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The map label for this gene is hypA [H]

Identifier: 170757407

GI number: 170757407

Start: 910968

End: 911309

Strand: Direct

Name: hypA [H]

Synonym: CLD_3772

Alternate gene names: 170757407

Gene position: 910968-911309 (Clockwise)

Preceding gene: 170756575

Following gene: 170755041

Centisome position: 23.01

GC content: 29.53

Gene sequence:

>342_bases
TTGCATGAAGTTGGAATTATGATTGAAGTTATTAAAAATATTGAAAATTTTGCAAGAATAAATAAATTAACCAAAATAGA
TACATTAGTTCTTCAGATTGGTGAGCTCTCATCGGTAATTCCGAGATACATTGAAGCATGTTACCCAGCTGCAGTTGATG
GTACATTATTGAAAGATACAAAACTAAAAATTGAGATACTACCAGGCAATGCTATTTGCAAAAAGTGTAATAAAGTTTTT
AATCTTATTGAGAATAGTAATAAATGCCCAAATTGCGTAAGTAAAGATTGGGAGATACTATGTGGAAAAGAGTTTATGAT
TAAGGAAATCGTTGCTTTTTAA

Upstream 100 bases:

>100_bases
GAAAAAGGAAACATATAATAGCTAAAGCATTATTACAAATAAACAGATAGGAGAGTAGTTTCGCACATTCTTTATATTTT
TACAAGAGAGGTGAGGTCAT

Downstream 100 bases:

>100_bases
GAACGCATTATAAAATGATTAATATAAACAGAGTTCTTGATTTCAGAGTGAGTTGTTACTTCTACTGAAGCTTAGTCATC
GGATAAATAATAACTAGGGA

Product: hydrogenase nickel incorporation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MHEVGIMIEVIKNIENFARINKLTKIDTLVLQIGELSSVIPRYIEACYPAAVDGTLLKDTKLKIEILPGNAICKKCNKVF
NLIENSNKCPNCVSKDWEILCGKEFMIKEIVAF

Sequences:

>Translated_113_residues
MHEVGIMIEVIKNIENFARINKLTKIDTLVLQIGELSSVIPRYIEACYPAAVDGTLLKDTKLKIEILPGNAICKKCNKVF
NLIENSNKCPNCVSKDWEILCGKEFMIKEIVAF
>Mature_113_residues
MHEVGIMIEVIKNIENFARINKLTKIDTLVLQIGELSSVIPRYIEACYPAAVDGTLLKDTKLKIEILPGNAICKKCNKVF
NLIENSNKCPNCVSKDWEILCGKEFMIKEIVAF

Specific function: Probably plays a role in an hydrogenase nickel cofactor insertion step [H]

COG id: COG0375

COG function: function code R; Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hypA/hybF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000688
- InterPro:   IPR020538 [H]

Pfam domain/function: PF01155 HypA [H]

EC number: NA

Molecular weight: Translated: 12742; Mature: 12742

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHEVGIMIEVIKNIENFARINKLTKIDTLVLQIGELSSVIPRYIEACYPAAVDGTLLKDT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCC
KLKIEILPGNAICKKCNKVFNLIENSNKCPNCVSKDWEILCGKEFMIKEIVAF
EEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHHHCC
>Mature Secondary Structure
MHEVGIMIEVIKNIENFARINKLTKIDTLVLQIGELSSVIPRYIEACYPAAVDGTLLKDT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCC
KLKIEILPGNAICKKCNKVFNLIENSNKCPNCVSKDWEILCGKEFMIKEIVAF
EEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA