| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is ntpI [H]
Identifier: 170757384
GI number: 170757384
Start: 2809483
End: 2811429
Strand: Reverse
Name: ntpI [H]
Synonym: CLD_1935
Alternate gene names: 170757384
Gene position: 2811429-2809483 (Counterclockwise)
Preceding gene: 170755444
Following gene: 170754714
Centisome position: 71.03
GC content: 29.22
Gene sequence:
>1947_bases ATGAAAAAATTTACTTTATTAGCCCTTGAATCACATAAGGAATCTCTTTTTGAAGCTATGCAAAAGTTTCAAGAAGTACA GTTTGTTAACCTACAAGAAGAAAAGTCAGAAAAGTTAGAGTTTATGCAAAATGACTCTCAGTCAGAGTTGGTATCAGACT TAGAAGGTAAACAAGCTAAACTTAAATTTTGTTTAGATATTTTAGAAAGGTATGTACAAAAAGAAAAGGGACTCAAGGCT CTTATGAAGGGTAAAAAATTCATGGATTATAATGAGCTTAAAAATTTAGGTGAGAATATAGAGTGGATTAGTATTTATAA TACTTTAAGAGAAAAGGATACAAAACTTAATGCCTTAAAAAATGAAATATCTAAACCAAAAGGTGAAATAAAAGCATTGG AGCCTTGGATTAATTTTGATGAAAAAATTAGTAAGGCTAAATTTAATACTAGTACTTCTTATTTAGGGGTATTACCTTTA AATTACAAAGATGAGTTTAGAGAGACTTTTGACTCAGAGATACCAGTTTCTTATGTAGAAACTATAGGGGAAAATAAAGA TGGAGTTTATTTGTTTGTAGTATTTCATAATGATTACTTTAAAGAAACTTCGGAAGTATTAAAAAGGTATGGTTTTAGTA AAGTAGCTTTTAACTATGATGATTCTCCTAAAGAAACTATAAAAGCTTTAGAAGAAGAAATAAAGTCTATTAAAAAAGAA GAAATAAAAACTATAGAAGGAATAAAAGTATTTACTAATAAATTAGAAGATCTTCAAATAGCTTATGAGTATATTAGTTT ACAGGTTGACAGAGAAAAAGCATCTATGAATATCTTAAAAACAGATAGAATAGTGGCTATGGAAGGTTGGGTACCAGAGG AATCTATGGAAGAATTAGAAGGCTTAATAAGACAATCCGAAGGTAAGTTATATTATATAGAATTTAATGATCCTTTAGAT GAAGAAGAAGAAAAGGTTCCAATAATGTTAAAGAACAATAAGATAGTTGAGCCTTTTGAATCTATTACAGCTATGTATAG CCTTCCGAAGTATAAAGAAATAGATCCTACACCAGCTTTAGTACCTTTTTATTTAATATTCTTTGGAATGATGTTATCGG ATGCAGGTTATGGTTTAGTTATGCTTATATGTACTTTACTAGCTCTTAAAACTATACCAATGGAAAAAGCAACTAAACAA ATGATTAAGTTATTATATTACTTAAGTTATCCAACCATAGTTTGGGGCGCGCTTTATGGCAGTTATTTTGGAGGTATTAT AAACATACCGGCTATATGGGTAAAACCAGAAGATAGTGTATCATCAATTTTAATTATATCTATAGTTTTTGGTATAATTC ACCTATACACAGGACTTGGTGTAAAAGCTTATATGTTAATTAGAAACAAAAGATATAAAGATGCATTTTACGATGTAGGT TTATGGTATATAACTTTAACTACAGCTATAATTATAGTAGCTGCAAATTTCGGAAATATAACTGCATTAAATCCATACAC AAACCCTTGTAAATATATAATGTATGTAGGTATGGTAGGTTTAGTTTTAACTCAAGGTAGAGAAAACAAAACAATAGGAG CAAAACTTGGTGCAGGTTTATATGGATTATATGGTATTACAAGTTATGTAGGAGATATAGTTTCTTATTCAAGGCTTATG GCTTTGGGGCTTGCTACAGGATTTATAGGTGGAGCTTTTAACTTAATGATAAGCCTTTTAGGTAATGGAGTTAAAGCATG GATATTTGGAACATTAATATTTGTTATAGGTCACGTGTTTAATTTGCTTATAAATGCATTAGGTGCTTATGTTCACACTT GTAGATTACAGTATGTTGAATATTTCGGTAAGTTTTATGAAGGGGGAGGAAAACCATTTACTCCTTTCAAACCAAATAAT AAATACATTAACATAATAAAAGATTAG
Upstream 100 bases:
>100_bases AAATCCTTAGAAAGTATAAAAAATATTTCTAAGGATAAATTTGAAAAGGCTACAAATATAGTGATTGAGAGGATAGTGAA AGTTAATGGGAATAGCTAAG
Downstream 100 bases:
>100_bases GAGGAGTCTATTATGGAAAATATAACATTAATGAATTTTTTAACACAAAACGGAGGAGCAATATTTGCTGCTATGGGGGT AGCATTAGCGGCTATAATGC
Product: V-type ATP synthase subunit I
Products: ADP; phosphate; H+
Alternate protein names: Na(+)-translocating ATPase subunit I; V-type sodium pump subunit I [H]
Number of amino acids: Translated: 648; Mature: 648
Protein sequence:
>648_residues MKKFTLLALESHKESLFEAMQKFQEVQFVNLQEEKSEKLEFMQNDSQSELVSDLEGKQAKLKFCLDILERYVQKEKGLKA LMKGKKFMDYNELKNLGENIEWISIYNTLREKDTKLNALKNEISKPKGEIKALEPWINFDEKISKAKFNTSTSYLGVLPL NYKDEFRETFDSEIPVSYVETIGENKDGVYLFVVFHNDYFKETSEVLKRYGFSKVAFNYDDSPKETIKALEEEIKSIKKE EIKTIEGIKVFTNKLEDLQIAYEYISLQVDREKASMNILKTDRIVAMEGWVPEESMEELEGLIRQSEGKLYYIEFNDPLD EEEEKVPIMLKNNKIVEPFESITAMYSLPKYKEIDPTPALVPFYLIFFGMMLSDAGYGLVMLICTLLALKTIPMEKATKQ MIKLLYYLSYPTIVWGALYGSYFGGIINIPAIWVKPEDSVSSILIISIVFGIIHLYTGLGVKAYMLIRNKRYKDAFYDVG LWYITLTTAIIIVAANFGNITALNPYTNPCKYIMYVGMVGLVLTQGRENKTIGAKLGAGLYGLYGITSYVGDIVSYSRLM ALGLATGFIGGAFNLMISLLGNGVKAWIFGTLIFVIGHVFNLLINALGAYVHTCRLQYVEYFGKFYEGGGKPFTPFKPNN KYINIIKD
Sequences:
>Translated_648_residues MKKFTLLALESHKESLFEAMQKFQEVQFVNLQEEKSEKLEFMQNDSQSELVSDLEGKQAKLKFCLDILERYVQKEKGLKA LMKGKKFMDYNELKNLGENIEWISIYNTLREKDTKLNALKNEISKPKGEIKALEPWINFDEKISKAKFNTSTSYLGVLPL NYKDEFRETFDSEIPVSYVETIGENKDGVYLFVVFHNDYFKETSEVLKRYGFSKVAFNYDDSPKETIKALEEEIKSIKKE EIKTIEGIKVFTNKLEDLQIAYEYISLQVDREKASMNILKTDRIVAMEGWVPEESMEELEGLIRQSEGKLYYIEFNDPLD EEEEKVPIMLKNNKIVEPFESITAMYSLPKYKEIDPTPALVPFYLIFFGMMLSDAGYGLVMLICTLLALKTIPMEKATKQ MIKLLYYLSYPTIVWGALYGSYFGGIINIPAIWVKPEDSVSSILIISIVFGIIHLYTGLGVKAYMLIRNKRYKDAFYDVG LWYITLTTAIIIVAANFGNITALNPYTNPCKYIMYVGMVGLVLTQGRENKTIGAKLGAGLYGLYGITSYVGDIVSYSRLM ALGLATGFIGGAFNLMISLLGNGVKAWIFGTLIFVIGHVFNLLINALGAYVHTCRLQYVEYFGKFYEGGGKPFTPFKPNN KYINIIKD >Mature_648_residues MKKFTLLALESHKESLFEAMQKFQEVQFVNLQEEKSEKLEFMQNDSQSELVSDLEGKQAKLKFCLDILERYVQKEKGLKA LMKGKKFMDYNELKNLGENIEWISIYNTLREKDTKLNALKNEISKPKGEIKALEPWINFDEKISKAKFNTSTSYLGVLPL NYKDEFRETFDSEIPVSYVETIGENKDGVYLFVVFHNDYFKETSEVLKRYGFSKVAFNYDDSPKETIKALEEEIKSIKKE EIKTIEGIKVFTNKLEDLQIAYEYISLQVDREKASMNILKTDRIVAMEGWVPEESMEELEGLIRQSEGKLYYIEFNDPLD EEEEKVPIMLKNNKIVEPFESITAMYSLPKYKEIDPTPALVPFYLIFFGMMLSDAGYGLVMLICTLLALKTIPMEKATKQ MIKLLYYLSYPTIVWGALYGSYFGGIINIPAIWVKPEDSVSSILIISIVFGIIHLYTGLGVKAYMLIRNKRYKDAFYDVG LWYITLTTAIIIVAANFGNITALNPYTNPCKYIMYVGMVGLVLTQGRENKTIGAKLGAGLYGLYGITSYVGDIVSYSRLM ALGLATGFIGGAFNLMISLLGNGVKAWIFGTLIFVIGHVFNLLINALGAYVHTCRLQYVEYFGKFYEGGGKPFTPFKPNN KYINIIKD
Specific function: Involved in ATP-driven sodium extrusion [H]
COG id: COG1269
COG function: function code C; Archaeal/vacuolar-type H+-ATPase subunit I
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the V-ATPase 116 kDa subunit family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002490 [H]
Pfam domain/function: PF01496 V_ATPase_I [H]
EC number: 3.6.3.14
Molecular weight: Translated: 73990; Mature: 73990
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFTLLALESHKESLFEAMQKFQEVQFVNLQEEKSEKLEFMQNDSQSELVSDLEGKQAK CCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCCCCHHH LKFCLDILERYVQKEKGLKALMKGKKFMDYNELKNLGENIEWISIYNTLREKDTKLNALK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH NEISKPKGEIKALEPWINFDEKISKAKFNTSTSYLGVLPLNYKDEFRETFDSEIPVSYVE HHHCCCCCCCEEECHHCCHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCHHHHH TIGENKDGVYLFVVFHNDYFKETSEVLKRYGFSKVAFNYDDSPKETIKALEEEIKSIKKE HHCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHH EIKTIEGIKVFTNKLEDLQIAYEYISLQVDREKASMNILKTDRIVAMEGWVPEESMEELE HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHEEECCCEEEEECCCCHHHHHHHH GLIRQSEGKLYYIEFNDPLDEEEEKVPIMLKNNKIVEPFESITAMYSLPKYKEIDPTPAL HHHHCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCH VPFYLIFFGMMLSDAGYGLVMLICTLLALKTIPMEKATKQMIKLLYYLSYPTIVWGALYG HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH SYFGGIINIPAIWVKPEDSVSSILIISIVFGIIHLYTGLGVKAYMLIRNKRYKDAFYDVG HHCCCCEECCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHEEHHHHCCCHHHHHHHHH LWYITLTTAIIIVAANFGNITALNPYTNPCKYIMYVGMVGLVLTQGRENKTIGAKLGAGL HHHHHHHHHHHHEEECCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCH YGLYGITSYVGDIVSYSRLMALGLATGFIGGAFNLMISLLGNGVKAWIFGTLIFVIGHVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH NLLINALGAYVHTCRLQYVEYFGKFYEGGGKPFTPFKPNNKYINIIKD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECC >Mature Secondary Structure MKKFTLLALESHKESLFEAMQKFQEVQFVNLQEEKSEKLEFMQNDSQSELVSDLEGKQAK CCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCCCCHHH LKFCLDILERYVQKEKGLKALMKGKKFMDYNELKNLGENIEWISIYNTLREKDTKLNALK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH NEISKPKGEIKALEPWINFDEKISKAKFNTSTSYLGVLPLNYKDEFRETFDSEIPVSYVE HHHCCCCCCCEEECHHCCHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCHHHHH TIGENKDGVYLFVVFHNDYFKETSEVLKRYGFSKVAFNYDDSPKETIKALEEEIKSIKKE HHCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHH EIKTIEGIKVFTNKLEDLQIAYEYISLQVDREKASMNILKTDRIVAMEGWVPEESMEELE HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHEEECCCEEEEECCCCHHHHHHHH GLIRQSEGKLYYIEFNDPLDEEEEKVPIMLKNNKIVEPFESITAMYSLPKYKEIDPTPAL HHHHCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCH VPFYLIFFGMMLSDAGYGLVMLICTLLALKTIPMEKATKQMIKLLYYLSYPTIVWGALYG HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH SYFGGIINIPAIWVKPEDSVSSILIISIVFGIIHLYTGLGVKAYMLIRNKRYKDAFYDVG HHCCCCEECCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHEEHHHHCCCHHHHHHHHH LWYITLTTAIIIVAANFGNITALNPYTNPCKYIMYVGMVGLVLTQGRENKTIGAKLGAGL HHHHHHHHHHHHEEECCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCH YGLYGITSYVGDIVSYSRLMALGLATGFIGGAFNLMISLLGNGVKAWIFGTLIFVIGHVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH NLLINALGAYVHTCRLQYVEYFGKFYEGGGKPFTPFKPNNKYINIIKD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O; H+
Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8157629; 8144530 [H]