| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is senX3 [H]
Identifier: 170757423
GI number: 170757423
Start: 1479849
End: 1480946
Strand: Direct
Name: senX3 [H]
Synonym: CLD_3222
Alternate gene names: 170757423
Gene position: 1479849-1480946 (Clockwise)
Preceding gene: 170756446
Following gene: 170754333
Centisome position: 37.39
GC content: 24.68
Gene sequence:
>1098_bases ATGTATAGAGTAAATATAAAAAGCGGTTTAGCTATAATTATATATTCTATAATCTTAACTTTAGTGTTAGGAATAGGCAT TTATGGCTTTAAAATTTCATTTAGTAAATCACCAGAAAAAGTGGTTATGGATAAGGCTAATGTTTATATAATGGATAACA ATGACTACCAAAACATAATTTCGTTTAACACAATAAAGGCTTCCATGAGTAAGATAACAGAAGTAGGCGAAATTGGAAGT GTTTATGAAAATATTGGATCTAAAAAATTATATATGTTTATATTTATGTTTTTTATCGTGCTAGTAATATCATCTTTTTT ATTATGGATAAAATTAAGCCACATACATGATAAAGAGATGAAAAATATTATTAAAAAGTTAAATGTATTAGATGATAATA TAGAACCTGATATAGTAAGTAAATCTTTTGCGATGGCTTATGAGAATGTCAAAAATAAATTTAATAAAAATTTAAATGAC TACAAAACATTAAATTCTTATTTATCTCATGAACAGAAGAATGCTATATCCATTTTAAGAACTAATTTAGAAGCTGATGG AAATTATCAGTATATTAAATTTATTGACAATATTTCAGATAGTATAGATGATATTTTAACACTAAGTGATATAAGAGATG ATAAAAATATGACAGAGGTAGATGTTTCTTTAATATGTGCATCAGTTTGTGATACATATCGAAAGATATATAAACATATA AATTTTCAGTTTGATGACGAAAGTAACACAACTATTTTGGCTAAAGAAAGATGGATTTATCGTGCTATAAGTAATTTAGT AGACAATGCTATAAAGTATGGTGAAGGAAATCCTATTGAGGTAACTGTAAAAAATAAAAATAATAGTGTCATTGTTACTG TTAAAGATAATGGTATAGGAATAGAGAAAGATTCCATAGAAAAAATTTTTAATAATAAATACAGGATTAATGAATTAAAA AAAGATGGATATGGAATAGGATTAAGTTTGGTTTCTCATGTATGTGAATTGTGCAACGGATTTGTGATAGCAGAAAGTGA ATTAAATAAAGGTTCTTGTTTTTATTTATCCTTTTGTGAATATAAAAAAACCAATTAA
Upstream 100 bases:
>100_bases CATCTGTATTAAGAGTACATATTGCAAGGCTAAAAAAGAAATTAAGTAATGCTTCTGGAAAAGAAATTTTAATTAATATT AGAGGAAAGGGATATGTTTT
Downstream 100 bases:
>100_bases CATTGAATAAACAATTGATTTGTTATACTGGCTATACAATAAAATTCAAAAAAGGAGAGTAGGGCATGTATATTTTAAAA AATGCATTAAAAAATCTTAC
Product: putative sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MYRVNIKSGLAIIIYSIILTLVLGIGIYGFKISFSKSPEKVVMDKANVYIMDNNDYQNIISFNTIKASMSKITEVGEIGS VYENIGSKKLYMFIFMFFIVLVISSFLLWIKLSHIHDKEMKNIIKKLNVLDDNIEPDIVSKSFAMAYENVKNKFNKNLND YKTLNSYLSHEQKNAISILRTNLEADGNYQYIKFIDNISDSIDDILTLSDIRDDKNMTEVDVSLICASVCDTYRKIYKHI NFQFDDESNTTILAKERWIYRAISNLVDNAIKYGEGNPIEVTVKNKNNSVIVTVKDNGIGIEKDSIEKIFNNKYRINELK KDGYGIGLSLVSHVCELCNGFVIAESELNKGSCFYLSFCEYKKTN
Sequences:
