| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757320
Identifier: 170757320
GI number: 170757320
Start: 543555
End: 543941
Strand: Reverse
Name: 170757320
Synonym: CLD_0316
Alternate gene names: NA
Gene position: 543941-543555 (Counterclockwise)
Preceding gene: 170757690
Following gene: 170756866
Centisome position: 13.74
GC content: 29.97
Gene sequence:
>387_bases ATGTTTAATTACTGCACTACATGCTTTGTGTGTGTCCCTATGCCTATGTATCCTACAGGAACAAAACCAATGCTACCTAT GGAATATGGTCATGAAAATAAAACTAAAGAAAATGAGGCTAATTTAAAACGTTTATATCCAAAGATTTATTTTAAAATCT TTCCTTTAGTTAAAGAACATTGTGAAATAATGAAAAAGGAAAAGGGTAAGGACTATTGTCCTTCTGAGAAAGAAGTAGAT ACTGTTTGTAAAGAAATTTATAAAAGAATAAAACCTGAATTAGATGATGACGAAGATGATTACACTAGACAACGTCGTTA TAGAAGACGTCACGCTATAAATGATCTTATAAGGATAATATTTATAAGCCAACTTTTGGGTATATAA
Upstream 100 bases:
>100_bases TAAAATTAAATCTATTTTATTTTGAGACACTCTTTTATTATTAACACTTATTTATTTTATGCATAAGATAAAGTGTGTTT ATGTTATAGGAGGTTAATAA
Downstream 100 bases:
>100_bases AGATATTATGATTTTGATGATTAATATTCTTCACTAATTATCCTTTTTAAGGAACATAAAAAACACTTTCTACAAATTTA ATAAAGAGAATGTCTCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MFNYCTTCFVCVPMPMYPTGTKPMLPMEYGHENKTKENEANLKRLYPKIYFKIFPLVKEHCEIMKKEKGKDYCPSEKEVD TVCKEIYKRIKPELDDDEDDYTRQRRYRRRHAINDLIRIIFISQLLGI
Sequences:
>Translated_128_residues MFNYCTTCFVCVPMPMYPTGTKPMLPMEYGHENKTKENEANLKRLYPKIYFKIFPLVKEHCEIMKKEKGKDYCPSEKEVD TVCKEIYKRIKPELDDDEDDYTRQRRYRRRHAINDLIRIIFISQLLGI >Mature_128_residues MFNYCTTCFVCVPMPMYPTGTKPMLPMEYGHENKTKENEANLKRLYPKIYFKIFPLVKEHCEIMKKEKGKDYCPSEKEVD TVCKEIYKRIKPELDDDEDDYTRQRRYRRRHAINDLIRIIFISQLLGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15437; Mature: 15437
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 9.4 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 9.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNYCTTCFVCVPMPMYPTGTKPMLPMEYGHENKTKENEANLKRLYPKIYFKIFPLVKEH CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH CEIMKKEKGKDYCPSEKEVDTVCKEIYKRIKPELDDDEDDYTRQRRYRRRHAINDLIRII HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FISQLLGI HHHHHHCC >Mature Secondary Structure MFNYCTTCFVCVPMPMYPTGTKPMLPMEYGHENKTKENEANLKRLYPKIYFKIFPLVKEH CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH CEIMKKEKGKDYCPSEKEVDTVCKEIYKRIKPELDDDEDDYTRQRRYRRRHAINDLIRII HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FISQLLGI HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA