Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is senX3 [H]

Identifier: 170757423

GI number: 170757423

Start: 1479849

End: 1480946

Strand: Direct

Name: senX3 [H]

Synonym: CLD_3222

Alternate gene names: 170757423

Gene position: 1479849-1480946 (Clockwise)

Preceding gene: 170756446

Following gene: 170754333

Centisome position: 37.39

GC content: 24.68

Gene sequence:

>1098_bases
ATGTATAGAGTAAATATAAAAAGCGGTTTAGCTATAATTATATATTCTATAATCTTAACTTTAGTGTTAGGAATAGGCAT
TTATGGCTTTAAAATTTCATTTAGTAAATCACCAGAAAAAGTGGTTATGGATAAGGCTAATGTTTATATAATGGATAACA
ATGACTACCAAAACATAATTTCGTTTAACACAATAAAGGCTTCCATGAGTAAGATAACAGAAGTAGGCGAAATTGGAAGT
GTTTATGAAAATATTGGATCTAAAAAATTATATATGTTTATATTTATGTTTTTTATCGTGCTAGTAATATCATCTTTTTT
ATTATGGATAAAATTAAGCCACATACATGATAAAGAGATGAAAAATATTATTAAAAAGTTAAATGTATTAGATGATAATA
TAGAACCTGATATAGTAAGTAAATCTTTTGCGATGGCTTATGAGAATGTCAAAAATAAATTTAATAAAAATTTAAATGAC
TACAAAACATTAAATTCTTATTTATCTCATGAACAGAAGAATGCTATATCCATTTTAAGAACTAATTTAGAAGCTGATGG
AAATTATCAGTATATTAAATTTATTGACAATATTTCAGATAGTATAGATGATATTTTAACACTAAGTGATATAAGAGATG
ATAAAAATATGACAGAGGTAGATGTTTCTTTAATATGTGCATCAGTTTGTGATACATATCGAAAGATATATAAACATATA
AATTTTCAGTTTGATGACGAAAGTAACACAACTATTTTGGCTAAAGAAAGATGGATTTATCGTGCTATAAGTAATTTAGT
AGACAATGCTATAAAGTATGGTGAAGGAAATCCTATTGAGGTAACTGTAAAAAATAAAAATAATAGTGTCATTGTTACTG
TTAAAGATAATGGTATAGGAATAGAGAAAGATTCCATAGAAAAAATTTTTAATAATAAATACAGGATTAATGAATTAAAA
AAAGATGGATATGGAATAGGATTAAGTTTGGTTTCTCATGTATGTGAATTGTGCAACGGATTTGTGATAGCAGAAAGTGA
ATTAAATAAAGGTTCTTGTTTTTATTTATCCTTTTGTGAATATAAAAAAACCAATTAA

Upstream 100 bases:

>100_bases
CATCTGTATTAAGAGTACATATTGCAAGGCTAAAAAAGAAATTAAGTAATGCTTCTGGAAAAGAAATTTTAATTAATATT
AGAGGAAAGGGATATGTTTT

Downstream 100 bases:

>100_bases
CATTGAATAAACAATTGATTTGTTATACTGGCTATACAATAAAATTCAAAAAAGGAGAGTAGGGCATGTATATTTTAAAA
AATGCATTAAAAAATCTTAC

Product: putative sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MYRVNIKSGLAIIIYSIILTLVLGIGIYGFKISFSKSPEKVVMDKANVYIMDNNDYQNIISFNTIKASMSKITEVGEIGS
VYENIGSKKLYMFIFMFFIVLVISSFLLWIKLSHIHDKEMKNIIKKLNVLDDNIEPDIVSKSFAMAYENVKNKFNKNLND
YKTLNSYLSHEQKNAISILRTNLEADGNYQYIKFIDNISDSIDDILTLSDIRDDKNMTEVDVSLICASVCDTYRKIYKHI
NFQFDDESNTTILAKERWIYRAISNLVDNAIKYGEGNPIEVTVKNKNNSVIVTVKDNGIGIEKDSIEKIFNNKYRINELK
KDGYGIGLSLVSHVCELCNGFVIAESELNKGSCFYLSFCEYKKTN

Sequences:

>Translated_365_residues
MYRVNIKSGLAIIIYSIILTLVLGIGIYGFKISFSKSPEKVVMDKANVYIMDNNDYQNIISFNTIKASMSKITEVGEIGS
VYENIGSKKLYMFIFMFFIVLVISSFLLWIKLSHIHDKEMKNIIKKLNVLDDNIEPDIVSKSFAMAYENVKNKFNKNLND
YKTLNSYLSHEQKNAISILRTNLEADGNYQYIKFIDNISDSIDDILTLSDIRDDKNMTEVDVSLICASVCDTYRKIYKHI
NFQFDDESNTTILAKERWIYRAISNLVDNAIKYGEGNPIEVTVKNKNNSVIVTVKDNGIGIEKDSIEKIFNNKYRINELK
KDGYGIGLSLVSHVCELCNGFVIAESELNKGSCFYLSFCEYKKTN
>Mature_365_residues
MYRVNIKSGLAIIIYSIILTLVLGIGIYGFKISFSKSPEKVVMDKANVYIMDNNDYQNIISFNTIKASMSKITEVGEIGS
VYENIGSKKLYMFIFMFFIVLVISSFLLWIKLSHIHDKEMKNIIKKLNVLDDNIEPDIVSKSFAMAYENVKNKFNKNLND
YKTLNSYLSHEQKNAISILRTNLEADGNYQYIKFIDNISDSIDDILTLSDIRDDKNMTEVDVSLICASVCDTYRKIYKHI
NFQFDDESNTTILAKERWIYRAISNLVDNAIKYGEGNPIEVTVKNKNNSVIVTVKDNGIGIEKDSIEKIFNNKYRINELK
KDGYGIGLSLVSHVCELCNGFVIAESELNKGSCFYLSFCEYKKTN

Specific function: Part of the two-component regulatory system senX3/regX3. Phosphorylates regX3 under conditions of phosphate limitation. Probably does not itself sense phosphate concentrations, which may be relayed to senX3 by the pstSCAB phosphate transporter system [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 41766; Mature: 41766

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRVNIKSGLAIIIYSIILTLVLGIGIYGFKISFSKSPEKVVMDKANVYIMDNNDYQNII
CEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEECCCCEEEEECCCCHHHH
SFNTIKASMSKITEVGEIGSVYENIGSKKLYMFIFMFFIVLVISSFLLWIKLSHIHDKEM
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
KNIIKKLNVLDDNIEPDIVSKSFAMAYENVKNKFNKNLNDYKTLNSYLSHEQKNAISILR
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
TNLEADGNYQYIKFIDNISDSIDDILTLSDIRDDKNMTEVDVSLICASVCDTYRKIYKHI
HCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
NFQFDDESNTTILAKERWIYRAISNLVDNAIKYGEGNPIEVTVKNKNNSVIVTVKDNGIG
CCEECCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCC
IEKDSIEKIFNNKYRINELKKDGYGIGLSLVSHVCELCNGFVIAESELNKGSCFYLSFCE
CCHHHHHHHHCCCEEEHHHCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEECC
YKKTN
CCCCC
>Mature Secondary Structure
MYRVNIKSGLAIIIYSIILTLVLGIGIYGFKISFSKSPEKVVMDKANVYIMDNNDYQNII
CEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEECCCCEEEEECCCCHHHH
SFNTIKASMSKITEVGEIGSVYENIGSKKLYMFIFMFFIVLVISSFLLWIKLSHIHDKEM
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
KNIIKKLNVLDDNIEPDIVSKSFAMAYENVKNKFNKNLNDYKTLNSYLSHEQKNAISILR
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
TNLEADGNYQYIKFIDNISDSIDDILTLSDIRDDKNMTEVDVSLICASVCDTYRKIYKHI
HCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
NFQFDDESNTTILAKERWIYRAISNLVDNAIKYGEGNPIEVTVKNKNNSVIVTVKDNGIG
CCEECCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCC
IEKDSIEKIFNNKYRINELKKDGYGIGLSLVSHVCELCNGFVIAESELNKGSCFYLSFCE
CCHHHHHHHHCCCEEEHHHCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEECC
YKKTN
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA