Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is dltD [H]

Identifier: 170757293

GI number: 170757293

Start: 68848

End: 69105

Strand: Direct

Name: dltD [H]

Synonym: CLD_0752

Alternate gene names: 170757293

Gene position: 68848-69105 (Clockwise)

Preceding gene: 170756457

Following gene: 170754427

Centisome position: 1.74

GC content: 25.19

Gene sequence:

>258_bases
ATGAAATTACCTGAATATGATGATTTTAAATATCTTCTTAATACACGTAAAAGTATAGGGGTTAAATCATTATTTGCATC
AGTTCCTGTTCATGGTAAGTTGTATGACTATTGTGGATTTAGCAAAGAAGATAGAAATGAATATTATAAAAAAATAAATA
AAATGATTATATCTTACGGTTTTGAAATTTTAGATTTATCTCAATATGAATATGGAGAATATTATGCATTTAGTATGGGA
AGGATGGTTGTATTTTGA

Upstream 100 bases:

>100_bases
AACTACTAATAATGATTTTGGTATATTAAATGATTATCATGATACCCATATAAAAGAAAAAGTTTCAGGTTTAAAGGATG
CATATAAGGATATATCTTAT

Downstream 100 bases:

>100_bases
TGAAGCGATTGTTAAATATTATAACAACAATCGAGAGTAAAATTAAAAATAATGTGTTTTCCTCGTATTATTTTGTATGG
TAATAACCTTAGGGACAACA

Product: protein DltD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MKLPEYDDFKYLLNTRKSIGVKSLFASVPVHGKLYDYCGFSKEDRNEYYKKINKMIISYGFEILDLSQYEYGEYYAFSMG
RMVVF

Sequences:

>Translated_85_residues
MKLPEYDDFKYLLNTRKSIGVKSLFASVPVHGKLYDYCGFSKEDRNEYYKKINKMIISYGFEILDLSQYEYGEYYAFSMG
RMVVF
>Mature_85_residues
MKLPEYDDFKYLLNTRKSIGVKSLFASVPVHGKLYDYCGFSKEDRNEYYKKINKMIISYGFEILDLSQYEYGEYYAFSMG
RMVVF

Specific function: Could be responsible for the transfer of D-alanine residues from D-Ala-undecaprenol phosphate to the poly(glycerophosphate) chains [H]

COG id: COG3966

COG function: function code M; Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006998
- InterPro:   IPR007002
- InterPro:   IPR006999
- InterPro:   IPR013830 [H]

Pfam domain/function: PF04914 DltD_C; PF04918 DltD_M; PF04915 DltD_N [H]

EC number: NA

Molecular weight: Translated: 10147; Mature: 10147

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLPEYDDFKYLLNTRKSIGVKSLFASVPVHGKLYDYCGFSKEDRNEYYKKINKMIISYG
CCCCCCCCHHHHHHCHHCCCHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHC
FEILDLSQYEYGEYYAFSMGRMVVF
CCEEECCCCCCCCEEEEECCCEEEC
>Mature Secondary Structure
MKLPEYDDFKYLLNTRKSIGVKSLFASVPVHGKLYDYCGFSKEDRNEYYKKINKMIISYG
CCCCCCCCHHHHHHCHHCCCHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHC
FEILDLSQYEYGEYYAFSMGRMVVF
CCEEECCCCCCCCEEEEECCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377; 7797557 [H]