>Translated_365_residues MYRVNIKSGLAIIIYSIILTLVLGIGIYGFKISFSKSPEKVVMDKANVYIMDNNDYQNIISFNTIKASMSKITEVGEIGS VYENIGSKKLYMFIFMFFIVLVISSFLLWIKLSHIHDKEMKNIIKKLNVLDDNIEPDIVSKSFAMAYENVKNKFNKNLND YKTLNSYLSHEQKNAISILRTNLEADGNYQYIKFIDNISDSIDDILTLSDIRDDKNMTEVDVSLICASVCDTYRKIYKHI NFQFDDESNTTILAKERWIYRAISNLVDNAIKYGEGNPIEVTVKNKNNSVIVTVKDNGIGIEKDSIEKIFNNKYRINELK KDGYGIGLSLVSHVCELCNGFVIAESELNKGSCFYLSFCEYKKTN >Mature_365_residues MYRVNIKSGLAIIIYSIILTLVLGIGIYGFKISFSKSPEKVVMDKANVYIMDNNDYQNIISFNTIKASMSKITEVGEIGS VYENIGSKKLYMFIFMFFIVLVISSFLLWIKLSHIHDKEMKNIIKKLNVLDDNIEPDIVSKSFAMAYENVKNKFNKNLND YKTLNSYLSHEQKNAISILRTNLEADGNYQYIKFIDNISDSIDDILTLSDIRDDKNMTEVDVSLICASVCDTYRKIYKHI NFQFDDESNTTILAKERWIYRAISNLVDNAIKYGEGNPIEVTVKNKNNSVIVTVKDNGIGIEKDSIEKIFNNKYRINELK KDGYGIGLSLVSHVCELCNGFVIAESELNKGSCFYLSFCEYKKTN
Specific function: Part of the two-component regulatory system senX3/regX3. Phosphorylates regX3 under conditions of phosphate limitation. Probably does not itself sense phosphate concentrations, which may be relayed to senX3 by the pstSCAB phosphate transporter system [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 41766; Mature: 41766
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRVNIKSGLAIIIYSIILTLVLGIGIYGFKISFSKSPEKVVMDKANVYIMDNNDYQNII CEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEECCCCEEEEECCCCHHHH SFNTIKASMSKITEVGEIGSVYENIGSKKLYMFIFMFFIVLVISSFLLWIKLSHIHDKEM HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH KNIIKKLNVLDDNIEPDIVSKSFAMAYENVKNKFNKNLNDYKTLNSYLSHEQKNAISILR HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH TNLEADGNYQYIKFIDNISDSIDDILTLSDIRDDKNMTEVDVSLICASVCDTYRKIYKHI HCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC NFQFDDESNTTILAKERWIYRAISNLVDNAIKYGEGNPIEVTVKNKNNSVIVTVKDNGIG CCEECCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCC IEKDSIEKIFNNKYRINELKKDGYGIGLSLVSHVCELCNGFVIAESELNKGSCFYLSFCE CCHHHHHHHHCCCEEEHHHCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEECC YKKTN CCCCC >Mature Secondary Structure MYRVNIKSGLAIIIYSIILTLVLGIGIYGFKISFSKSPEKVVMDKANVYIMDNNDYQNII CEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEECCCCEEEEECCCCHHHH SFNTIKASMSKITEVGEIGSVYENIGSKKLYMFIFMFFIVLVISSFLLWIKLSHIHDKEM HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH KNIIKKLNVLDDNIEPDIVSKSFAMAYENVKNKFNKNLNDYKTLNSYLSHEQKNAISILR HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH TNLEADGNYQYIKFIDNISDSIDDILTLSDIRDDKNMTEVDVSLICASVCDTYRKIYKHI HCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC NFQFDDESNTTILAKERWIYRAISNLVDNAIKYGEGNPIEVTVKNKNNSVIVTVKDNGIG CCEECCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCC IEKDSIEKIFNNKYRINELKKDGYGIGLSLVSHVCELCNGFVIAESELNKGSCFYLSFCE CCHHHHHHHHCCCEEEHHHCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEECC YKKTN CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA