRIKKFFAWQNEGMWYSIGYDWKAQTSEGSGSLMSISIDEVGKIASSI KYIDDVKNVNYSAGEEEDISTESITLEIYDKEDLKRAKELLGFNPKFPLNINKEITINGAAVSISPNSDIKNKRLEYELN TLYNVKNGYITFTQWKSSKKYEDIKKKVNPIEIDGKKVFKYEDYTETQTDKKLKVENYIWEENGSYCEASITEGNGNTNE IAKVFVNSKPIN >Mature_732_residues MDILVKIFLWVLRASLTASIAALVVILISKLFNSHIGVRFQHALLLIIILRLIIPVNIPSNINLFNILFDKYENKILNIE SKNDTKAAYDFLAKGKIYLNDKTRDGKVTSSSPSENISYKQEDTAKEKIITGTLNIASCIWLIGVLSIALFFLTILWKFN TKITKLEQTPDLKIVSLLEECKKKLSINRNIPIYACDDFKTPCIFGVLKPKIYIPKYKYSTNDYKYLSHIFLHELIHYKR KDLIYNFLGTIAILIHWFNPMIWFIVKKMKLQREYACDTYVLEILGKEESIEYGMTLINFSKLISSSRKVPQLAIFFETK NQIKRRIKMIKNFKKGSYRMPAAAVICCMLAGGIMFTNGVTAKDMKGNTNVSAVINKENNRFLIDSQIKSYDNFKKAEKI TGSKVKVPNYIPGNYAAGPYFHVIKISDNEYFLRKIFGDEKGIDFTFQASKGNMEEVLKKIAEIENKESLGTLSDTEKNQ NQGKVEFSKEAMNLAGINGSNITIKRTLPNNTQRIKKFFAWQNEGMWYSIGYDWKAQTSEGSGSLMSISIDEVGKIASSI KYIDDVKNVNYSAGEEEDISTESITLEIYDKEDLKRAKELLGFNPKFPLNINKEITINGAAVSISPNSDIKNKRLEYELN TLYNVKNGYITFTQWKSSKKYEDIKKKVNPIEIDGKKVFKYEDYTETQTDKKLKVENYIWEENGSYCEASITEGNGNTNE IAKVFVNSKPIN
Specific function: BlaR1 is a potential penicillin-binding protein required for induction of beta-lactamase in Bacillus licheniformis [H]
COG id: COG4219
COG function: function code KT; Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M56 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001460 - InterPro: IPR008756 [H]
Pfam domain/function: PF05569 Peptidase_M56; PF00905 Transpeptidase [H]
EC number: NA
Molecular weight: Translated: 83759; Mature: 83759
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDILVKIFLWVLRASLTASIAALVVILISKLFNSHIGVRFQHALLLIIILRLIIPVNIPS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC NINLFNILFDKYENKILNIESKNDTKAAYDFLAKGKIYLNDKTRDGKVTSSSPSENISYK CCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCEEEECCCCCCCEECCCCCCCCCCCC QEDTAKEKIITGTLNIASCIWLIGVLSIALFFLTILWKFNTKITKLEQTPDLKIVSLLEE CCCCHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHH CKKKLSINRNIPIYACDDFKTPCIFGVLKPKIYIPKYKYSTNDYKYLSHIFLHELIHYKR HHHHHCCCCCCCEEEECCCCCCEEEEEECCEEEECCEECCCCHHHHHHHHHHHHHHHHHH KDLIYNFLGTIAILIHWFNPMIWFIVKKMKLQREYACDTYVLEILGKEESIEYGMTLINF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHH SKLISSSRKVPQLAIFFETKNQIKRRIKMIKNFKKGSYRMPAAAVICCMLAGGIMFTNGV HHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEECCC TAKDMKGNTNVSAVINKENNRFLIDSQIKSYDNFKKAEKITGSKVKVPNYIPGNYAAGPY CCCCCCCCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCE FHVIKISDNEYFLRKIFGDEKGIDFTFQASKGNMEEVLKKIAEIENKESLGTLSDTEKNQ EEEEEECCCCHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC NQGKVEFSKEAMNLAGINGSNITIKRTLPNNTQRIKKFFAWQNEGMWYSIGYDWKAQTSE CCCCEEECHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCEEECCCC GSGSLMSISIDEVGKIASSIKYIDDVKNVNYSAGEEEDISTESITLEIYDKEDLKRAKEL CCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECHHHHHHHHHH LGFNPKFPLNINKEITINGAAVSISPNSDIKNKRLEYELNTLYNVKNGYITFTQWKSSKK HCCCCCCCCCCCCEEEEECEEEEECCCCCCCCCEEEEEEEHEEECCCCEEEEEECCCCCH YEDIKKKVNPIEIDGKKVFKYEDYTETQTDKKLKVENYIWEENGSYCEASITEGNGNTNE HHHHHHCCCCEEECCCEEEEECCCCCCCCCCEEEEEHEEECCCCCEEEEEEECCCCCHHH IAKVFVNSKPIN HHEEEECCCCCC >Mature Secondary Structure MDILVKIFLWVLRASLTASIAALVVILISKLFNSHIGVRFQHALLLIIILRLIIPVNIPS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC NINLFNILFDKYENKILNIESKNDTKAAYDFLAKGKIYLNDKTRDGKVTSSSPSENISYK CCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCEEEECCCCCCCEECCCCCCCCCCCC QEDTAKEKIITGTLNIASCIWLIGVLSIALFFLTILWKFNTKITKLEQTPDLKIVSLLEE CCCCHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHH CKKKLSINRNIPIYACDDFKTPCIFGVLKPKIYIPKYKYSTNDYKYLSHIFLHELIHYKR HHHHHCCCCCCCEEEECCCCCCEEEEEECCEEEECCEECCCCHHHHHHHHHHHHHHHHHH KDLIYNFLGTIAILIHWFNPMIWFIVKKMKLQREYACDTYVLEILGKEESIEYGMTLINF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHH SKLISSSRKVPQLAIFFETKNQIKRRIKMIKNFKKGSYRMPAAAVICCMLAGGIMFTNGV HHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEECCC TAKDMKGNTNVSAVINKENNRFLIDSQIKSYDNFKKAEKITGSKVKVPNYIPGNYAAGPY CCCCCCCCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCE FHVIKISDNEYFLRKIFGDEKGIDFTFQASKGNMEEVLKKIAEIENKESLGTLSDTEKNQ EEEEEECCCCHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC NQGKVEFSKEAMNLAGINGSNITIKRTLPNNTQRIKKFFAWQNEGMWYSIGYDWKAQTSE CCCCEEECHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCEEECCCC GSGSLMSISIDEVGKIASSIKYIDDVKNVNYSAGEEEDISTESITLEIYDKEDLKRAKEL CCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECHHHHHHHHHH LGFNPKFPLNINKEITINGAAVSISPNSDIKNKRLEYELNTLYNVKNGYITFTQWKSSKK HCCCCCCCCCCCCEEEEECEEEEECCCCCCCCCEEEEEEEHEEECCCCEEEEEECCCCCH YEDIKKKVNPIEIDGKKVFKYEDYTETQTDKKLKVENYIWEENGSYCEASITEGNGNTNE HHHHHHCCCCEEECCCEEEEECCCCCCCCCCEEEEEHEEECCCCCEEEEEEECCCCCHHH IAKVFVNSKPIN HHEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3040663; 3260234; 2404938 [H]