| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is dltD [H]
Identifier: 170757293
GI number: 170757293
Start: 68848
End: 69105
Strand: Direct
Name: dltD [H]
Synonym: CLD_0752
Alternate gene names: 170757293
Gene position: 68848-69105 (Clockwise)
Preceding gene: 170756457
Following gene: 170754427
Centisome position: 1.74
GC content: 25.19
Gene sequence:
>258_bases ATGAAATTACCTGAATATGATGATTTTAAATATCTTCTTAATACACGTAAAAGTATAGGGGTTAAATCATTATTTGCATC AGTTCCTGTTCATGGTAAGTTGTATGACTATTGTGGATTTAGCAAAGAAGATAGAAATGAATATTATAAAAAAATAAATA AAATGATTATATCTTACGGTTTTGAAATTTTAGATTTATCTCAATATGAATATGGAGAATATTATGCATTTAGTATGGGA AGGATGGTTGTATTTTGA
Upstream 100 bases:
>100_bases AACTACTAATAATGATTTTGGTATATTAAATGATTATCATGATACCCATATAAAAGAAAAAGTTTCAGGTTTAAAGGATG CATATAAGGATATATCTTAT
Downstream 100 bases:
>100_bases TGAAGCGATTGTTAAATATTATAACAACAATCGAGAGTAAAATTAAAAATAATGTGTTTTCCTCGTATTATTTTGTATGG TAATAACCTTAGGGACAACA
Product: protein DltD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MKLPEYDDFKYLLNTRKSIGVKSLFASVPVHGKLYDYCGFSKEDRNEYYKKINKMIISYGFEILDLSQYEYGEYYAFSMG RMVVF
Sequences:
>Translated_85_residues MKLPEYDDFKYLLNTRKSIGVKSLFASVPVHGKLYDYCGFSKEDRNEYYKKINKMIISYGFEILDLSQYEYGEYYAFSMG RMVVF >Mature_85_residues MKLPEYDDFKYLLNTRKSIGVKSLFASVPVHGKLYDYCGFSKEDRNEYYKKINKMIISYGFEILDLSQYEYGEYYAFSMG RMVVF
Specific function: Could be responsible for the transfer of D-alanine residues from D-Ala-undecaprenol phosphate to the poly(glycerophosphate) chains [H]
COG id: COG3966
COG function: function code M; Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006998 - InterPro: IPR007002 - InterPro: IPR006999 - InterPro: IPR013830 [H]
Pfam domain/function: PF04914 DltD_C; PF04918 DltD_M; PF04915 DltD_N [H]
EC number: NA
Molecular weight: Translated: 10147; Mature: 10147
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLPEYDDFKYLLNTRKSIGVKSLFASVPVHGKLYDYCGFSKEDRNEYYKKINKMIISYG CCCCCCCCHHHHHHCHHCCCHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHC FEILDLSQYEYGEYYAFSMGRMVVF CCEEECCCCCCCCEEEEECCCEEEC >Mature Secondary Structure MKLPEYDDFKYLLNTRKSIGVKSLFASVPVHGKLYDYCGFSKEDRNEYYKKINKMIISYG CCCCCCCCHHHHHHCHHCCCHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHC FEILDLSQYEYGEYYAFSMGRMVVF CCEEECCCCCCCCEEEEECCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377; 7797557 [H]